Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G048300 Prunus persica HOM05D002835 ORTHO05D003008 8.7e-69 263.5 129 100.0
Prupe.2G048600 Prunus persica HOM05D002835 ORTHO05D003008 5.6e-15 84.7 49 75.5
CiPaw.13G017600 Carya illinoinensis HOM05D002835 ORTHO05D003008 1.5e-12 76.6 49 69.4
MD00G1152100 Malus domestica HOM05D002835 ORTHO05D003008 1.5e-12 76.6 49 71.4
QL04p022083 Quercus lobata HOM05D002835 ORTHO05D003008 1.5e-12 76.6 51 66.7
TWI63G1731 Tripterygium wilfordii HOM05D002835 ORTHO05D003008 2.0e-12 76.3 49 71.4
Glyma.11G099100 Glycine max HOM05D002835 ORTHO05D003008 2.6e-12 75.9 49 69.4
Glyma.12G025300 Glycine max HOM05D002835 ORTHO05D003008 2.6e-12 75.9 49 69.4
Phvul.011G027400 Phaseolus vulgaris HOM05D002835 ORTHO05D003008 2.6e-12 75.9 49 69.4
Atru.chr12.1228 Acer truncatum HOM05D002835 ORTHO05D003008 4.4e-12 75.1 49 71.4
Lalb_Chr19g0139471 Lupinus albus HOM05D002835 ORTHO05D003008 4.4e-12 75.1 46 71.7
MD02G1270800 Malus domestica HOM05D002835 ORTHO05D003008 4.4e-12 75.1 49 67.3
arahy.Tifrunner.gnm1.ann1.XZG5F2 Arachis hypogaea HOM05D002835 ORTHO05D003008 5.8e-12 74.7 49 67.3
SHI11341 Sapria himalayana HOM05D002640 ORTHO05D003231 5.8e-12 74.7 51 66.7
Lalb_Chr03g0024731 Lupinus albus HOM05D002835 ORTHO05D003008 7.5e-12 74.3 46 71.7
SalBow6G4288 Salvia bowleyana HOM05D002835 ORTHO05D003008 7.5e-12 74.3 49 65.3
AUR62037784 Chenopodium quinoa HOM05D002835 ORTHO05D003008 9.8e-12 73.9 49 67.3
CiPaw.14G011100 Carya illinoinensis HOM05D002835 ORTHO05D003008 1.7e-11 73.2 50 64.0
Gohir.A10G191000 Gossypium hirsutum HOM05D002835 ORTHO05D003008 2.2e-11 72.8 46 71.7
Gohir.D10G198700 Gossypium hirsutum HOM05D002835 ORTHO05D003008 2.2e-11 72.8 46 71.7
Gorai.011G222600 Gossypium raimondii HOM05D002835 ORTHO05D003008 2.2e-11 72.8 46 71.7
Sabra03G0140800 Salix brachista HOM05D002835 ORTHO05D003008 2.2e-11 72.8 51 62.7
TWI38G1269 Tripterygium wilfordii HOM05D002835 ORTHO05D003008 2.2e-11 72.8 49 67.3
VMungo1127G1778 Vigna mungo HOM05D002835 ORTHO05D003008 2.2e-11 72.8 49 65.3
ClCG11G013010 Citrullus lanatus HOM05D002835 ORTHO05D003008 2.9e-11 72.4 49 65.3
Oeu039033.2 Olea europaea HOM05D002835 ORTHO05D003008 2.9e-11 72.4 49 65.3
Potri.001G034200 Populus trichocarpa HOM05D002835 ORTHO05D003008 2.9e-11 72.4 49 63.3
Potri.003G191100 Populus trichocarpa HOM05D002835 ORTHO05D003008 2.9e-11 72.4 51 62.7
Thecc.10G136700 Theobroma cacao HOM05D002835 ORTHO05D003008 2.9e-11 72.4 49 67.3
Ah.12g060100 Amaranthus hybridus HOM05D002835 ORTHO05D003008 3.7e-11 72.0 55 60.0
PGR031G1101 Punica granatum HOM05D002835 ORTHO05D003008 3.7e-11 72.0 49 63.3
Sabra01G0024300 Salix brachista HOM05D002835 ORTHO05D003008 3.7e-11 72.0 49 63.3
SGA_v2.0_scaffold221G42693 Striga asiatica HOM05D002835 ORTHO05D003008 3.7e-11 72.0 49 61.2
SGA_v2.0_scaffold2G01033 Striga asiatica HOM05D002835 ORTHO05D003008 3.7e-11 72.0 49 63.3
AUR62042227 Chenopodium quinoa HOM05D002835 ORTHO05D003008 4.9e-11 71.6 49 65.3
Haze_02964 Corylus avellana HOM05D002835 ORTHO05D003008 4.9e-11 71.6 49 63.3
Lj9C650T3 Lonicera japonica HOM05D002835 ORTHO05D003008 4.9e-11 71.6 49 65.3
unitig_0.g1017 Utricularia gibba HOM05D002835 ORTHO05D003008 4.9e-11 71.6 46 65.2
Actinidia01694 Actinidia chinensis HOM05D002835 ORTHO05D003008 6.4e-11 71.2 49 63.3
EL10Ac2g03190 Beta vulgaris HOM05D002835 ORTHO05D003008 6.4e-11 71.2 49 63.3
MELO3C011795.2 Cucumis melo HOM05D002835 ORTHO05D003008 6.4e-11 71.2 49 63.3
CsaV3_5G029500 Cucumis sativus L. HOM05D002835 ORTHO05D003008 6.4e-11 71.2 52 59.6
Duzib106G0702 Durio zibethinus HOM05D002835 ORTHO05D003008 6.4e-11 71.2 49 67.3
SalBow5G0637 Salvia bowleyana HOM05D002835 ORTHO05D003008 6.4e-11 71.2 54 59.3
COL.COLO4_05752 Corchorus olitorius HOM05D002835 ORTHO05D003008 8.3e-11 70.9 46 69.6
Manes.04G154600 Manihot esculenta HOM05D002835 ORTHO05D003008 8.3e-11 70.9 46 69.6
Ciclev10001331m.g Citrus clementina HOM05D002835 ORTHO05D003008 1.1e-10 70.5 49 63.3
Dinv31525 Davidia involucrata HOM05D002835 ORTHO05D003008 1.1e-10 70.5 49 63.3
Lsat_1_v5_gn_7_12560 Lactuca sativa HOM05D002835 ORTHO05D003008 1.1e-10 70.5 49 63.3
MSTRG.8266 Avicennia marina HOM05D002835 ORTHO05D003008 1.4e-10 70.1 49 61.2
Thhalv10022018m.g Eutrema salsugineum HOM05D002835 ORTHO05D003008 1.4e-10 70.1 49 65.3
Hma1.2p1_0233F.1_g098250 Hydrangea macrophylla HOM05D002835 ORTHO05D003008 1.4e-10 70.1 49 61.2
Sc20g0001750 Simmondsia chinensis HOM05D002835 ORTHO05D003008 1.9e-10 69.7 49 61.2
TAR629G1403 Trochodendron aralioides HOM05D002835 ORTHO05D003008 1.9e-10 69.7 50 62.0
Dinv31988 Davidia involucrata HOM05D002835 ORTHO05D003008 2.4e-10 69.3 49 63.3
ECA248G1428 Erigeron canadensis HOM05D002835 ORTHO05D003008 2.4e-10 69.3 114 37.7
Manes.11G009300 Manihot esculenta HOM05D002835 ORTHO05D003008 2.4e-10 69.3 122 37.7
Psat7g177600 Pisum sativum HOM05D002835 ORTHO05D003008 2.4e-10 69.3 122 36.9
TPR.G17156 Trifolium pratense HOM05D002835 ORTHO05D003008 2.4e-10 69.3 122 36.1
TAR374G0026 Trochodendron aralioides HOM05D002835 ORTHO05D003008 2.4e-10 69.3 47 66.0
TAR374G0392 Trochodendron aralioides HOM05D002835 ORTHO05D003008 2.4e-10 69.3 47 66.0
CSS0008682 Camellia sinensis var. sinensis HOM05D002835 ORTHO05D003008 3.2e-10 68.9 75 48.0
Oeu009488.1 Olea europaea HOM05D002835 ORTHO05D003008 3.2e-10 68.9 49 63.3
Sed0003493 Sechium edule HOM05D002835 ORTHO05D003008 3.2e-10 68.9 49 61.2
THA.LOC104809910 Tarenaya hassleriana HOM05D002835 ORTHO05D003008 3.2e-10 68.9 49 61.2
Gohir.D06G183500 Gossypium hirsutum HOM05D002835 ORTHO05D003008 4.1e-10 68.6 49 65.3
Gorai.010G214500 Gossypium raimondii HOM05D002835 ORTHO05D003008 4.1e-10 68.6 49 65.3
Nitab4.5_0000381g0320 Nicotiana tabacum HOM05D002835 ORTHO05D003008 4.1e-10 68.6 49 61.2
Nitab4.5_0005447g0040 Nicotiana tabacum HOM05D002835 ORTHO05D003008 4.1e-10 68.6 49 61.2
Aa31sc601G10 Aethionema arabicum HOM05D002835 ORTHO05D003008 5.4e-10 68.2 49 63.3
Carub.0003s1176 Capsella rubella HOM05D002835 ORTHO05D003008 5.4e-10 68.2 49 63.3
CARHR086930 Cardamine hirsuta HOM05D002835 ORTHO05D003008 5.4e-10 68.2 46 67.4
DCAR_001965 Daucus carota HOM05D002835 ORTHO05D003008 5.4e-10 68.2 49 59.2
Medtr4g075250 Medicago truncatula HOM05D002835 ORTHO05D003008 5.4e-10 68.2 122 35.2
Ca_19009_v3 Cicer arietinum L. HOM05D002835 ORTHO05D003008 7.0e-10 67.8 122 35.2
FvH4_4g12000 Fragaria vesca HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
FAN12G0853 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
FAN12G2978 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
FAN13G2664 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
FAN17G1208 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
FAN20G0724 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
FAN22G1893 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
HanXRQChr01g0028021 Helianthus annuus HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
Lj3g0010233 Lotus japonicus HOM05D002835 ORTHO05D003008 7.0e-10 67.8 122 36.1
MBI03_g24839_MAGBIO Magnolia biondii HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
Nitab4.5_0004567g0050 Nicotiana tabacum HOM05D002835 ORTHO05D003008 7.0e-10 67.8 49 59.2
Aqoxy1G01775 Aquilegia oxysepala HOM05D002835 ORTHO05D003008 9.2e-10 67.4 49 61.2
THA.LOC104826744 Tarenaya hassleriana HOM05D002835 ORTHO05D003008 9.2e-10 67.4 43 67.4
Migut.F00759 Erythranthe guttata HOM05D002835 ORTHO05D003008 1.2e-09 67.0 46 63.0
PSO339G5002 Papaver somniferum HOM05D002835 ORTHO05D003008 1.2e-09 67.0 50 58.0
Gohir.A06G173500 Gossypium hirsutum HOM05D002835 ORTHO05D003008 1.6e-09 66.6 49 63.3
Rhsim01G0122600 Rhododendron simsii HOM05D002835 ORTHO05D003008 1.6e-09 66.6 75 44.0
PGSC0003DMG400008386 Solanum tuberosum HOM05D002835 ORTHO05D003008 1.6e-09 66.6 53 56.6
Duzib114G0429 Durio zibethinus HOM05D002835 ORTHO05D003008 2.0e-09 66.2 49 61.2
Duzib128G1841 Durio zibethinus HOM05D002835 ORTHO05D003008 2.0e-09 66.2 49 63.3
ECA236G0686 Erigeron canadensis HOM05D002835 ORTHO05D003008 2.0e-09 66.2 49 61.2
HanXRQChr12g0383231 Helianthus annuus HOM05D002835 ORTHO05D003008 2.0e-09 66.2 49 57.1
Nn1g08685 Nelumbo nucifera HOM05D002835 ORTHO05D003008 2.0e-09 66.2 50 60.0
PSO170G0785 Papaver somniferum HOM05D002835 ORTHO05D003008 2.0e-09 66.2 50 58.0
PSO170G1148 Papaver somniferum HOM05D002835 ORTHO05D003008 2.0e-09 66.2 50 58.0
PSO782G2493 Papaver somniferum HOM05D002835 ORTHO05D003008 2.0e-09 66.2 50 58.0
Peaxi162Scf00146g00068 Petunia axillaris HOM05D002835 ORTHO05D003008 2.0e-09 66.2 49 59.2
AL3G24060 Arabidopsis lyrata HOM05D002835 ORTHO05D003008 2.7e-09 65.9 46 65.2
AT3G12400 Arabidopsis thaliana HOM05D002835 ORTHO05D003008 2.7e-09 65.9 46 65.2
BcaB04g18682 Brassica carinata HOM05D002835 ORTHO05D003008 2.7e-09 65.9 46 63.0
BcaC01g04050 Brassica carinata HOM05D002835 ORTHO05D003008 2.7e-09 65.9 46 63.0
A03p37620 Brassica napus HOM05D002835 ORTHO05D003008 2.7e-09 65.9 46 63.0
C03p45610 Brassica napus HOM05D002835 ORTHO05D003008 2.7e-09 65.9 46 63.0
BolC3t16838H Brassica oleracea HOM05D002835 ORTHO05D003008 2.7e-09 65.9 46 63.0
BraA03t12916Z Brassica rapa HOM05D002835 ORTHO05D003008 2.7e-09 65.9 46 63.0
Sp3g10590 Schrenkiella parvula HOM05D002835 ORTHO05D003008 2.7e-09 65.9 46 63.0
CDE08G0623 Ceratophyllum demersum HOM05D002835 ORTHO05D003008 3.5e-09 65.5 50 60.0
Cc11_g05290 Coffea canephora HOM05D002835 ORTHO05D003008 3.5e-09 65.5 49 57.1
PSO801G0033 Papaver somniferum HOM05D002835 ORTHO05D003008 3.5e-09 65.5 50 58.0
Solyc10g085590.1 Solanum lycopersicum HOM05D002835 ORTHO05D003008 3.5e-09 65.5 50 58.0
Sopen10g035000 Solanum pennellii HOM05D002835 ORTHO05D003008 3.5e-09 65.5 50 58.0
vmacro13783 Vaccinium macrocarpon HOM05D002835 ORTHO05D003008 3.5e-09 65.5 96 38.5
Nitab4.5_0001969g0050 Nicotiana tabacum HOM05D002835 ORTHO05D003008 4.6e-09 65.1 49 57.1
Os02g0833300 Oryza sativa ssp. japonica HOM05D002835 ORTHO05D003008 4.6e-09 65.1 101 40.6
ATR0724G092 Amborella trichopoda HOM05D002835 ORTHO05D003008 6.0e-09 64.7 49 59.2
Nn2g14396 Nelumbo nucifera HOM05D002835 ORTHO05D003008 6.0e-09 64.7 46 63.0
Rhsim07G0071800 Rhododendron simsii HOM05D002835 ORTHO05D003008 6.0e-09 64.7 49 57.1
Sed0015789 Sechium edule HOM05D002835 ORTHO05D003008 6.0e-09 64.7 49 59.2
Zm00001eb259630 Zea mays HOM05D002835 ORTHO05D003008 6.0e-09 64.7 97 39.2
RcHm_v2.0_Chr4g0409601 Rosa chinensis HOM05D002835 ORTHO05D003008 7.8e-09 64.3 49 53.1
HPP92_022615 Vanilla planifolia HOM05D002835 ORTHO05D003008 1.0e-08 63.9 49 57.1
HPP92_022617 Vanilla planifolia HOM05D002835 ORTHO05D003008 1.0e-08 63.9 49 57.1
Cpa.g.sc73.6 Carica papaya HOM05D002835 ORTHO05D003008 1.3e-08 63.5 49 57.1
Peaxi162Scf00068g01814 Petunia axillaris HOM05D002835 ORTHO05D003008 1.3e-08 63.5 49 57.1
ATR0724G051 Amborella trichopoda HOM05D002835 ORTHO05D003008 2.3e-08 62.8 99 38.4
CARHR199570 Cardamine hirsuta HOM05D002835 ORTHO05D003008 2.3e-08 62.8 49 59.2
Sp6g30140 Schrenkiella parvula HOM05D002835 ORTHO05D003008 3.9e-08 62.0 46 63.0
Mapoly0030s0083 Marchantia polymorpha HOM05D002835 ORTHO05D003008 5.0e-08 61.6 46 60.9
CAN.G1099.6 Capsicum annuum HOM05D002835 ORTHO05D003008 6.6e-08 61.2 49 55.1
Solyc09g009270.2 Solanum lycopersicum HOM05D002835 ORTHO05D003008 8.6e-08 60.8 50 52.0
Sopen09g004000 Solanum pennellii HOM05D002835 ORTHO05D003008 8.6e-08 60.8 50 52.0
BcaNung04179 Brassica carinata HOM05D002835 ORTHO05D003008 1.1e-07 60.5 46 60.9
Cpa.g.sc33.161 Carica papaya HOM05D002835 ORTHO05D003008 1.1e-07 60.5 46 56.5
PGSC0003DMG400002673 Solanum tuberosum HOM05D002835 ORTHO05D003008 1.1e-07 60.5 50 52.0
Thhalv10013854m.g Eutrema salsugineum HOM05D002835 ORTHO05D003008 2.5e-07 59.3 111 38.7
AT5G13860 Arabidopsis thaliana HOM05D002835 ORTHO05D003008 3.3e-07 58.9 49 59.2
Carub.0006s1205 Capsella rubella HOM05D002835 ORTHO05D003008 3.3e-07 58.9 111 38.7
CDE02G2097 Ceratophyllum demersum HOM05D002835 ORTHO05D003008 3.3e-07 58.9 50 58.0
SMO011G0037 Selaginella moellendorffii HOM05D002835 ORTHO05D003008 3.3e-07 58.9 46 52.2
AagrBONN_evm.TU.Sc2ySwM_228.1874 Anthoceros agrestis HOM05D002835 ORTHO05D003008 4.3e-07 58.5 46 56.5
A02p02230 Brassica napus HOM05D002835 ORTHO05D003008 5.6e-07 58.2 46 58.7
C02p06470 Brassica napus HOM05D002835 ORTHO05D003008 5.6e-07 58.2 46 58.7
BolC2t06593H Brassica oleracea HOM05D002835 ORTHO05D003008 5.6e-07 58.2 46 58.7
BraA02t05195Z Brassica rapa HOM05D002835 ORTHO05D003008 5.6e-07 58.2 46 58.7
GSVIVG01018153001 Vitis vinifera HOM05D002835 ORTHO05D003008 5.6e-07 58.2 50 46.0
SGA_v2.0_scaffold80G25963 Striga asiatica HOM05D002835 ORTHO05D003008 9.5e-07 57.4 66 50.0
CDE08G1174 Ceratophyllum demersum HOM05D002835 ORTHO05D003008 1.6e-06 56.6 40 65.0
AL6G24500 Arabidopsis lyrata HOM05D002835 ORTHO05D003008 2.8e-06 55.8 93 40.9
Pp3c16_2240 Physcomitrium patens HOM05D002835 ORTHO05D003008 4.7e-06 55.1 102 33.3


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