Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G061200 Prunus persica HOM05D004877 ORTHO05D005942 8.8e-190 666.8 331 100.0
MD17G1186700 Malus domestica HOM05D004877 ORTHO05D005942 3.0e-166 588.6 331 86.7
MD09G1205800 Malus domestica HOM05D004877 ORTHO05D005942 8.9e-166 587.0 331 87.3
FAN14G1716 Fragaria x ananassa HOM05D004877 ORTHO05D005942 3.7e-156 555.1 333 83.5
FvH4_6g32170 Fragaria vesca HOM05D004877 ORTHO05D005942 4.9e-156 554.7 333 83.5
FAN05G1125 Fragaria x ananassa HOM05D004877 ORTHO05D005942 1.4e-155 553.1 333 82.9
RcHm_v2.0_Chr2g0140061 Rosa chinensis HOM05D004877 ORTHO05D005942 1.9e-155 552.7 333 83.5
FAN09G1375 Fragaria x ananassa HOM05D004877 ORTHO05D005942 5.0e-153 544.7 333 82.0
QL05p020530 Quercus lobata HOM05D004877 ORTHO05D005942 1.9e-152 542.7 330 80.0
CANSAT01G3179 Cannabis sativa HOM05D004877 ORTHO05D005942 1.4e-150 536.6 331 79.5
FAN02G1875 Fragaria x ananassa HOM05D004877 ORTHO05D005942 4.0e-150 535.0 333 81.1
Atru.chr1.3498 Acer truncatum HOM05D004877 ORTHO05D005942 3.7e-148 528.5 333 79.0
Thecc.06G097500 Theobroma cacao HOM05D004877 ORTHO05D005942 3.9e-145 518.5 330 77.9
CiPaw.01G232800 Carya illinoinensis HOM05D004877 ORTHO05D005942 4.3e-144 515.0 332 75.9
Manes.04G132600 Manihot esculenta HOM05D004877 ORTHO05D005942 9.5e-144 513.8 333 77.2
TWI18G0989 Tripterygium wilfordii HOM05D004877 ORTHO05D005942 6.2e-143 511.1 332 76.5
Eucgr.J02948 Eucalyptus grandis HOM05D004877 ORTHO05D005942 2.3e-142 509.2 331 75.2
Duzib235G0210 Durio zibethinus HOM05D004877 ORTHO05D005942 3.1e-142 508.8 330 76.4
Gohir.A02G118600 Gossypium hirsutum HOM05D004877 ORTHO05D005942 6.8e-142 507.7 331 76.7
VMungo1080G0916 Vigna mungo HOM05D004877 ORTHO05D005942 1.2e-141 506.9 333 76.3
Ciclev10026016m.g Citrus clementina HOM05D004877 ORTHO05D005942 5.8e-141 504.6 339 77.3
arahy.Tifrunner.gnm1.ann1.4Y1F7A Arachis hypogaea HOM05D004877 ORTHO05D005942 7.6e-141 504.2 333 74.8
Gorai.003G063100 Gossypium raimondii HOM05D004877 ORTHO05D005942 7.6e-141 504.2 331 76.4
GSVIVG01017013001 Vitis vinifera HOM05D004877 ORTHO05D005942 9.9e-141 503.8 331 76.7
CiPaw.02G146900 Carya illinoinensis HOM05D004877 ORTHO05D005942 1.7e-140 503.1 332 76.5
Glyma.15G018900 Glycine max HOM05D004877 ORTHO05D005942 2.2e-140 502.7 333 75.1
arahy.Tifrunner.gnm1.ann1.64XDM2 Arachis hypogaea HOM05D004877 ORTHO05D005942 2.9e-140 502.3 333 74.8
Medtr2g101270 Medicago truncatula HOM05D004877 ORTHO05D005942 4.9e-140 501.5 332 75.9
Lj3g0003786 Lotus japonicus HOM05D004877 ORTHO05D005942 1.1e-139 500.4 333 75.4
Phvul.005G167000 Phaseolus vulgaris HOM05D004877 ORTHO05D005942 2.4e-139 499.2 333 76.3
Duzib192G0168 Durio zibethinus HOM05D004877 ORTHO05D005942 3.2e-139 498.8 330 75.5
Gohir.D03G059200 Gossypium hirsutum HOM05D004877 ORTHO05D005942 1.2e-138 496.9 332 75.6
Glyma.13G355300 Glycine max HOM05D004877 ORTHO05D005942 6.0e-138 494.6 333 74.2
TPR.G37257 Trifolium pratense HOM05D004877 ORTHO05D005942 1.0e-137 493.8 334 74.0
Dinv37993 Davidia involucrata HOM05D004877 ORTHO05D005942 1.3e-137 493.4 337 75.4
Lalb_Chr24g0396111 Lupinus albus HOM05D004877 ORTHO05D005942 2.3e-137 492.7 333 75.4
Manes.11G035000 Manihot esculenta HOM05D004877 ORTHO05D005942 2.3e-137 492.7 333 74.2
Ca_01157_v3 Cicer arietinum L. HOM05D004877 ORTHO05D005942 3.9e-137 491.9 333 73.9
Psat5g297080 Pisum sativum HOM05D004877 ORTHO05D005942 1.1e-136 490.3 333 73.3
ClCG09G000060 Citrullus lanatus HOM05D004877 ORTHO05D005942 1.2e-135 486.9 334 73.4
PGR102G2474 Punica granatum HOM05D004877 ORTHO05D005942 2.1e-135 486.1 336 73.2
COL.COLO4_30486 Corchorus olitorius HOM05D004877 ORTHO05D005942 6.8e-134 481.1 331 74.3
Gohir.D03G059150 Gossypium hirsutum HOM05D004877 ORTHO05D005942 1.2e-133 480.3 319 76.5
Dinv30451 Davidia involucrata HOM05D004877 ORTHO05D005942 1.5e-133 479.9 338 74.3
Lalb_Chr14g0373091 Lupinus albus HOM05D004877 ORTHO05D005942 2.0e-133 479.6 333 73.0
Lj9A511G47 Lonicera japonica HOM05D004877 ORTHO05D005942 2.6e-133 479.2 342 73.4
SalBow1G2757 Salvia bowleyana HOM05D004877 ORTHO05D005942 3.4e-133 478.8 339 70.8
SalBow2G1418 Salvia bowleyana HOM05D004877 ORTHO05D005942 3.4e-133 478.8 339 70.8
Cc04_g02700 Coffea canephora HOM05D004877 ORTHO05D005942 4.4e-133 478.4 339 72.0
CsaV3_7G035410 Cucumis sativus L. HOM05D004877 ORTHO05D005942 1.3e-132 476.9 336 72.0
Sp3g14680 Schrenkiella parvula HOM05D004877 ORTHO05D005942 2.2e-132 476.1 334 70.4
Hund06654 Selenicereus undatus HOM05D004877 ORTHO05D005942 4.9e-132 474.9 331 72.2
Ah.01g005680 Amaranthus hybridus HOM05D004877 ORTHO05D005942 6.4e-132 474.6 331 71.9
AUR62022182 Chenopodium quinoa HOM05D004877 ORTHO05D005942 8.4e-132 474.2 331 71.6
AUR62031885 Chenopodium quinoa HOM05D004877 ORTHO05D005942 1.4e-131 473.4 333 71.2
Gorai.011G072600 Gossypium raimondii HOM05D004877 ORTHO05D005942 1.4e-131 473.4 329 70.5
CSS0014120 Camellia sinensis var. sinensis HOM05D004877 ORTHO05D005942 2.4e-131 472.6 334 72.8
Sc10g0007170 Simmondsia chinensis HOM05D004877 ORTHO05D005942 3.2e-131 472.2 334 71.6
MELO3C024450.2 Cucumis melo HOM05D004877 ORTHO05D005942 4.2e-131 471.9 336 70.8
Potri.001G188300 Populus trichocarpa HOM05D004877 ORTHO05D005942 1.2e-130 470.3 323 73.7
Actinidia32706 Actinidia chinensis HOM05D004877 ORTHO05D005942 4.6e-130 468.4 338 71.9
Sc10g0007240 Simmondsia chinensis HOM05D004877 ORTHO05D005942 6.0e-130 468.0 334 71.3
Thhalv10021095m.g Eutrema salsugineum HOM05D004877 ORTHO05D005942 1.7e-129 466.5 336 69.3
Sed0013882 Sechium edule HOM05D004877 ORTHO05D005942 1.7e-129 466.5 331 71.3
TAR636G0039 Trochodendron aralioides HOM05D004877 ORTHO05D005942 6.6e-129 464.5 331 68.6
Gohir.A10G066900 Gossypium hirsutum HOM05D004877 ORTHO05D005942 8.7e-129 464.2 329 69.6
THA.LOC104817965 Tarenaya hassleriana HOM05D004877 ORTHO05D005942 1.1e-128 463.8 334 69.5
Sabra01G0152700 Salix brachista HOM05D004877 ORTHO05D005942 2.8e-127 459.1 333 70.6
BcaC05g28894 Brassica carinata HOM05D004877 ORTHO05D005942 5.3e-126 454.9 334 69.2
AT3G16310 Arabidopsis thaliana HOM05D004877 ORTHO05D005942 1.5e-125 453.4 334 68.6
EL10Ac9g22101 Beta vulgaris HOM05D004877 ORTHO05D005942 7.6e-125 451.1 377 62.9
BraA05t22146Z Brassica rapa HOM05D004877 ORTHO05D005942 7.6e-125 451.1 331 68.6
Gohir.D10G068000 Gossypium hirsutum HOM05D004877 ORTHO05D005942 1.3e-124 450.3 330 68.8
MBI01_g42890_MAGBIO Magnolia biondii HOM05D004877 ORTHO05D005942 1.7e-124 449.9 337 67.7
TAR624G0319 Trochodendron aralioides HOM05D004877 ORTHO05D005942 2.2e-124 449.5 331 68.6
Hund00671 Selenicereus undatus HOM05D004877 ORTHO05D005942 6.4e-124 448.0 332 67.8
AL3G29060 Arabidopsis lyrata HOM05D004877 ORTHO05D005942 1.1e-123 447.2 334 67.7
Carub.0003s1606 Capsella rubella HOM05D004877 ORTHO05D005942 1.4e-123 446.8 335 67.2
Nitab4.5_0003167g0040 Nicotiana tabacum HOM05D004877 ORTHO05D005942 7.1e-123 444.5 338 68.3
SGA_v2.0_scaffold69G23330 Striga asiatica HOM05D004877 ORTHO05D005942 4.6e-122 441.8 338 67.5
Aa31LG8G3450 Aethionema arabicum HOM05D004877 ORTHO05D005942 1.0e-121 440.7 331 66.2
C05p50190 Brassica napus HOM05D004877 ORTHO05D005942 1.3e-121 440.3 328 67.7
BolC5t33769H Brassica oleracea HOM05D004877 ORTHO05D005942 1.3e-121 440.3 328 67.7
Sopen03g039700 Solanum pennellii HOM05D004877 ORTHO05D005942 3.0e-121 439.1 338 67.2
Nn8g39120 Nelumbo nucifera HOM05D004877 ORTHO05D005942 5.1e-121 438.3 353 63.5
Nitab4.5_0001755g0090 Nicotiana tabacum HOM05D004877 ORTHO05D005942 5.1e-121 438.3 338 67.5
PGSC0003DMG400002534 Solanum tuberosum HOM05D004877 ORTHO05D005942 5.1e-121 438.3 338 66.6
CSS0036359 Camellia sinensis var. sinensis HOM05D004877 ORTHO05D005942 8.7e-121 437.6 340 67.9
CARHR091520 Cardamine hirsuta HOM05D004877 ORTHO05D005942 1.5e-120 436.8 324 68.2
BcaB06g25724 Brassica carinata HOM05D004877 ORTHO05D005942 2.5e-120 436.0 339 67.6
Peaxi162Scf00038g00844 Petunia axillaris HOM05D004877 ORTHO05D005942 3.3e-120 435.6 341 65.4
Oeu001891.1 Olea europaea HOM05D004877 ORTHO05D005942 5.6e-120 434.9 334 66.2
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 1.6e-119 433.3 338 66.3
arahy.Tifrunner.gnm1.ann1.NE95XN Arachis hypogaea HOM05D004877 ORTHO05D005942 1.1e-118 430.6 354 63.0
arahy.Tifrunner.gnm1.ann1.WG6QSW Arachis hypogaea HOM05D004877 ORTHO05D005942 1.1e-118 430.6 354 63.0
CAN.G438.5 Capsicum annuum HOM05D004877 ORTHO05D005942 3.1e-118 429.1 339 65.2
Rhsim08G0226300 Rhododendron simsii HOM05D004877 ORTHO05D005942 9.9e-117 424.1 344 67.2
MSTRG.22647 Avicennia marina HOM05D004877 ORTHO05D005942 2.2e-116 422.9 339 63.4
Aqoxy7G01469 Aquilegia oxysepala HOM05D004877 ORTHO05D005942 4.9e-116 421.8 333 64.6
MSTRG.11036 Avicennia marina HOM05D004877 ORTHO05D005942 6.4e-116 421.4 339 66.1
Lj9A524G48 Lonicera japonica HOM05D004877 ORTHO05D005942 1.9e-115 419.9 357 65.8
DCAR_016196 Daucus carota HOM05D004877 ORTHO05D005942 4.6e-114 415.2 340 63.8
Lsat_1_v5_gn_4_99980 Lactuca sativa HOM05D004877 ORTHO05D005942 3.7e-111 405.6 357 62.5
Sed0014944 Sechium edule HOM05D004877 ORTHO05D005942 2.4e-110 402.9 331 62.8
Cpa.g.c40702 Carica papaya HOM05D004877 ORTHO05D005942 5.5e-107 391.7 261 75.9
CDE05G3078 Ceratophyllum demersum HOM05D004877 ORTHO05D005942 5.5e-107 391.7 336 61.6
PSO173G0077 Papaver somniferum HOM05D004877 ORTHO05D005942 5.7e-104 381.7 352 59.1
PSO832G2273 Papaver somniferum HOM05D004877 ORTHO05D005942 1.3e-103 380.6 352 58.2
ATR0705G205 Amborella trichopoda HOM05D004877 ORTHO05D005942 1.7e-100 370.2 350 57.4
vmacro18867 Vaccinium macrocarpon HOM05D004877 ORTHO05D005942 3.8e-100 369.0 283 67.8
CDE05G1429 Ceratophyllum demersum HOM05D004877 ORTHO05D005942 8.4e-100 367.9 333 59.2
HanXRQChr09g0275881 Helianthus annuus HOM05D004877 ORTHO05D005942 1.1e-99 367.5 360 57.5
unitig_46.g18560 Utricularia gibba HOM05D004877 ORTHO05D005942 1.1e-99 367.5 340 57.4
Haze_15830 Corylus avellana HOM05D002410 ORTHO05D002805 3.0e-97 359.4 323 61.3
unitig_37.g12259 Utricularia gibba HOM05D004877 ORTHO05D005942 4.1e-94 349.0 327 56.0
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 8.8e-89 331.3 322 56.5
TAR624G1397 Trochodendron aralioides HOM05D004877 ORTHO05D005942 2.4e-86 323.2 228 70.2
Haze_15829 Corylus avellana HOM05D004877 ORTHO05D005942 2.1e-82 310.1 264 63.3
Actinidia39142 Actinidia chinensis HOM05D004877 ORTHO05D005942 2.2e-79 300.1 245 64.9
Peaxi162Scf00894g00009 Petunia axillaris HOM05D004877 ORTHO05D005942 2.5e-75 286.6 210 69.5
HanXRQChr16g0501211 Helianthus annuus HOM05D004877 ORTHO05D005942 6.1e-74 282.0 363 48.2
Migut.I00909 Erythranthe guttata HOM05D004877 ORTHO05D005942 3.1e-70 269.6 267 58.4
arahy.Tifrunner.gnm1.ann1.XV48AZ Arachis hypogaea HOM05D004877 ORTHO05D005942 1.5e-67 260.8 188 68.6
Peaxi162Scf11517g00001 Petunia axillaris HOM05D004877 ORTHO05D005942 1.8e-65 253.8 188 69.1
SEGI_39894 Sequoiadendron giganteum HOM05D004877 ORTHO05D005942 2.4e-62 243.4 380 42.6
Mapoly0014s0033 Marchantia polymorpha HOM05D004877 ORTHO05D005942 3.8e-60 236.1 349 43.8
Pp3c5_15240 Physcomitrium patens HOM05D004877 ORTHO05D005942 5.2e-57 225.7 359 40.4
Pp3c6_16260 Physcomitrium patens HOM05D004877 ORTHO05D005942 1.4e-54 217.6 348 39.7
Os01g0200500 Oryza sativa ssp. japonica HOM05D004877 ORTHO05D005942 4.5e-53 212.6 213 55.4
Zm00001eb337990 Zea mays HOM05D004877 ORTHO05D005942 5.0e-52 209.1 345 41.4
HPP92_002859 Vanilla planifolia HOM05D004877 ORTHO05D005942 6.8e-49 198.7 225 51.6
Zm00001eb293750 Zea mays HOM05D004877 ORTHO05D005942 1.2e-45 188.0 364 37.1
SMO144G0168 Selaginella moellendorffii HOM05D004877 ORTHO05D005942 5.0e-44 182.6 174 52.3
Os05g0520100 Oryza sativa ssp. japonica HOM05D004877 ORTHO05D005942 1.0e-36 158.3 352 34.9
AagrBONN_evm.TU.Sc2ySwM_117.2493 Anthoceros agrestis HOM05D004877 ORTHO05D005942 1.5e-32 144.4 336 35.7
Nn2g11613 Nelumbo nucifera HOM05D004877 ORTHO05D005942 4.9e-31 139.4 116 62.9
Zm00001eb353450 Zea mays HOM05D004877 ORTHO05D005942 1.9e-27 127.5 352 31.2
MD16G1217600 Malus domestica HOM05D004877 ORTHO05D005942 1.6e-26 124.4 73 78.1
PSO675G8939 Papaver somniferum HOM05D004877 ORTHO05D005942 2.3e-25 120.6 139 47.5
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 3.1e-25 120.2 81 64.2
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 1.2e-24 118.2 81 63.0
SEGI_33810 Sequoiadendron giganteum HOM05D004877 ORTHO05D000002 1.7e-23 114.4 125 46.4
CBR_g44943 Chara braunii HOM05D004877 ORTHO05D005942 4.9e-23 112.8 147 44.9
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 4.9e-23 112.8 85 63.5
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 1.1e-22 111.7 106 51.9
MD07G1258000 Malus domestica HOM05D004877 ORTHO05D005942 2.1e-21 107.5 55 90.9
Nn5g29960 Nelumbo nucifera HOM05D004877 ORTHO05D005942 5.1e-20 102.8 100 55.0
Cre12.g553050 Chlamydomonas reinhardtii HOM05D004877 ORTHO05D005942 7.3e-19 99.0 149 36.9
TAR629G0138 Trochodendron aralioides HOM05D004753 ORTHO05D005920 1.5e-16 91.3 80 57.5
TAR624G1091 Trochodendron aralioides HOM05D004877 ORTHO05D005942 3.2e-14 83.6 60 68.3
PRCOL_00002288 Prasinoderma coloniale HOM05D004877 ORTHO05D005942 1.6e-13 81.3 334 25.7
Cpa.g.c43067 Carica papaya HOM05D004877 ORTHO05D005942 2.3e-12 77.4 41 87.8
Pp3c1_40780 Physcomitrium patens HOM05D004877 ORTHO05D005942 2.8e-10 70.5 163 30.1
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 4.5e-08 63.2 53 52.8
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 1.7e-07 61.2 43 62.8
ATR0019G039 Amborella trichopoda HOM05D004877 ORTHO05D005942 2.4e-06 57.4 73 49.3


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