Gene: Aa31LG8G2820
General Information
Structural Information
- Species Aethionema arabicum
- Gene Identifier Aa31LG8G2820
- Transcript Identifier Aa31LG8G2820.mRNA1
- Gene Type Coding gene
- Location LG-8 : 1201818-1207240 : negative
Gene Family Information
- ID HOM05D003006
- #Genes/#Species 229/98
- Phylogenetic origin
- ID ORTHO05D002838
- #Genes/#Species 258/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Aa31LG8G2820.mRNA1
- Alias Aa31LG8G2820
- Alias Aa31LG8G2820-mRNA-1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G15590 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G15590 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002119 | Histone H2A |
| IPR001680 | WD40 repeat |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| IPR032454 | Histone H2A, C-terminal domain |
| IPR009072 | Histone-fold |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR007125 | Histone H2A/H2B/H3 |
| Mapman id | Description |
|---|---|
| 12.1.1.1 | Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A) |
| 16.11.3.3.4.20 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (POCO) |