Gene: Solyc12g038527.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g038527.1
  • Transcript Identifier Solyc12g038527.1.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 50139253-50140534 : positive

Gene Family Information

  • ID HOM05D006809
  • #Genes/#Species 118/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g038527.1.1
  • gene_id Solyc12g038527

Descriptions

  • Description Katanin p80 WD40 repeat-containing subunit B1 homolog (AHRD V3.3 *-* A0A078HCY4_BRANA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031124
IEA
InterPromRNA 3'-end processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005848
IEA
InterPromRNA cleavage stimulating factor complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR044633 Cleavage stimulation factor subunit 1-like
Mapman id Description
16.3.1.3.3 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Stimulatory Factor (CstF) complex.component CstF50