Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 9.3e-170 600.1 305 100.0
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.9e-50 203.8 251 43.0
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 1.1e-48 198.0 248 40.7
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 1.0e-46 191.4 249 39.4
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 1.0e-46 191.4 254 40.2
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 1.3e-46 191.0 247 40.1
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 2.2e-46 190.3 247 41.7
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 3.8e-46 189.5 249 38.6
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.1e-45 188.0 250 38.8
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 1.1e-45 188.0 251 39.0
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 1.4e-45 187.6 250 39.6
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.9e-45 187.2 248 39.5
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 2.5e-45 186.8 251 38.2
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 4.2e-45 186.0 253 37.9
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 4.2e-45 186.0 253 40.7
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.6e-44 184.1 251 39.0
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 1.6e-44 184.1 233 42.5
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 2.1e-44 183.7 253 37.5
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 2.1e-44 183.7 245 40.0
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.0e-43 181.4 209 46.4
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.8e-43 180.6 249 39.8
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.8e-43 180.6 249 39.8
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 1.8e-43 180.6 247 38.9
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 3.0e-43 179.9 302 35.8
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 3.0e-43 179.9 249 38.2
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 5.1e-43 179.1 245 38.4
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 5.1e-43 179.1 246 38.6
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 8.7e-43 178.3 251 37.8
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 8.7e-43 178.3 248 36.3
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.1e-42 177.9 224 40.2
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 1.1e-42 177.9 248 37.1
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.1e-42 177.9 253 37.2
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 1.1e-42 177.9 253 37.2
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 1.5e-42 177.6 238 39.5
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.9e-42 177.2 247 37.2
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 1.9e-42 177.2 248 35.5
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 4.3e-42 176.0 250 36.8
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 5.7e-42 175.6 244 35.7
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 9.7e-42 174.9 246 36.6
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 9.7e-42 174.9 250 36.4
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 1.3e-41 174.5 259 36.7
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 1.3e-41 174.5 247 38.1
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 1.7e-41 174.1 247 36.0
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 1.7e-41 174.1 247 36.0
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.7e-41 174.1 253 36.4
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 1.7e-41 174.1 245 37.6
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 2.2e-41 173.7 247 36.8
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 2.2e-41 173.7 248 38.7
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 2.2e-41 173.7 247 36.4
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 2.8e-41 173.3 247 36.0
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 2.8e-41 173.3 244 38.1
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 3.7e-41 172.9 245 37.6
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 6.3e-41 172.2 247 36.0
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 1.4e-40 171.0 246 38.6
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 1.4e-40 171.0 267 36.7
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 1.4e-40 171.0 267 36.7
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 1.4e-40 171.0 267 34.5
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 1.8e-40 170.6 250 36.0
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 2.4e-40 170.2 173 48.6
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 2.4e-40 170.2 251 36.7
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 3.1e-40 169.9 247 36.4
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 3.1e-40 169.9 251 35.9
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 5.3e-40 169.1 249 35.7
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 6.9e-40 168.7 223 39.9
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 6.9e-40 168.7 248 35.9
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 9.1e-40 168.3 247 36.0
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 9.1e-40 168.3 251 36.3
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.5e-39 167.5 184 41.8
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 3.4e-39 166.4 247 36.8
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 3.4e-39 166.4 254 35.0
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 3.4e-39 166.4 241 37.3
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 5.9e-39 165.6 247 35.6
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 5.9e-39 165.6 247 36.0
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.0e-38 164.9 249 33.7
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 1.3e-38 164.5 241 35.7
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 1.7e-38 164.1 249 38.6
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 1.7e-38 164.1 259 37.5
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 2.9e-38 163.3 251 37.8
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 3.8e-38 162.9 225 37.3
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 5.0e-38 162.5 250 37.2
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 5.0e-38 162.5 250 37.2
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 6.5e-38 162.2 249 32.9
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 6.5e-38 162.2 247 36.4
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 1.1e-37 161.4 239 36.0
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 3.2e-37 159.8 219 36.5
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 3.2e-37 159.8 245 32.7
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 4.2e-37 159.5 259 32.8
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 5.5e-37 159.1 240 32.9
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 7.2e-37 158.7 253 32.4
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 2.7e-36 156.8 218 38.5
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 3.6e-36 156.4 180 41.1
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 4.6e-36 156.0 250 36.0
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 1.8e-35 154.1 234 34.6
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 2.3e-35 153.7 251 35.1
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 3.0e-35 153.3 175 42.3
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 7.4e-34 148.7 320 30.0
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 9.7e-34 148.3 242 37.6
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 2.2e-33 147.1 184 37.5
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 5.9e-31 139.0 207 40.6
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 3.8e-30 136.3 295 30.2
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 6.5e-30 135.6 171 43.3
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 8.0e-28 128.6 262 31.7
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 5.7e-26 122.5 151 43.0
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 3.7e-25 119.8 131 46.6
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 6.3e-25 119.0 168 36.9
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.0e-22 111.7 184 35.9
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.0e-19 101.7 154 35.7
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 8.2e-17 92.0 133 33.8
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 6.5e-14 82.4 108 40.7
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.1e-12 77.4 119 32.8
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 6.1e-12 75.9 134 33.6
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 1.5e-10 71.2 123 30.1
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.5e-10 71.2 115 40.0
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 4.4e-10 69.7 169 26.6
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 9.8e-10 68.6 99 40.4
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 1.7e-09 67.8 117 32.5
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 6.3e-09 65.9 119 31.1
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 5.0e-06 56.2 58 46.6


User provided reference genes

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