Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 0.0e+00 1276.5 703 100.0
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 2.1e-60 238.0 549 35.3
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 2.3e-54 218.0 627 31.6
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 1.9e-45 188.3 275 40.4
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 4.3e-45 187.2 273 39.9
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 4.3e-45 187.2 273 39.9
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 8.2e-44 183.0 275 39.6
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 5.3e-43 180.3 315 36.2
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 5.3e-43 180.3 315 36.2
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 1.2e-42 179.1 311 37.0
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 1.5e-42 178.7 324 36.7
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 2.0e-42 178.3 358 33.8
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 2.6e-42 177.9 311 36.3
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 3.4e-42 177.6 312 38.1
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 5.9e-42 176.8 316 37.0
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 1.3e-41 175.6 278 40.3
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 1.7e-41 175.3 290 36.6
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 2.2e-41 174.9 276 38.0
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 2.2e-41 174.9 281 39.9
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 3.8e-41 174.1 291 36.4
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 5.0e-41 173.7 311 35.7
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 6.5e-41 173.3 277 36.1
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 6.5e-41 173.3 288 37.8
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 8.5e-41 172.9 280 38.9
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 1.1e-40 172.6 288 36.8
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 1.1e-40 172.6 279 40.1
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 1.4e-40 172.2 277 36.5
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 1.4e-40 172.2 276 37.7
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 1.4e-40 172.2 378 33.9
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 1.9e-40 171.8 273 38.8
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 1.9e-40 171.8 405 33.1
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 2.5e-40 171.4 276 37.7
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 2.5e-40 171.4 313 35.8
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 3.2e-40 171.0 278 40.3
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 5.5e-40 170.2 322 35.4
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 5.5e-40 170.2 274 38.0
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 7.2e-40 169.9 327 34.9
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 1.6e-39 168.7 409 33.0
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 1.6e-39 168.7 329 34.0
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 4.6e-39 167.2 277 38.3
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 6.1e-39 166.8 404 32.9
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 7.9e-39 166.4 236 41.9
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 7.9e-39 166.4 315 35.6
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 1.4e-38 165.6 322 34.2
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 1.8e-38 165.2 490 30.4
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 1.8e-38 165.2 249 38.6
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 1.8e-38 165.2 281 37.7
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 2.3e-38 164.9 315 35.2
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 2.3e-38 164.9 273 37.4
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 3.0e-38 164.5 349 32.1
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 3.9e-38 164.1 388 32.2
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 5.1e-38 163.7 276 38.4
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 6.7e-38 163.3 281 37.4
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 8.8e-38 162.9 273 35.2
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 1.1e-37 162.5 279 35.5
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 1.5e-37 162.2 278 36.7
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 2.6e-37 161.4 318 35.5
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 2.6e-37 161.4 275 36.7
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 4.4e-37 160.6 279 36.9
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 5.7e-37 160.2 461 29.3
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 5.7e-37 160.2 277 35.4
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 1.7e-36 158.7 490 30.2
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 1.7e-36 158.7 301 33.9
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 2.2e-36 158.3 281 35.9
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 6.3e-36 156.8 321 33.3
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 8.2e-36 156.4 287 35.2
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 8.2e-36 156.4 437 30.4
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 8.2e-36 156.4 302 33.8
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 8.2e-36 156.4 373 31.6
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 8.2e-36 156.4 290 33.1
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 2.4e-35 154.8 263 37.6
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 9.1e-35 152.9 454 28.9
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 1.5e-34 152.1 273 35.5
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 2.6e-34 151.4 302 34.4
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 3.4e-34 151.0 317 34.1
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 5.9e-34 150.2 462 29.0
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 5.9e-34 150.2 462 29.0
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 1.1e-32 146.0 309 32.4
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 4.7e-31 140.6 336 29.8
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 4.7e-31 140.6 289 33.2
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 7.9e-31 139.8 268 35.4
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 5.2e-30 137.1 518 28.2
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 4.4e-29 134.0 426 27.7
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 4.8e-28 130.6 400 28.5
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 6.3e-28 130.2 312 29.8
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 8.2e-28 129.8 534 26.6
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 2.4e-27 128.3 279 32.3
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 1.2e-26 125.9 294 31.0
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.6e-26 125.6 276 34.4
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 6.5e-25 120.2 248 33.1
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 1.0e-22 112.8 191 39.3
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.4e-22 112.5 288 30.2
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 1.1e-16 92.8 163 37.4
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 1.5e-16 92.4 207 33.8
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 2.5e-16 91.7 99 50.5
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 7.2e-16 90.1 233 32.2
Cpa.g.sc35.79 Carica papaya HOM05D007081 ORTHO05D008834 7.2e-16 90.1 124 46.0
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.8e-14 85.5 130 33.8
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.2e-13 82.8 132 37.1
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.2e-13 82.8 132 37.1
HPP92_000304 Vanilla planifolia HOM05D007081 ORTHO05D008834 3.4e-13 81.3 99 45.5
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 2.2e-12 78.6 113 37.2
SEGI_21151 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 1.9e-08 65.5 71 47.9
SMO367G0074 Selaginella moellendorffii HOM05D005384 ORTHO05D006477 2.5e-08 65.1 116 36.2
Potri.004G081800 Populus trichocarpa HOM05D005384 ORTHO05D006477 3.2e-08 64.7 116 32.8
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 4.2e-08 64.3 53 52.8
Potri.017G138500 Populus trichocarpa HOM05D005384 ORTHO05D006477 4.2e-08 64.3 116 33.6
Sabra04G0054400 Salix brachista HOM05D005384 ORTHO05D006477 7.2e-08 63.5 116 32.8
Actinidia22110 Actinidia chinensis HOM05D005384 ORTHO05D006477 6.1e-07 60.5 102 38.2
ATR0743G115 Amborella trichopoda HOM05D005384 ORTHO05D006477 1.0e-06 59.7 134 35.1
C08p29480 Brassica napus HOM05D005384 ORTHO05D006477 1.8e-06 58.9 115 32.2
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 1.8e-06 58.9 120 30.0
AT3G54230 Arabidopsis thaliana HOM05D005384 ORTHO05D006477 3.0e-06 58.2 119 33.6
A09p47220 Brassica napus HOM05D005384 ORTHO05D006477 3.0e-06 58.2 115 32.2
BraA09t40184Z Brassica rapa HOM05D005384 ORTHO05D006477 3.0e-06 58.2 115 32.2
Ciclev10010959m.g Citrus clementina HOM05D005384 ORTHO05D006477 3.0e-06 58.2 192 29.7
Thhalv10010093m.g Eutrema salsugineum HOM05D005384 ORTHO05D006477 3.0e-06 58.2 118 33.1
Glyma.08G266700 Glycine max HOM05D005384 ORTHO05D006477 3.0e-06 58.2 121 33.1
Glyma.16G102300 Glycine max HOM05D005384 ORTHO05D006477 4.0e-06 57.8 121 33.1
ECA246G0264 Erigeron canadensis HOM05D005384 ORTHO05D006477 5.2e-06 57.4 154 27.9
Eucgr.J01644 Eucalyptus grandis HOM05D005384 ORTHO05D006477 5.2e-06 57.4 123 31.7
Sp5g08170 Schrenkiella parvula HOM05D005384 ORTHO05D006477 5.2e-06 57.4 118 33.1
BcaNung06989 Brassica carinata HOM05D005384 ORTHO05D006477 6.8e-06 57.0 262 25.2
BolC8t50551H Brassica oleracea HOM05D005384 ORTHO05D006477 6.8e-06 57.0 262 25.2
CARHR164150 Cardamine hirsuta HOM05D005384 ORTHO05D006477 6.8e-06 57.0 119 32.8
Peaxi162Scf00084g00818 Petunia axillaris HOM05D005384 ORTHO05D006477 6.8e-06 57.0 153 28.8
Phvul.003G273500 Phaseolus vulgaris HOM05D005384 ORTHO05D006477 8.8e-06 56.6 121 33.1
VMungo0251G2756 Vigna mungo HOM05D005384 ORTHO05D006477 8.8e-06 56.6 121 33.1


User provided reference genes

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