Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 0.0e+00 2380.5 1197 100.0
Pp3c13_14750 Physcomitrium patens HOM05D005579 ORTHO05D006775 4.5e-50 204.5 310 40.0
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 5.1e-38 164.5 282 34.8
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 2.0e-34 152.5 301 33.2
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 7.7e-34 150.6 574 27.9
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 1.3e-33 149.8 585 26.2
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.9e-33 148.7 572 27.3
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 5.0e-33 147.9 227 38.3
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 6.5e-33 147.5 580 26.7
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 8.5e-33 147.1 599 26.9
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 1.4e-32 146.4 225 35.6
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 3.2e-32 145.2 225 34.7
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.2e-32 144.8 576 26.4
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 7.2e-32 144.1 576 28.3
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 9.4e-32 143.7 225 35.1
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 1.2e-31 143.3 225 36.4
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 2.1e-31 142.5 318 30.8
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 2.7e-31 142.1 224 34.8
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 2.7e-31 142.1 256 33.2
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 3.6e-31 141.7 228 32.0
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 3.6e-31 141.7 228 36.8
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 3.6e-31 141.7 225 35.1
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 6.1e-31 141.0 228 31.6
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 6.1e-31 141.0 329 30.4
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 7.9e-31 140.6 233 33.0
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 1.0e-30 140.2 222 33.3
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.4e-30 139.8 242 36.0
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 1.4e-30 139.8 606 26.4
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 1.4e-30 139.8 329 30.4
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 1.8e-30 139.4 270 30.4
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 3.9e-30 138.3 294 31.6
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 3.9e-30 138.3 331 31.4
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 3.9e-30 138.3 240 34.2
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 5.1e-30 137.9 260 32.3
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 5.1e-30 137.9 223 32.7
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 5.1e-30 137.9 233 32.6
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 5.1e-30 137.9 226 33.6
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 6.7e-30 137.5 241 35.3
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 8.8e-30 137.1 241 34.9
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 8.8e-30 137.1 241 34.9
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 8.8e-30 137.1 234 35.0
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 1.1e-29 136.7 252 34.9
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 1.1e-29 136.7 225 34.2
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 1.5e-29 136.3 294 31.6
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 1.5e-29 136.3 226 32.7
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 2.6e-29 135.6 236 32.2
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 2.6e-29 135.6 591 26.4
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 3.3e-29 135.2 223 32.3
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 4.4e-29 134.8 310 30.6
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 7.4e-29 134.0 698 22.9
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 1.3e-28 133.3 225 32.4
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 1.3e-28 133.3 622 23.2
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 1.7e-28 132.9 219 37.4
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 2.2e-28 132.5 236 32.6
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 2.8e-28 132.1 315 30.2
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 2.8e-28 132.1 317 31.5
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 3.7e-28 131.7 251 32.7
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 3.7e-28 131.7 225 33.8
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 3.7e-28 131.7 297 30.0
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 3.7e-28 131.7 624 24.7
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 4.8e-28 131.3 241 34.0
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 6.3e-28 131.0 596 24.5
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 6.3e-28 131.0 596 24.5
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 6.3e-28 131.0 234 31.6
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 8.2e-28 130.6 769 26.0
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 1.1e-27 130.2 265 30.6
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 1.1e-27 130.2 229 34.5
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 1.8e-27 129.4 241 33.2
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 2.4e-27 129.0 252 32.9
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 2.4e-27 129.0 231 34.6
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 3.1e-27 128.6 225 33.8
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 4.1e-27 128.3 228 33.8
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 4.1e-27 128.3 226 35.0
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 5.3e-27 127.9 265 32.8
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 1.2e-26 126.7 225 33.3
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 1.5e-26 126.3 756 23.8
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 2.0e-26 125.9 250 30.4
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 2.0e-26 125.9 617 22.9
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 4.5e-26 124.8 279 31.5
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 2.2e-25 122.5 238 31.5
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 2.9e-25 122.1 279 29.7
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 5.0e-25 121.3 228 33.3
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 6.5e-25 120.9 225 32.4
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 6.5e-25 120.9 225 32.4
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 6.5e-25 120.9 235 32.3
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 8.5e-25 120.6 228 33.3
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 1.1e-24 120.2 225 32.0
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 1.9e-24 119.4 238 32.4
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 3.2e-24 118.6 347 28.0
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 4.2e-24 118.2 279 31.2
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 4.2e-24 118.2 225 32.4
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 5.5e-24 117.9 238 32.8
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 7.2e-24 117.5 225 31.6
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 1.2e-23 116.7 319 28.8
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 2.7e-23 115.5 225 31.1
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 6.1e-23 114.4 225 30.2
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 1.4e-22 113.2 255 30.6
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 3.0e-22 112.1 225 30.2
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 1.8e-19 102.8 605 22.6
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 2.0e-18 99.4 601 22.5
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.0e-17 97.1 302 29.1
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 7.5e-13 80.9 125 35.2
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 1.3e-12 80.1 207 29.5
SEGI_30883 Sequoiadendron giganteum HOM05D005579 ORTHO05D006775 2.0e-10 72.8 134 33.6
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 7.7e-10 70.9 118 34.7
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 1.5e-08 66.6 160 32.5
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 4.7e-07 61.6 108 31.5
CDE08G0179 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 2.3e-06 59.3 146 30.1
Hund11748 Selenicereus undatus HOM05D005579 ORTHO05D006775 8.8e-06 57.4 239 28.5


User provided reference genes

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