Gene: AT3G12400

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G12400
  • Transcript Identifier AT3G12400.2
  • Gene Type Coding gene
  • Location Chr3 : 3944078-3945796 : negative

Gene Family Information

  • ID HOM05D002835
  • #Genes/#Species 245/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G12400.2
  • symbol ELC
  • uniprot Q9LHG8

Descriptions

  • Description Ubiquitin-conjugating enzyme/RWD-like protein
  • Computational description ELC; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Tumour susceptibility gene 101 (InterPro:IPR008883), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Steadiness box (InterPro:IPR017916); BEST Arabidopsis thaliana protein match is: ELCH-like (TAIR:AT5G13860.1); Has 587 Blast hits to 537 proteins in 178 species: Archae - 0; Bacteria - 3; Metazoa - 278; Fungi - 177; Plants - 63; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006464
IEA
Gene Ontologycellular protein modification process
GO:0006464
IEA
InterProcellular protein modification process
GO:0010091
IMP
Gene Ontologytrichome branching1
GO:0051301
IMP
Gene Ontologycell division1
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043130
IDA
Gene Ontologyubiquitin binding1
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0000813
ISS
Gene OntologyESCRT I complex1
GO:0005769
IEA
GOA Databaseearly endosome
GO:0005769
IDA
Gene Ontologyearly endosome1
GO:0005770
IEA
GOA Databaselate endosome
GO:0005770
IDA
Gene Ontologylate endosome1
GO:0032991
IDA
Gene Ontologyprotein-containing complex1
GO:0005768
IEA
GOA Databaseendosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008883 Ubiquitin E2 variant, N-terminal
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR037202 ESCRT assembly domain
IPR017916 Steadiness box (SB) domain
Mapman id Description
22.4.1.1.1 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-I complex.component VPS23