Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_23170 Physcomitrium patens HOM05D004448 ORTHO05D005919 5.0e-282 973.8 490 100.0
Pp3c15_21310 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.1e-167 594.0 486 64.6
Pp3c5_7060 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.8e-42 177.9 367 38.4
Pp3c16_1200 Physcomitrium patens HOM05D004448 ORTHO05D005919 8.5e-40 169.1 381 34.9
Pp3c27_3080 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.3e-35 155.2 370 36.5
Pp3c4_9790 Physcomitrium patens HOM05D004448 ORTHO05D005919 9.8e-20 102.4 198 36.9
Pp3c3_34250 Physcomitrium patens HOM05D004448 ORTHO05D005919 9.2e-18 95.9 284 32.4
MBI08_g34934_MAGBIO Magnolia biondii HOM05D004448 ORTHO05D005919 2.3e-16 91.3 195 33.3
Oeu024590.1 Olea europaea HOM05D004448 ORTHO05D005919 5.0e-16 90.1 204 34.3
Mapoly0070s0093 Marchantia polymorpha HOM05D004448 ORTHO05D005919 1.1e-15 89.0 222 30.2
Manes.03G032000 Manihot esculenta HOM05D004448 ORTHO05D005919 2.5e-15 87.8 234 32.9
Cpa.g.sc7.238 Carica papaya HOM05D004448 ORTHO05D005919 5.6e-15 86.7 187 29.9
Nn8g38906 Nelumbo nucifera HOM05D004448 ORTHO05D005919 2.1e-14 84.7 178 33.7
CSS0050052 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 4.0e-13 80.5 198 32.8
FAN23G3053 Fragaria x ananassa HOM05D004448 ORTHO05D005919 4.0e-13 80.5 217 28.6
Hma1.2p1_0663F.1_g198910 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 4.0e-13 80.5 247 28.7
unitig_0.g218 Utricularia gibba HOM05D004448 ORTHO05D005919 5.2e-13 80.1 225 31.6
Gohir.D08G265800 Gossypium hirsutum HOM05D004448 ORTHO05D005919 8.9e-13 79.3 186 30.6
ECA234G2909 Erigeron canadensis HOM05D004448 ORTHO05D005919 1.2e-12 79.0 184 32.1
CSS0023607 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 2.6e-12 77.8 231 29.4
SMO139G0129 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 4.4e-12 77.0 205 33.2
Gohir.D08G266000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 9.8e-12 75.9 183 30.1
Thhalv10015325m.g Eutrema salsugineum HOM05D004448 ORTHO05D005919 1.3e-11 75.5 174 34.5
SMO157G0009 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 2.2e-11 74.7 98 42.9
Aa31LG3G12720 Aethionema arabicum HOM05D004448 ORTHO05D005919 4.9e-11 73.6 173 32.4
DCAR_024685 Daucus carota HOM05D004448 ORTHO05D005919 4.9e-11 73.6 216 29.6
Dinv42301 Davidia involucrata HOM05D004448 ORTHO05D005919 4.9e-11 73.6 260 26.2
THA.LOC104813490 Tarenaya hassleriana HOM05D004448 ORTHO05D005919 4.9e-11 73.6 175 31.4
SalBow6G4094 Salvia bowleyana HOM05D004448 ORTHO05D005919 6.4e-11 73.2 177 31.1
TWI32G1061 Tripterygium wilfordii HOM05D004448 ORTHO05D005919 6.4e-11 73.2 188 31.9
Gohir.A08G245000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.1e-10 72.4 226 29.6
AagrBONN_evm.TU.Sc2ySwM_117.4075 Anthoceros agrestis HOM05D004448 ORTHO05D005919 1.9e-10 71.6 207 26.6
RhsimUnG0189000 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.9e-10 71.6 206 29.6
Actinidia25266 Actinidia chinensis HOM05D004448 ORTHO05D005919 2.4e-10 71.2 198 29.8
CDE09G0006 Ceratophyllum demersum HOM05D004448 ORTHO05D005919 2.4e-10 71.2 194 26.3
Lsat_1_v5_gn_5_145680 Lactuca sativa HOM05D004448 ORTHO05D005919 2.4e-10 71.2 187 31.6
COL.COLO4_18221 Corchorus olitorius HOM05D004448 ORTHO05D005919 3.2e-10 70.9 247 30.8
FAN26G2794 Fragaria x ananassa HOM05D004448 ORTHO05D005919 3.2e-10 70.9 220 27.7
Duzib168G0645 Durio zibethinus HOM05D004448 ORTHO05D005919 4.1e-10 70.5 279 30.1
VMungo0464G0625 Vigna mungo HOM05D005189 ORTHO05D006093 4.1e-10 70.5 199 28.6
FAN19G1271 Fragaria x ananassa HOM05D004448 ORTHO05D005919 5.4e-10 70.1 285 26.3
HanXRQChr12g0354731 Helianthus annuus HOM05D004448 ORTHO05D005919 7.0e-10 69.7 182 32.4
vmacro17218 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 7.0e-10 69.7 247 28.3
vmacro22686 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 7.0e-10 69.7 247 28.3
AL8G32620 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 9.2e-10 69.3 206 30.6
Dinv36750 Davidia involucrata HOM05D004448 ORTHO05D005919 9.2e-10 69.3 181 31.5
Hund06702 Selenicereus undatus HOM05D004448 ORTHO05D005919 9.2e-10 69.3 189 29.6
Ah.14g085380 Amaranthus hybridus HOM05D004448 ORTHO05D005919 1.2e-09 68.9 186 29.0
Aqoxy5G03492 Aquilegia oxysepala HOM05D004448 ORTHO05D005919 1.2e-09 68.9 179 32.4
Phvul.004G171600 Phaseolus vulgaris HOM05D004448 ORTHO05D005919 1.2e-09 68.9 190 28.9
TPR.G40396 Trifolium pratense HOM05D004448 ORTHO05D005919 1.6e-09 68.6 175 32.0
BcaB08g36059 Brassica carinata HOM05D004448 ORTHO05D005919 2.0e-09 68.2 173 31.8
Peaxi162Scf00175g00047 Petunia axillaris HOM05D004448 ORTHO05D005919 2.0e-09 68.2 183 32.8
Sp6g18520 Schrenkiella parvula HOM05D004448 ORTHO05D005919 2.0e-09 68.2 210 30.5
Carub.0008s1726 Capsella rubella HOM05D004448 ORTHO05D005919 2.7e-09 67.8 211 30.3
Migut.J00591 Erythranthe guttata HOM05D004448 ORTHO05D005919 2.7e-09 67.8 199 30.2
RcHm_v2.0_Chr2g0093041 Rosa chinensis HOM05D004448 ORTHO05D005919 2.7e-09 67.8 242 26.9
CANSAT56G0950 Cannabis sativa HOM05D004448 ORTHO05D005919 3.5e-09 67.4 236 27.1
CARHR270530 Cardamine hirsuta HOM05D004448 ORTHO05D005919 3.5e-09 67.4 183 29.0
Gohir.A08G244900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 3.5e-09 67.4 179 31.3
AT5G56780 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 4.6e-09 67.0 201 30.3
BcaC04g20054 Brassica carinata HOM05D004448 ORTHO05D005919 4.6e-09 67.0 173 31.8
C09p48340 Brassica napus HOM05D004448 ORTHO05D005919 4.6e-09 67.0 173 31.8
BolC9t57684H Brassica oleracea HOM05D004448 ORTHO05D005919 4.6e-09 67.0 173 31.8
CBR_g29538 Chara braunii HOM05D004448 ORTHO05D005919 7.8e-09 66.2 128 30.5
Nitab4.5_0004087g0010 Nicotiana tabacum HOM05D004448 ORTHO05D005919 7.8e-09 66.2 241 28.6
Ciclev10010615m.g Citrus clementina HOM05D004448 ORTHO05D005919 1.0e-08 65.9 261 26.1
Zm00001eb325970 Zea mays HOM05D004448 ORTHO05D005919 1.3e-08 65.5 209 29.7
Nitab4.5_0000713g0030 Nicotiana tabacum HOM05D004448 ORTHO05D005919 1.7e-08 65.1 206 31.1
Sc18g0001910 Simmondsia chinensis HOM05D004448 ORTHO05D005919 2.3e-08 64.7 179 30.7
BcaC02g12705 Brassica carinata HOM05D004448 ORTHO05D005919 3.0e-08 64.3 172 27.3
Sabra06G0118700 Salix brachista HOM05D004448 ORTHO05D005919 3.0e-08 64.3 220 30.5
BcaC02g12506 Brassica carinata HOM05D004448 ORTHO05D005919 3.9e-08 63.9 213 26.8
Nitab4.5_0000938g0020 Nicotiana tabacum HOM05D004448 ORTHO05D005919 3.9e-08 63.9 242 28.1
Sopen07g011050 Solanum pennellii HOM05D004448 ORTHO05D005919 3.9e-08 63.9 238 28.2
A10p14110 Brassica napus HOM05D004448 ORTHO05D005919 5.0e-08 63.5 204 30.4
BraA10t43502Z Brassica rapa HOM05D004448 ORTHO05D005919 6.6e-08 63.2 204 30.4
EL10Ac8g19309 Beta vulgaris HOM05D004448 ORTHO05D005919 8.6e-08 62.8 212 28.8
Cc06_g11170 Coffea canephora HOM05D004448 ORTHO05D005919 8.6e-08 62.8 272 26.8
FvH4_1g07151 Fragaria vesca HOM05D004448 ORTHO05D005919 8.6e-08 62.8 235 25.1
PGR142G4073 Punica granatum HOM05D004448 ORTHO05D005919 8.6e-08 62.8 177 28.2
FAN26G0987 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.1e-07 62.4 226 26.1
BraA05t19157Z Brassica rapa HOM05D004448 ORTHO05D005919 1.5e-07 62.0 177 29.4
C04p01820 Brassica napus HOM05D004448 ORTHO05D005919 1.9e-07 61.6 175 25.1
Eucgr.C00913 Eucalyptus grandis HOM05D004448 ORTHO05D005919 2.5e-07 61.2 264 28.4
Atru.chr7.1561 Acer truncatum HOM05D004448 ORTHO05D005919 3.3e-07 60.8 229 24.9
Gohir.A08G245100 Gossypium hirsutum HOM05D004448 ORTHO05D005919 3.3e-07 60.8 61 42.6
A05p01610 Brassica napus HOM05D004448 ORTHO05D005919 4.3e-07 60.5 177 29.4
Rhsim05G0022900 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.3e-07 60.5 237 27.4
AUR62031324 Chenopodium quinoa HOM05D004448 ORTHO05D005919 5.6e-07 60.1 233 26.6
Prupe.7G212600 Prunus persica HOM05D004448 ORTHO05D005919 5.6e-07 60.1 216 26.9
Solyc07g021550.3 Solanum lycopersicum HOM05D004448 ORTHO05D005919 5.6e-07 60.1 241 27.0
vmacro06280 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 9.5e-07 59.3 196 29.6
Thecc.09G092200 Theobroma cacao HOM05D004448 ORTHO05D005919 1.6e-06 58.5 258 29.8
FvH4_1g07150 Fragaria vesca HOM05D004448 ORTHO05D005919 2.1e-06 58.2 259 25.1
arahy.Tifrunner.gnm1.ann1.6Q96ZG Arachis hypogaea HOM05D004448 ORTHO05D005919 3.6e-06 57.4 232 27.2
arahy.Tifrunner.gnm1.ann1.LLR3FQ Arachis hypogaea HOM05D004448 ORTHO05D005919 4.7e-06 57.0 227 28.6
AUR62027409 Chenopodium quinoa HOM05D004448 ORTHO05D005919 4.7e-06 57.0 241 26.6


User provided reference genes

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