Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G086600 Prunus persica HOM05D003924 ORTHO05D005216 7.3e-53 210.3 107 100.0
Prupe.2G220200 Prunus persica HOM05D003924 ORTHO05D005216 6.7e-22 107.5 119 56.3
MD01G1113500 Malus domestica HOM05D003924 ORTHO05D005216 1.6e-20 102.8 119 54.6
Potri.010G216100 Populus trichocarpa HOM05D003924 ORTHO05D005216 6.2e-20 100.9 126 50.8
Nitab4.5_0000061g0410 Nicotiana tabacum HOM05D003924 ORTHO05D005216 8.1e-20 100.5 100 58.0
MD07G1181100 Malus domestica HOM05D003924 ORTHO05D005216 1.4e-19 99.8 118 53.4
Sabra10G0167200 Salix brachista HOM05D003924 ORTHO05D005216 1.4e-19 99.8 126 50.0
RcHm_v2.0_Chr3g0482831 Rosa chinensis HOM05D003924 ORTHO05D005216 5.3e-19 97.8 119 51.3
Haze_16947 Corylus avellana HOM05D003924 ORTHO05D005216 6.9e-19 97.4 119 52.1
Cfa001582 Carpinus fangiana HOM05D003924 ORTHO05D005216 2.6e-18 95.5 116 51.7
Gohir.D06G174100 Gossypium hirsutum HOM05D003924 ORTHO05D005216 2.6e-18 95.5 126 47.6
GSVIVG01016353001 Vitis vinifera HOM05D003924 ORTHO05D005216 2.6e-18 95.5 126 49.2
Potri.008G045400 Populus trichocarpa HOM05D003924 ORTHO05D005216 3.4e-18 95.1 126 49.2
Manes.07G101600 Manihot esculenta HOM05D003924 ORTHO05D005216 5.8e-18 94.4 122 50.0
QL08p057163 Quercus lobata HOM05D003924 ORTHO05D005216 5.8e-18 94.4 119 48.7
Ah.16g101370 Amaranthus hybridus HOM05D003924 ORTHO05D005216 7.6e-18 94.0 84 59.5
FAN12G0529 Fragaria x ananassa HOM05D003924 ORTHO05D005216 7.6e-18 94.0 123 47.2
FAN17G0927 Fragaria x ananassa HOM05D003924 ORTHO05D005216 9.9e-18 93.6 123 47.2
Glyma.09G087900 Glycine max HOM05D003924 ORTHO05D005216 1.3e-17 93.2 126 46.0
CiPaw.01G277600 Carya illinoinensis HOM05D003924 ORTHO05D005216 1.7e-17 92.8 119 49.6
FvH4_4g12630 Fragaria vesca HOM05D003924 ORTHO05D005216 1.7e-17 92.8 126 46.0
Atru.chr2.540 Acer truncatum HOM05D003924 ORTHO05D005216 2.2e-17 92.4 119 50.4
Lalb_Chr11g0073411 Lupinus albus HOM05D003924 ORTHO05D005216 2.2e-17 92.4 119 47.9
VMungo1309G1679 Vigna mungo HOM05D003924 ORTHO05D005216 2.2e-17 92.4 126 46.0
Glyma.15G194000 Glycine max HOM05D003924 ORTHO05D005216 6.4e-17 90.9 126 45.2
Gorai.010G203700 Gossypium raimondii HOM05D003924 ORTHO05D005216 6.4e-17 90.9 126 46.8
TWI15G1255 Tripterygium wilfordii HOM05D003924 ORTHO05D005216 6.4e-17 90.9 119 48.7
FAN22G0546 Fragaria x ananassa HOM05D003924 ORTHO05D005216 8.4e-17 90.5 126 45.2
TPR.G31980 Trifolium pratense HOM05D003924 ORTHO05D005216 8.4e-17 90.5 126 46.0
TAR623G0957 Trochodendron aralioides HOM05D003924 ORTHO05D005216 8.4e-17 90.5 119 50.4
FAN07G1557 Fragaria x ananassa HOM05D003924 ORTHO05D005216 1.1e-16 90.1 123 45.5
Ca_02521_v3 Cicer arietinum L. HOM05D003924 ORTHO05D005216 1.4e-16 89.7 126 46.0
Eucgr.G02792 Eucalyptus grandis HOM05D003924 ORTHO05D005216 1.4e-16 89.7 126 45.2
Sc10g0000900 Simmondsia chinensis HOM05D003924 ORTHO05D005216 1.4e-16 89.7 126 46.0
Phvul.009G216500 Phaseolus vulgaris HOM05D003924 ORTHO05D005216 1.9e-16 89.4 126 44.4
Sabra08G0031600 Salix brachista HOM05D003924 ORTHO05D005216 1.9e-16 89.4 126 46.8
Lj6g0026487 Lotus japonicus HOM05D003924 ORTHO05D005216 2.4e-16 89.0 119 47.9
Lalb_Chr08g0233271 Lupinus albus HOM05D003924 ORTHO05D005216 2.4e-16 89.0 126 45.2
PGR142G3475 Punica granatum HOM05D003924 ORTHO05D005216 3.2e-16 88.6 119 46.2
COL.COLO4_23765 Corchorus olitorius HOM05D003924 ORTHO05D005216 5.5e-16 87.8 126 44.4
Gohir.A06G179002 Gossypium hirsutum HOM05D003924 ORTHO05D005216 5.5e-16 87.8 126 45.2
Thecc.10G066000 Theobroma cacao HOM05D003924 ORTHO05D005216 5.5e-16 87.8 126 45.2
Duzib128G0369 Durio zibethinus HOM05D003924 ORTHO05D005216 7.1e-16 87.4 126 45.2
Medtr2g048630 Medicago truncatula HOM05D003924 ORTHO05D005216 7.1e-16 87.4 119 47.1
Nn2g10624 Nelumbo nucifera HOM05D003924 ORTHO05D005216 1.2e-15 86.7 126 46.8
Psat1g019320 Pisum sativum HOM05D003924 ORTHO05D005216 1.2e-15 86.7 126 45.2
Duzib106G1600 Durio zibethinus HOM05D003924 ORTHO05D005216 2.1e-15 85.9 126 43.7
ATR0810G286 Amborella trichopoda HOM05D003924 ORTHO05D005216 2.7e-15 85.5 126 45.2
Ciclev10018539m.g Citrus clementina HOM05D003924 ORTHO05D005216 2.7e-15 85.5 128 46.9
MBI19_g06147_MAGBIO Magnolia biondii HOM05D003924 ORTHO05D005216 2.7e-15 85.5 119 47.1
CSS0019567 Camellia sinensis var. sinensis HOM05D003924 ORTHO05D005216 4.6e-15 84.7 126 46.0
Dinv17348 Davidia involucrata HOM05D003924 ORTHO05D005216 4.6e-15 84.7 126 45.2
arahy.Tifrunner.gnm1.ann1.VLH7KT Arachis hypogaea HOM05D003924 ORTHO05D005216 6.0e-15 84.3 119 44.5
Rhsim03G0121600 Rhododendron simsii HOM05D003924 ORTHO05D005216 6.0e-15 84.3 119 47.9
arahy.Tifrunner.gnm1.ann1.MQZ1GR Arachis hypogaea HOM05D003924 ORTHO05D005216 1.0e-14 83.6 119 43.7
AUR62023249 Chenopodium quinoa HOM05D003924 ORTHO05D005216 1.3e-14 83.2 119 46.2
Aa31LG5G20240 Aethionema arabicum HOM05D003924 ORTHO05D005216 1.8e-14 82.8 113 46.0
PSO339G1038 Papaver somniferum HOM05D003924 ORTHO05D005216 1.8e-14 82.8 120 44.2
AUR62023203 Chenopodium quinoa HOM05D003924 ORTHO05D005216 3.0e-14 82.0 119 45.4
Peaxi162Scf01024g00323 Petunia axillaris HOM05D003924 ORTHO05D005216 3.9e-14 81.6 119 44.5
Sed0000671 Sechium edule HOM05D003924 ORTHO05D005216 3.9e-14 81.6 119 46.2
AL4G36570 Arabidopsis lyrata HOM05D003924 ORTHO05D005216 5.1e-14 81.3 124 41.9
Thhalv10016159m.g Eutrema salsugineum HOM05D003924 ORTHO05D005216 5.1e-14 81.3 124 41.1
THA.LOC104809987 Tarenaya hassleriana HOM05D003924 ORTHO05D005216 5.1e-14 81.3 124 42.7
Actinidia03018 Actinidia chinensis HOM05D003924 ORTHO05D005216 6.7e-14 80.9 119 46.2
Oeu055056.1 Olea europaea HOM05D003924 ORTHO05D005216 6.7e-14 80.9 128 42.2
Hund16198 Selenicereus undatus HOM05D003924 ORTHO05D005216 6.7e-14 80.9 119 43.7
Migut.D01216 Erythranthe guttata HOM05D003924 ORTHO05D005216 8.7e-14 80.5 119 43.7
PSO384G1475 Papaver somniferum HOM05D003924 ORTHO05D005216 8.7e-14 80.5 119 43.7
Sopen04g020010 Solanum pennellii HOM05D003924 ORTHO05D005216 8.7e-14 80.5 135 42.2
Aqoxy6G01538 Aquilegia oxysepala HOM05D003924 ORTHO05D005216 1.1e-13 80.1 126 42.1
CDE01G0014 Ceratophyllum demersum HOM05D003924 ORTHO05D005216 1.1e-13 80.1 127 44.1
SalBow1G8295 Salvia bowleyana HOM05D003924 ORTHO05D005216 1.1e-13 80.1 119 44.5
Sp4g21570 Schrenkiella parvula HOM05D003924 ORTHO05D005216 1.1e-13 80.1 124 41.1
SpUn0018_0100 Schrenkiella parvula HOM05D003924 ORTHO05D005216 1.1e-13 80.1 124 41.1
AT2G39260 Arabidopsis thaliana HOM05D003924 ORTHO05D005216 1.5e-13 79.7 124 41.1
BcaB01g03607 Brassica carinata HOM05D003924 ORTHO05D005216 1.5e-13 79.7 124 40.3
CARHR134000 Cardamine hirsuta HOM05D003924 ORTHO05D005216 1.5e-13 79.7 121 42.1
Lj8C94T13 Lonicera japonica HOM05D003924 ORTHO05D005216 1.5e-13 79.7 119 46.2
vmacro17942 Vaccinium macrocarpon HOM05D003924 ORTHO05D005216 1.5e-13 79.7 120 43.3
EL10Ac2g04495 Beta vulgaris HOM05D003924 ORTHO05D005216 1.9e-13 79.3 119 43.7
Carub.0004s2131 Capsella rubella HOM05D003924 ORTHO05D005216 1.9e-13 79.3 124 41.1
Cc09_g02440 Coffea canephora HOM05D003924 ORTHO05D005216 1.9e-13 79.3 119 43.7
Oeu033837.1 Olea europaea HOM05D003924 ORTHO05D005216 1.9e-13 79.3 119 43.7
MSTRG.9355 Avicennia marina HOM05D003924 ORTHO05D005216 2.5e-13 79.0 126 42.1
BcaB01g03658 Brassica carinata HOM05D003924 ORTHO05D005216 2.5e-13 79.0 117 41.9
A03p21980 Brassica napus HOM05D003924 ORTHO05D005216 2.5e-13 79.0 117 41.9
C03p26070 Brassica napus HOM05D003924 ORTHO05D005216 2.5e-13 79.0 117 41.9
BolC3t14991H Brassica oleracea HOM05D003924 ORTHO05D005216 2.5e-13 79.0 117 41.9
BraA03t11433Z Brassica rapa HOM05D003924 ORTHO05D005216 2.5e-13 79.0 117 41.9
Cpa.g.sc1.275 Carica papaya HOM05D003924 ORTHO05D005216 2.5e-13 79.0 127 40.9
ClCG09G020390 Citrullus lanatus HOM05D003924 ORTHO05D005216 2.5e-13 79.0 116 47.4
Nitab4.5_0000561g0080 Nicotiana tabacum HOM05D003924 ORTHO05D005216 2.5e-13 79.0 119 43.7
Hma1.2p1_3877F.1_g337880 Hydrangea macrophylla HOM05D003924 ORTHO05D005216 3.3e-13 78.6 119 45.4
CsaV3_5G026020 Cucumis sativus L. HOM05D003924 ORTHO05D005216 7.4e-13 77.4 118 44.1
Lsat_1_v5_gn_2_116140 Lactuca sativa HOM05D003924 ORTHO05D005216 9.6e-13 77.0 116 44.0
MELO3C025497.2 Cucumis melo HOM05D003924 ORTHO05D005216 1.6e-12 76.3 118 43.2
DCAR_027685 Daucus carota HOM05D003924 ORTHO05D005216 1.6e-12 76.3 119 43.7
CAN.G742.17 Capsicum annuum HOM05D003924 ORTHO05D005216 2.8e-12 75.5 135 40.7
HanXRQChr07g0200911 Helianthus annuus HOM05D003924 ORTHO05D005216 8.2e-12 73.9 116 42.2
BcaB06g29071 Brassica carinata HOM05D003924 ORTHO05D005216 1.4e-11 73.2 124 37.9
ECA238G4557 Erigeron canadensis HOM05D003924 ORTHO05D005216 3.1e-11 72.0 116 41.4
Zm00001eb185340 Zea mays HOM05D003924 ORTHO05D005216 5.3e-11 71.2 108 43.5
HanXRQChr14g0460881 Helianthus annuus HOM05D003924 ORTHO05D005216 1.5e-10 69.7 116 40.5
unitig_899.g14816 Utricularia gibba HOM05D003924 ORTHO05D005216 1.5e-10 69.7 119 41.2
HPP92_017237 Vanilla planifolia HOM05D003924 ORTHO05D005216 1.5e-10 69.7 119 42.0
SMO116G0081 Selaginella moellendorffii HOM05D003924 ORTHO05D005216 7.6e-10 67.4 119 36.1
Zm00001eb247890 Zea mays HOM05D003924 ORTHO05D005216 1.0e-09 67.0 119 39.5
Pp3c11_19990 Physcomitrium patens HOM05D003924 ORTHO05D005216 1.4e-08 63.2 116 36.2
Mapoly0202s0011 Marchantia polymorpha HOM05D003924 ORTHO05D005216 2.5e-08 62.4 119 34.5
Duzib114G0370 Durio zibethinus HOM05D003924 ORTHO05D005216 3.2e-08 62.0 55 58.2
Rhsim09G0154800 Rhododendron simsii HOM05D003924 ORTHO05D005216 1.3e-06 56.6 141 34.8
CBR_g19436 Chara braunii HOM05D003924 ORTHO05D005216 8.7e-06 53.9 118 33.1


User provided reference genes

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