Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 2.3e-276 954.9 471 100.0
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 1.5e-246 855.9 472 88.6
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 2.5e-222 775.4 475 81.7
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 2.3e-215 752.3 476 79.6
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 5.4e-209 731.1 471 76.0
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 1.2e-208 729.9 478 76.8
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 6.2e-205 717.6 475 74.5
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 1.5e-203 713.0 476 74.2
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 4.9e-202 708.0 477 73.8
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 9.2e-201 703.7 477 73.0
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 1.3e-199 699.9 473 73.2
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 1.1e-198 696.8 480 72.5
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.5e-198 695.7 475 71.6
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 1.2e-195 686.8 479 71.2
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 2.0e-195 686.0 479 72.0
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 2.0e-195 686.0 478 70.5
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 3.4e-195 685.3 478 70.3
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 5.8e-195 684.5 478 71.5
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 2.9e-194 682.2 475 71.8
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 1.1e-193 680.2 471 73.2
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 9.3e-193 677.2 469 70.8
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 1.2e-192 676.8 485 69.1
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 2.3e-191 672.5 472 69.1
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 6.6e-191 671.0 478 69.5
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 1.5e-190 669.8 483 69.4
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 1.9e-190 669.5 469 70.1
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.3e-189 666.8 472 68.6
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 2.8e-189 665.6 474 70.3
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 3.6e-189 665.2 469 69.7
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 4.8e-189 664.8 472 67.8
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.4e-188 663.3 476 70.0
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 1.8e-188 662.9 472 67.4
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 2.4e-188 662.5 472 69.1
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 5.3e-188 661.4 469 70.1
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 6.9e-188 661.0 472 67.6
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 9.0e-188 660.6 472 68.0
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 2.0e-187 659.4 473 69.8
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 2.6e-187 659.1 473 69.1
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 1.3e-186 656.8 471 68.4
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 6.4e-186 654.4 473 69.1
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 6.4e-186 654.4 473 68.3
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 1.1e-185 653.7 472 67.4
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 1.1e-185 653.7 466 68.9
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 2.4e-185 652.5 471 67.3
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 2.4e-185 652.5 476 68.7
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 3.2e-185 652.1 473 66.8
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 4.2e-185 651.7 469 68.4
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 7.9e-184 647.5 478 65.9
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.8e-183 646.4 478 68.0
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 9.6e-182 640.6 477 68.8
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 8.1e-181 637.5 473 66.0
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 8.1e-181 637.5 484 65.1
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 1.4e-180 636.7 489 65.2
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 1.4e-180 636.7 483 65.6
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 1.8e-180 636.3 486 66.3
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 2.4e-180 636.0 477 66.0
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 2.4e-180 636.0 480 65.4
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 4.0e-180 635.2 485 65.8
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 4.0e-180 635.2 481 65.7
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 1.5e-179 633.3 485 64.9
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 1.5e-179 633.3 491 64.0
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 2.0e-179 632.9 485 64.3
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 9.9e-179 630.6 474 66.7
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 9.9e-179 630.6 473 65.8
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 1.7e-178 629.8 476 66.2
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 2.2e-178 629.4 483 64.6
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 2.9e-178 629.0 466 66.1
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 7.1e-177 624.4 483 64.4
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 7.9e-176 620.9 485 64.1
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 7.9e-176 620.9 483 64.2
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 1.0e-175 620.5 485 64.1
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 3.7e-173 612.1 483 63.4
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 2.2e-170 602.8 473 63.6
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 4.6e-168 595.1 478 64.0
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 6.0e-168 594.7 500 61.8
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 8.7e-167 590.9 477 60.8
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 6.5e-162 574.7 473 61.3
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 3.6e-160 568.9 481 58.8
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 4.6e-160 568.5 492 59.6
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 2.5e-158 562.8 454 60.1
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 1.7e-157 560.1 382 75.4
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 3.4e-155 552.4 445 62.0
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 7.2e-153 544.7 374 70.9
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 1.8e-140 503.4 381 63.5
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 3.1e-140 502.7 319 76.5
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 1.6e-139 500.4 338 71.9
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.6e-136 490.3 497 50.1
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 1.3e-130 470.7 316 71.2
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 2.3e-127 459.9 422 52.4
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 6.6e-122 441.8 467 47.5
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 9.5e-113 411.4 429 50.1
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 5.4e-100 369.0 274 67.9
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 9.2e-100 368.2 255 71.0
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 2.7e-99 366.7 396 46.5
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 4.3e-97 359.4 267 67.4
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 3.1e-95 353.2 401 44.9
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 1.2e-94 351.3 437 44.2
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.5e-94 350.9 359 51.8
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 9.9e-94 348.2 397 44.1
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 1.3e-93 347.8 258 66.7
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.7e-90 337.4 299 58.2
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 1.1e-87 328.2 239 66.5
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 2.6e-86 323.6 448 40.8
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 5.8e-86 322.4 319 54.2
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 9.6e-81 305.1 205 76.1
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 3.9e-74 283.1 251 59.8
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 5.1e-74 282.7 210 64.3
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 2.5e-60 237.3 236 55.1
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 2.7e-59 233.8 209 56.0
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 4.8e-56 223.0 186 65.1
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 7.4e-49 199.1 118 76.3
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 1.5e-46 191.4 118 74.6
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 3.3e-41 173.7 116 72.4
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 4.7e-35 153.3 117 65.8
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 1.7e-32 144.8 108 71.3
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 2.1e-27 127.9 99 64.6
MD06G1157100 Malus domestica HOM05D006543 ORTHO05D008308 7.2e-20 102.8 70 72.9
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 2.2e-16 91.3 204 34.3
MD06G1154400 Malus domestica HOM05D006543 ORTHO05D008308 4.8e-16 90.1 204 34.3
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 8.0e-11 72.8 44 77.3
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 5.4e-07 60.1 52 59.6
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 5.4e-07 60.1 52 59.6
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 7.0e-07 59.7 31 83.9


User provided reference genes

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