Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 2.3e-215 751.9 373 100.0
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 1.2e-158 563.5 372 81.2
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 1.8e-146 523.1 367 74.4
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 2.3e-146 522.7 366 73.8
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 3.0e-146 522.3 370 73.5
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 1.0e-133 480.7 319 74.9
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 1.0e-133 480.7 319 74.9
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 5.0e-133 478.4 313 76.0
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 8.5e-133 477.6 345 73.3
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 1.2e-131 473.8 289 79.2
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 3.6e-131 472.2 312 76.6
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 1.8e-130 469.9 315 75.6
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 1.2e-129 467.2 315 74.3
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 6.3e-128 461.5 314 74.2
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 1.4e-127 460.3 345 70.1
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 9.1e-127 457.6 314 73.6
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 2.0e-126 456.4 325 73.2
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 2.0e-126 456.4 324 71.0
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 5.9e-126 454.9 325 72.9
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 5.9e-126 454.9 314 73.9
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 1.0e-125 454.1 312 71.8
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 1.0e-125 454.1 323 70.3
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 1.3e-125 453.8 349 69.6
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 1.7e-125 453.4 334 68.6
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 1.7e-125 453.4 350 67.7
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 6.5e-125 451.4 360 65.3
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 8.6e-125 451.1 353 65.7
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 8.6e-125 451.1 325 72.0
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 1.1e-124 450.7 316 71.8
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 5.5e-124 448.4 342 67.8
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 2.1e-123 446.4 314 71.7
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 4.7e-123 445.3 320 70.3
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 8.0e-123 444.5 282 78.0
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 1.4e-122 443.7 314 71.3
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 1.8e-122 443.4 314 68.5
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 2.3e-122 443.0 314 68.2
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 5.2e-122 441.8 323 68.4
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 5.2e-122 441.8 323 68.4
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 2.0e-121 439.9 311 71.1
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 5.7e-121 438.3 311 70.7
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 9.8e-121 437.6 316 71.2
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 1.7e-120 436.8 336 67.6
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 2.8e-120 436.0 321 68.5
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 6.3e-120 434.9 318 68.9
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 6.3e-120 434.9 270 77.0
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 8.3e-120 434.5 274 76.3
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 8.3e-120 434.5 273 77.3
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 1.1e-119 434.1 274 77.7
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 1.4e-119 433.7 356 64.3
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 2.4e-119 433.0 327 68.5
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 3.1e-119 432.6 316 70.9
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 9.2e-119 431.0 328 67.7
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 2.7e-118 429.5 336 66.7
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 2.7e-118 429.5 315 71.4
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 3.5e-118 429.1 328 68.3
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 7.8e-118 427.9 315 71.4
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 1.3e-117 427.2 334 65.9
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 1.3e-117 427.2 322 69.9
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.7e-117 426.8 306 70.9
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 1.7e-117 426.8 352 63.9
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 2.3e-117 426.4 329 67.8
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 2.9e-117 426.0 326 66.6
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 3.8e-117 425.6 323 67.5
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 3.8e-117 425.6 321 67.3
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 3.8e-117 425.6 323 67.5
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 3.8e-117 425.6 323 67.5
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 6.6e-117 424.9 271 75.6
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 1.1e-116 424.1 329 67.5
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 2.5e-116 422.9 290 73.4
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 3.3e-116 422.5 333 64.6
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 7.3e-116 421.4 330 65.8
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 3.6e-115 419.1 326 66.0
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 3.6e-115 419.1 335 64.8
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 1.4e-114 417.2 334 64.7
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 4.0e-114 415.6 315 68.6
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 4.9e-112 408.7 311 65.9
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 6.4e-112 408.3 298 70.1
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 1.8e-111 406.8 310 67.4
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 2.4e-111 406.4 339 62.8
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 7.0e-111 404.8 324 64.2
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 7.0e-111 404.8 324 64.2
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 7.0e-111 404.8 324 64.2
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 7.0e-111 404.8 289 71.3
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 1.2e-110 404.1 348 60.9
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 2.0e-110 403.3 290 71.0
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 2.0e-110 403.3 285 71.6
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 1.1e-108 397.5 239 75.3
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 1.9e-108 396.7 314 66.2
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 1.2e-107 394.0 293 69.3
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 4.4e-105 385.6 295 66.4
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 4.4e-105 385.6 267 67.4
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 1.3e-104 384.0 318 62.6
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 2.9e-104 382.9 311 65.9
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 3.2e-103 379.4 312 62.8
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.1e-100 370.9 273 64.5
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 2.8e-99 366.3 321 60.1
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 3.6e-99 365.9 274 65.3
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 8.1e-99 364.8 272 62.9
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 8.1e-99 364.8 267 61.8
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 1.4e-98 364.0 210 82.4
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 4.0e-98 362.5 276 62.7
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 6.8e-98 361.7 221 78.7
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 1.2e-97 360.9 289 67.8
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 7.5e-97 358.2 206 82.0
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 6.4e-96 355.1 266 68.4
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 6.4e-96 355.1 299 66.2
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 1.4e-95 354.0 369 53.4
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 9.5e-92 341.3 264 65.9
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 1.3e-88 330.9 280 58.6
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 2.1e-86 323.6 350 53.4
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 3.0e-85 319.7 227 63.4
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 2.4e-82 310.1 240 59.2
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 3.8e-80 302.8 240 58.8
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 4.2e-79 299.3 233 60.1
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 1.6e-70 270.8 225 64.4
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 1.8e-69 267.3 228 62.7
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 1.8e-66 257.3 300 45.7
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 5.3e-66 255.8 213 65.3
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 9.9e-65 251.5 166 72.3
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 5.5e-63 245.7 216 55.6
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 2.1e-59 233.8 232 55.6
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 4.9e-56 222.6 187 57.2
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 7.9e-54 215.3 292 42.1
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 7.4e-52 208.8 109 90.8
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 1.8e-50 204.1 179 58.7
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 1.9e-44 184.1 119 75.6
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 6.9e-42 175.6 198 48.0
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 3.4e-41 173.3 100 81.0
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.4e-41 173.3 188 50.5
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.5e-39 167.2 188 48.9
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 7.2e-39 165.6 198 47.0
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 1.4e-37 161.4 85 87.1
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 1.8e-37 161.0 102 78.4
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.4e-34 151.4 184 45.1
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 2.4e-34 150.6 198 43.4
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 1.5e-33 147.9 97 75.3
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 9.4e-31 138.7 77 83.1
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 6.7e-29 132.5 165 49.7
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 6.7e-29 132.5 198 38.4
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 9.7e-28 128.6 211 35.5
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 4.8e-27 126.3 84 67.9
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.8e-27 126.3 175 39.4
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.4e-26 124.8 139 48.2
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.6e-25 120.6 186 37.1
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 1.5e-23 114.8 138 47.1
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.5e-20 104.8 198 32.8
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 1.6e-17 94.7 180 32.8
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 7.2e-15 85.9 198 30.8
Medtr3g063510 Medicago truncatula HOM05D004663 ORTHO05D006325 3.5e-09 67.0 57 56.1
Pp3c4_24930 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.3e-08 64.3 107 34.6
Pp3c4_1950 Physcomitrium patens HOM05D004663 ORTHO05D318537 2.9e-08 63.9 61 54.1
AUR62002800 Chenopodium quinoa HOM05D004663 ORTHO05D006325 8.6e-08 62.4 32 81.2
Medtr4g074270 Medicago truncatula HOM05D004663 ORTHO05D006325 1.6e-06 58.2 68 47.1


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