Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G207700 Prunus persica HOM05D006809 ORTHO05D008609 2.2e-203 712.2 400 100.0
RcHm_v2.0_Chr7g0183371 Rosa chinensis HOM05D006809 ORTHO05D008609 2.7e-145 519.2 386 79.8
FAN13G1268 Fragaria x ananassa HOM05D006809 ORTHO05D008609 8.0e-145 517.7 386 79.0
MD06G1203600 Malus domestica HOM05D006809 ORTHO05D008609 6.8e-144 514.6 386 73.6
FAN18G0725 Fragaria x ananassa HOM05D006809 ORTHO05D008609 2.6e-143 512.7 386 78.5
FvH4_5g13570 Fragaria vesca HOM05D006809 ORTHO05D008609 1.3e-142 510.4 394 76.9
CiPaw.12G009200 Carya illinoinensis HOM05D006809 ORTHO05D008609 8.3e-142 507.7 386 78.5
Ciclev10023968m.g Citrus clementina HOM05D006809 ORTHO05D008609 1.4e-141 506.9 386 78.0
QL10p020149 Quercus lobata HOM05D006809 ORTHO05D008609 1.8e-141 506.5 385 78.2
Gohir.A07G067300 Gossypium hirsutum HOM05D006809 ORTHO05D008609 1.2e-140 503.8 386 76.9
Cfa019358 Carpinus fangiana HOM05D006809 ORTHO05D008609 2.0e-140 503.1 385 77.7
Gorai.001G076000 Gossypium raimondii HOM05D006809 ORTHO05D008609 1.0e-139 500.7 386 76.9
Thecc.03G104800 Theobroma cacao HOM05D006809 ORTHO05D008609 1.0e-139 500.7 386 76.7
Gohir.D07G071900 Gossypium hirsutum HOM05D006809 ORTHO05D008609 3.8e-139 498.8 386 76.7
FAN08G0740 Fragaria x ananassa HOM05D006809 ORTHO05D008609 5.0e-139 498.4 407 63.6
Manes.14G087700 Manihot esculenta HOM05D006809 ORTHO05D008609 1.2e-137 493.8 386 76.2
Nn4g23476 Nelumbo nucifera HOM05D006809 ORTHO05D008609 1.2e-137 493.8 386 75.4
COL.COLO4_24315 Corchorus olitorius HOM05D006809 ORTHO05D008609 4.7e-137 491.9 383 75.2
CANSAT11G1370 Cannabis sativa HOM05D006809 ORTHO05D008609 6.1e-137 491.5 386 75.1
Duzib205G0618 Durio zibethinus HOM05D006809 ORTHO05D008609 8.0e-137 491.1 386 75.4
Hma1.2p1_0060F.1_g032880 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 8.0e-137 491.1 385 75.1
PSO017G0895 Papaver somniferum HOM05D006809 ORTHO05D008609 1.5e-135 486.9 386 73.8
TAR629G2676 Trochodendron aralioides HOM05D006809 ORTHO05D008609 2.0e-135 486.5 386 75.6
CsaV3_1G006160 Cucumis sativus L. HOM05D006809 ORTHO05D008609 2.6e-135 486.1 385 73.5
PSO478G2035 Papaver somniferum HOM05D006809 ORTHO05D008609 1.3e-134 483.8 386 73.6
DCAR_010163 Daucus carota HOM05D006809 ORTHO05D008609 3.7e-134 482.3 386 74.4
CSS0043969 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 8.3e-134 481.1 386 72.8
CSS0020904 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 1.1e-133 480.7 386 72.8
MELO3C002045.2 Cucumis melo HOM05D006809 ORTHO05D008609 7.0e-133 478.0 385 72.7
TWI81G0697 Tripterygium wilfordii HOM05D006809 ORTHO05D008609 7.0e-133 478.0 386 72.3
Actinidia04809 Actinidia chinensis HOM05D006809 ORTHO05D008609 9.2e-133 477.6 386 72.5
Sed0027469 Sechium edule HOM05D006809 ORTHO05D008609 1.6e-132 476.9 385 73.0
MSTRG.11330 Avicennia marina HOM05D006809 ORTHO05D008609 1.0e-131 474.2 384 73.7
ClCG04G011640 Citrullus lanatus HOM05D006809 ORTHO05D000432 1.0e-131 474.2 399 70.9
Dinv22761 Davidia involucrata HOM05D006809 ORTHO05D008609 1.0e-131 474.2 375 76.0
Oeu014424.1 Olea europaea HOM05D006809 ORTHO05D008609 1.0e-131 474.2 384 73.7
GSVIVG01008127001 Vitis vinifera HOM05D006809 ORTHO05D008609 2.3e-131 473.0 386 73.8
HanXRQChr05g0154271 Helianthus annuus HOM05D006809 ORTHO05D008609 5.6e-130 468.4 382 72.5
Cpa.g.sc94.80 Carica papaya HOM05D006809 ORTHO05D008609 1.2e-129 467.2 373 74.8
Eucgr.K02539 Eucalyptus grandis HOM05D006809 ORTHO05D008609 2.8e-129 466.1 384 71.9
Cc11_g04700 Coffea canephora HOM05D006809 ORTHO05D008609 3.6e-129 465.7 384 61.2
Medtr2g060520 Medicago truncatula HOM05D006809 ORTHO05D008609 4.0e-128 462.2 383 71.0
PGR044G2265 Punica granatum HOM05D006809 ORTHO05D008609 1.5e-127 460.3 386 71.5
Sc12g0007330 Simmondsia chinensis HOM05D006809 ORTHO05D008609 1.4e-125 453.8 387 68.2
EL10Ac5g11165 Beta vulgaris HOM05D006809 ORTHO05D008609 2.4e-125 453.0 403 59.1
Sopen12g018840 Solanum pennellii HOM05D006809 ORTHO05D008609 1.2e-124 450.7 381 70.3
Haze_07749 Corylus avellana HOM05D006809 ORTHO05D008609 3.5e-124 449.1 389 72.8
Glyma.06G205000 Glycine max HOM05D006809 ORTHO05D008609 6.6e-123 444.9 386 69.9
Lalb_Chr07g0189231 Lupinus albus HOM05D006809 ORTHO05D008609 8.6e-123 444.5 386 70.5
VMungo1309G1606 Vigna mungo HOM05D006809 ORTHO05D008609 2.5e-122 443.0 384 69.8
Ca_02916_v3 Cicer arietinum L. HOM05D006809 ORTHO05D008609 3.3e-122 442.6 382 69.1
Lj5A134T75 Lonicera japonica HOM05D006809 ORTHO05D008609 7.3e-122 441.4 363 74.7
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 2.6e-119 433.0 379 57.5
Aqoxy3G03648 Aquilegia oxysepala HOM05D006809 ORTHO05D008609 2.6e-119 433.0 387 69.0
Lsat_1_v5_gn_5_23620 Lactuca sativa HOM05D006809 ORTHO05D008609 1.7e-118 430.3 382 64.4
arahy.Tifrunner.gnm1.ann1.23QZVI Arachis hypogaea HOM05D006809 ORTHO05D008609 4.9e-118 428.7 388 68.0
ECA246G1387 Erigeron canadensis HOM05D006809 ORTHO05D008609 1.4e-117 427.2 384 57.3
Lj1g0027663 Lotus japonicus HOM05D006809 ORTHO05D008609 4.1e-117 425.6 386 67.9
Mapoly0118s0024 Marchantia polymorpha HOM05D006809 ORTHO05D008609 5.4e-117 425.2 386 65.5
vmacro16181 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 2.7e-116 422.9 495 48.9
Rhsim08G0143500 Rhododendron simsii HOM05D006809 ORTHO05D008609 2.3e-115 419.9 519 46.6
Pp3c18_4200 Physcomitrium patens HOM05D006809 ORTHO05D008609 4.3e-114 415.6 382 54.7
CARHR274620 Cardamine hirsuta HOM05D006809 ORTHO05D008609 5.6e-114 415.2 386 65.0
AagrBONN_evm.TU.Sc2ySwM_117.1929 Anthoceros agrestis HOM05D006809 ORTHO05D008609 7.3e-114 414.8 385 54.3
Thhalv10004278m.g Eutrema salsugineum HOM05D006809 ORTHO05D008609 7.3e-114 414.8 386 65.5
Carub.0008s2163 Capsella rubella HOM05D006809 ORTHO05D008609 9.5e-114 414.5 386 65.5
Os03g0754900 Oryza sativa ssp. japonica HOM05D006809 ORTHO05D008609 2.8e-113 412.9 385 65.2
AT5G60940 Arabidopsis thaliana HOM05D006809 ORTHO05D008609 3.6e-113 412.5 386 64.0
Sp2g24250 Schrenkiella parvula HOM05D006809 ORTHO05D008609 6.8e-112 408.3 386 62.7
Aa31LG11G2360 Aethionema arabicum HOM05D006809 ORTHO05D008609 2.0e-111 406.8 386 53.4
Nitab4.5_0001723g0010 Nicotiana tabacum HOM05D006809 ORTHO05D008609 2.6e-111 406.4 411 63.5
Thecc.K0005900 Theobroma cacao HOM05D006809 ORTHO05D008609 1.7e-110 403.7 283 72.4
BcaC06g33207 Brassica carinata HOM05D006809 ORTHO05D008609 8.3e-110 401.4 387 63.8
Zm00001eb057630 Zea mays HOM05D006809 ORTHO05D008609 1.1e-109 401.0 386 63.2
Hma1.2p1_0060F.1_g032870 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 1.4e-109 400.6 390 56.7
SalBow5G3990 Salvia bowleyana HOM05D006809 ORTHO05D008609 1.9e-109 400.2 384 65.9
ATR0827G115 Amborella trichopoda HOM05D006809 ORTHO05D008609 3.2e-109 399.4 441 49.9
BraA03t13789Z Brassica rapa HOM05D006809 ORTHO05D008609 3.2e-109 399.4 387 53.2
A03p46650 Brassica napus HOM05D006809 ORTHO05D008609 7.1e-109 398.3 383 53.5
AL8G37560 Arabidopsis lyrata HOM05D006809 ORTHO05D008609 1.2e-108 397.5 386 63.2
BolC7t44995H Brassica oleracea HOM05D006809 ORTHO05D008609 1.6e-108 397.1 383 64.0
BcaNung06908 Brassica carinata HOM05D006809 ORTHO05D008609 2.7e-108 396.4 383 64.0
C07p44720 Brassica napus HOM05D006809 ORTHO05D008609 2.7e-108 396.4 383 64.0
SGA_v2.0_scaffold313G48281 Striga asiatica HOM05D006809 ORTHO05D008609 5.8e-103 378.6 390 52.3
Hund09945 Selenicereus undatus HOM05D006809 ORTHO05D008609 1.7e-102 377.1 384 53.6
Phvul.009G203000 Phaseolus vulgaris HOM05D006809 ORTHO05D008609 7.6e-95 351.7 281 64.8
Nitab4.5_0001797g0090 Nicotiana tabacum HOM05D006809 ORTHO05D008609 1.3e-94 350.9 420 56.7
SMO358G0618 Selaginella moellendorffii HOM05D006809 ORTHO05D008609 1.1e-88 331.3 382 56.5
AUR62032115 Chenopodium quinoa HOM05D006809 ORTHO05D008609 4.2e-85 319.3 384 53.4
TPR.G23013 Trifolium pratense HOM05D007385 ORTHO05D009349 5.1e-83 312.4 345 61.7
Atru.chr9.503 Acer truncatum HOM05D006809 ORTHO05D008609 6.7e-67 258.8 386 51.3
AUR62039658 Chenopodium quinoa HOM05D006809 ORTHO05D008609 1.4e-64 251.1 384 45.3
Psat1g128360 Pisum sativum HOM05D006809 ORTHO05D008609 6.9e-64 248.8 270 65.6
vmacro17627 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 6.7e-59 232.3 193 61.1
Solyc12g038527.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 1.1e-56 224.9 194 59.8
vmacro17626 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 5.3e-56 222.6 189 70.9
CDE10G1159 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 5.9e-55 219.2 219 54.3
Peaxi162Scf01223g00014 Petunia axillaris HOM05D006809 ORTHO05D008609 2.0e-47 194.1 172 59.3
PGSC0003DMG400023259 Solanum tuberosum HOM05D006809 ORTHO05D008609 7.7e-47 192.2 160 82.5
Ah.11g047540 Amaranthus hybridus HOM05D006809 ORTHO05D008609 1.1e-45 188.3 376 33.2
Haze_26316 Corylus avellana HOM05D006809 ORTHO05D008609 1.9e-45 187.6 380 34.5
Glyma.04G160301 Glycine max HOM05D006809 ORTHO05D008609 3.7e-41 173.3 147 85.0
CBR_g41384 Chara braunii HOM05D006809 ORTHO05D000002 3.5e-39 166.8 188 66.5
Psat6g135880 Pisum sativum HOM05D006809 ORTHO05D008609 8.8e-35 152.1 98 73.5
MD14G1214500 Malus domestica HOM05D006809 ORTHO05D008609 1.1e-32 145.2 90 81.1
CDE10G1173 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 1.7e-22 111.3 114 50.0
Medtr2g060475 Medicago truncatula HOM05D006809 ORTHO05D008609 5.0e-22 109.8 146 39.0
SEGI_17180 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 8.5e-22 109.0 86 64.0
SEGI_19563 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 2.8e-20 104.0 72 70.8
Solyc12g038550.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 1.0e-19 102.1 144 38.9
MD14G1214400 Malus domestica HOM05D006809 ORTHO05D008609 1.1e-16 92.0 45 86.7
Medtr6g088180 Medicago truncatula HOM05D006809 ORTHO05D008609 1.4e-16 91.7 81 59.3
CBR_g71889 Chara braunii HOM05D006809 ORTHO05D008609 1.8e-16 91.3 76 59.2
Thecc.03G286100 Theobroma cacao HOM05D006809 ORTHO05D008609 1.7e-14 84.7 50 76.0
Medtr2g061440 Medicago truncatula HOM05D002527 ORTHO05D001267 6.8e-11 72.8 40 80.0
Gohir.D03G066000 Gossypium hirsutum HOM05D003006 ORTHO05D003438 5.4e-08 63.2 233 24.9
Gorai.002G056400 Gossypium raimondii HOM05D003006 ORTHO05D003438 5.4e-08 63.2 233 24.9
Gohir.A02G123800 Gossypium hirsutum HOM05D003006 ORTHO05D003438 7.0e-08 62.8 233 24.9
QL05p027149 Quercus lobata HOM05D003006 ORTHO05D003438 7.0e-08 62.8 244 26.2
Rhsim12G0194700 Rhododendron simsii HOM05D003006 ORTHO05D003438 7.0e-08 62.8 261 26.4
Thhalv10021071m.g Eutrema salsugineum HOM05D003006 ORTHO05D003438 1.6e-07 61.6 249 23.7
BcaC07g41498 Brassica carinata HOM05D003006 ORTHO05D003438 2.7e-07 60.8 239 25.5
Thecc.06G076400 Theobroma cacao HOM05D003006 ORTHO05D003438 2.7e-07 60.8 233 25.8
Sp1g13830 Schrenkiella parvula HOM05D003006 ORTHO05D003438 4.6e-07 60.1 248 24.6
Duzib235G0973 Durio zibethinus HOM05D003006 ORTHO05D003438 5.9e-07 59.7 233 24.9
BolC5t30100H Brassica oleracea HOM05D003006 ORTHO05D003438 7.8e-07 59.3 236 25.4
COL.COLO4_12868 Corchorus olitorius HOM05D003006 ORTHO05D003438 7.8e-07 59.3 239 25.1
GSVIVG01017219001 Vitis vinifera HOM05D003006 ORTHO05D003438 7.8e-07 59.3 235 25.5
BcaC08g44014 Brassica carinata HOM05D003006 ORTHO05D003438 1.0e-06 58.9 265 23.4
A06p11540 Brassica napus HOM05D003006 ORTHO05D002838 1.0e-06 58.9 236 25.4
BraA06t24328Z Brassica rapa HOM05D003006 ORTHO05D003438 1.0e-06 58.9 236 25.4
BcaC07g41499 Brassica carinata HOM05D003006 ORTHO05D003438 1.3e-06 58.5 239 25.1
BolC8t52040H Brassica oleracea HOM05D003006 ORTHO05D003438 1.3e-06 58.5 239 25.1
Thhalv10008159m.g Eutrema salsugineum HOM05D003006 ORTHO05D003438 1.3e-06 58.5 248 23.8
BcaB03g14537 Brassica carinata HOM05D003006 ORTHO05D003438 1.7e-06 58.2 239 24.7
CSS0036684 Camellia sinensis var. sinensis HOM05D003006 ORTHO05D003438 1.7e-06 58.2 257 24.9
Thhalv10011626m.g Eutrema salsugineum HOM05D003006 ORTHO05D003438 2.3e-06 57.8 239 23.8
Manes.11G049000 Manihot esculenta HOM05D003006 ORTHO05D003438 3.0e-06 57.4 262 23.7
AT3G15610 Arabidopsis thaliana HOM05D003006 ORTHO05D003438 3.9e-06 57.0 233 23.6
Carub.0003s1536 Capsella rubella HOM05D003006 ORTHO05D003438 3.9e-06 57.0 276 23.6
Aa31LG8G2820 Aethionema arabicum HOM05D003006 ORTHO05D002838 5.0e-06 56.6 284 22.9
BcaB04g17141 Brassica carinata HOM05D003006 ORTHO05D003438 5.0e-06 56.6 233 23.6
Manes.04G118500 Manihot esculenta HOM05D003006 ORTHO05D003438 5.0e-06 56.6 239 24.7
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 6.6e-06 56.2 102 37.3
BcaC08g43447 Brassica carinata HOM05D003006 ORTHO05D003438 6.6e-06 56.2 233 24.0
C06p08180 Brassica napus HOM05D003006 ORTHO05D003438 6.6e-06 56.2 233 24.0
BolC6t35899H Brassica oleracea HOM05D003006 ORTHO05D003438 6.6e-06 56.2 233 24.0
DCAR_021326 Daucus carota HOM05D003006 ORTHO05D003438 6.6e-06 56.2 237 23.6
AL1G61050 Arabidopsis lyrata HOM05D003006 ORTHO05D003438 8.6e-06 55.8 239 23.4
CARHR042870 Cardamine hirsuta HOM05D003006 ORTHO05D003438 8.6e-06 55.8 239 23.4
Dinv38082 Davidia involucrata HOM05D003006 ORTHO05D003438 8.6e-06 55.8 243 24.7
Eucgr.F02555 Eucalyptus grandis HOM05D003006 ORTHO05D003438 8.6e-06 55.8 249 24.1
Medtr1g050340 Medicago truncatula HOM05D000836 ORTHO05D000709 8.6e-06 55.8 254 21.7


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