Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_13830 Physcomitrium patens HOM05D006350 ORTHO05D007850 6.5e-57 223.8 109 100.0
TWI63G1388 Tripterygium wilfordii HOM05D006350 ORTHO05D007850 2.9e-12 75.5 103 44.7
DCAR_008125 Daucus carota HOM05D006350 ORTHO05D007850 3.7e-12 75.1 103 45.6
Os07g0530100 Oryza sativa ssp. japonica HOM05D006350 ORTHO05D007850 3.7e-12 75.1 104 44.2
Zm00001eb323120 Zea mays HOM05D006350 ORTHO05D007850 4.9e-12 74.7 104 46.2
Cpa.g.sc198.9 Carica papaya HOM05D006350 ORTHO05D007850 8.3e-12 73.9 104 44.2
Dinv17831 Davidia involucrata HOM05D006350 ORTHO05D007850 1.1e-11 73.6 106 42.5
Nitab4.5_0002613g0020 Nicotiana tabacum HOM05D006350 ORTHO05D007850 1.4e-11 73.2 104 43.3
Nn1g03636 Nelumbo nucifera HOM05D006350 ORTHO05D007850 1.9e-11 72.8 109 40.4
RcHm_v2.0_Chr5g0003961 Rosa chinensis HOM05D006350 ORTHO05D007850 2.4e-11 72.4 105 42.9
SGA_v2.0_scaffold114G32022 Striga asiatica HOM05D006350 ORTHO05D007850 2.4e-11 72.4 104 44.2
MSTRG.15966 Avicennia marina HOM05D006350 ORTHO05D007850 3.2e-11 72.0 104 45.2
Mapoly0129s0047 Marchantia polymorpha HOM05D006350 ORTHO05D007850 3.2e-11 72.0 117 38.5
Oeu051224.2 Olea europaea HOM05D006350 ORTHO05D007850 3.2e-11 72.0 104 41.3
CSS0007285 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 4.1e-11 71.6 105 46.7
CSS0026996 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 4.1e-11 71.6 105 46.7
Rhsim02G0112000 Rhododendron simsii HOM05D006350 ORTHO05D007850 4.1e-11 71.6 107 40.2
Sopen03g005680 Solanum pennellii HOM05D006350 ORTHO05D007850 4.1e-11 71.6 101 44.6
CANSAT80G1390 Cannabis sativa HOM05D006350 ORTHO05D007850 5.4e-11 71.2 102 40.2
FvH4_3g02650 Fragaria vesca HOM05D006350 ORTHO05D007850 5.4e-11 71.2 103 43.7
MD10G1314700 Malus domestica HOM05D006350 ORTHO05D007850 7.0e-11 70.9 103 42.7
CAN.G404.6 Capsicum annuum HOM05D006350 ORTHO05D007850 9.2e-11 70.5 104 42.3
ClCG01G022180 Citrullus lanatus HOM05D006350 ORTHO05D007850 9.2e-11 70.5 105 43.8
PSO541G3631 Papaver somniferum HOM05D006350 ORTHO05D007850 9.2e-11 70.5 104 42.3
AT5G15170 Arabidopsis thaliana HOM05D006350 ORTHO05D007850 1.6e-10 69.7 111 37.8
Peaxi162Scf00521g00815 Petunia axillaris HOM05D006350 ORTHO05D007850 1.6e-10 69.7 104 41.3
THA.LOC104821036 Tarenaya hassleriana HOM05D006350 ORTHO05D007850 1.6e-10 69.7 112 42.9
Carub.0006s1334 Capsella rubella HOM05D006350 ORTHO05D007850 2.0e-10 69.3 108 41.7
Ciclev10014587m.g Citrus clementina HOM05D006350 ORTHO05D007850 2.0e-10 69.3 106 39.6
CsaV3_6G049260 Cucumis sativus L. HOM05D006350 ORTHO05D007850 2.0e-10 69.3 108 42.6
PSO675G5568 Papaver somniferum HOM05D006350 ORTHO05D007850 2.0e-10 69.3 104 43.3
Migut.M01281 Erythranthe guttata HOM05D006350 ORTHO05D007850 2.7e-10 68.9 100 45.0
FAN21G3377 Fragaria x ananassa HOM05D006350 ORTHO05D007850 2.7e-10 68.9 103 42.7
FAN25G1413 Fragaria x ananassa HOM05D006350 ORTHO05D007850 2.7e-10 68.9 103 42.7
Sed0019871 Sechium edule HOM05D006350 ORTHO05D007850 2.7e-10 68.9 106 45.3
GSVIVG01012630001 Vitis vinifera HOM05D006350 ORTHO05D007850 2.7e-10 68.9 104 41.3
Phvul.002G048900 Phaseolus vulgaris HOM05D006350 ORTHO05D007850 3.5e-10 68.6 105 41.9
Prupe.4G026100 Prunus persica HOM05D006350 ORTHO05D007850 3.5e-10 68.6 103 42.7
SMO117G0269 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 3.5e-10 68.6 125 39.2
Solyc03g031820.4 Solanum lycopersicum HOM05D006350 ORTHO05D007850 3.5e-10 68.6 101 43.6
Eucgr.D00813 Eucalyptus grandis HOM05D006350 ORTHO05D007850 4.6e-10 68.2 107 41.1
Dinv20017 Davidia involucrata HOM05D006350 ORTHO05D007850 7.8e-10 67.4 103 43.7
vmacro15831 Vaccinium macrocarpon HOM05D006350 ORTHO05D007850 7.8e-10 67.4 111 39.6
VMungo1215G2459 Vigna mungo HOM05D006350 ORTHO05D007850 7.8e-10 67.4 105 41.0
Medtr7g050860 Medicago truncatula HOM05D006350 ORTHO05D007850 1.0e-09 67.0 104 37.5
Sp6g28900 Schrenkiella parvula HOM05D006350 ORTHO05D007850 1.0e-09 67.0 105 40.0
EL10Ac8g19892 Beta vulgaris HOM05D006350 ORTHO05D007850 1.3e-09 66.6 114 37.7
Ca_07431_v3 Cicer arietinum L. HOM05D006350 ORTHO05D007850 1.3e-09 66.6 104 38.5
TAR629G2651 Trochodendron aralioides HOM05D006350 ORTHO05D007850 1.3e-09 66.6 105 41.9
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 1.7e-09 66.2 108 38.9
CARHR198140 Cardamine hirsuta HOM05D006350 ORTHO05D007850 1.7e-09 66.2 109 38.5
AUR62012643 Chenopodium quinoa HOM05D006350 ORTHO05D007850 1.7e-09 66.2 104 40.4
AL6G25990 Arabidopsis lyrata HOM05D006350 ORTHO05D007850 2.3e-09 65.9 106 38.7
BcaB01g05074 Brassica carinata HOM05D006350 ORTHO05D007850 2.3e-09 65.9 106 39.6
SEGI_36047 Sequoiadendron giganteum HOM05D006350 ORTHO05D007850 2.3e-09 65.9 108 41.7
Thecc.06G214100 Theobroma cacao HOM05D006350 ORTHO05D007850 2.3e-09 65.9 107 41.1
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 3.0e-09 65.5 106 39.6
BolC3t13297H Brassica oleracea HOM05D006350 ORTHO05D007850 3.0e-09 65.5 106 39.6
Cc02_g11700 Coffea canephora HOM05D006350 ORTHO05D007850 3.0e-09 65.5 104 40.4
COL.COLO4_31726 Corchorus olitorius HOM05D006350 ORTHO05D007850 3.0e-09 65.5 107 40.2
Glyma.04G064300 Glycine max HOM05D006350 ORTHO05D007850 3.0e-09 65.5 111 37.8
Nitab4.5_0000091g0460 Nicotiana tabacum HOM05D006350 ORTHO05D007850 3.0e-09 65.5 101 40.6
arahy.Tifrunner.gnm1.ann1.SC0FBD Arachis hypogaea HOM05D006350 ORTHO05D007850 3.9e-09 65.1 99 42.4
HanXRQChr16g0504561 Helianthus annuus HOM05D006350 ORTHO05D007850 3.9e-09 65.1 120 38.3
QL05p075148 Quercus lobata HOM05D006350 ORTHO05D007850 3.9e-09 65.1 124 37.1
Aa31LG11G14390 Aethionema arabicum HOM05D006350 ORTHO05D007850 5.0e-09 64.7 118 38.1
arahy.Tifrunner.gnm1.ann1.QV9JTX Arachis hypogaea HOM05D006350 ORTHO05D007850 5.0e-09 64.7 99 42.4
Lj1g0012123 Lotus japonicus HOM05D006350 ORTHO05D007850 5.0e-09 64.7 105 40.0
QL93p0073_0722 Quercus lobata HOM05D006350 ORTHO05D007850 5.0e-09 64.7 124 37.1
Thhalv10012972m.g Eutrema salsugineum HOM05D006350 ORTHO05D007850 1.1e-08 63.5 105 42.9
MBI04_g30799_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 1.1e-08 63.5 82 43.9
Duzib160G0024 Durio zibethinus HOM05D006350 ORTHO05D007850 1.5e-08 63.2 107 40.2
Aqoxy4G01993 Aquilegia oxysepala HOM05D006350 ORTHO05D007850 1.9e-08 62.8 106 44.3
Gohir.D10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 1.9e-08 62.8 109 38.5
Gorai.011G016800 Gossypium raimondii HOM05D006350 ORTHO05D007850 1.9e-08 62.8 109 38.5
Lalb_Chr09g0319631 Lupinus albus HOM05D006350 ORTHO05D007850 1.9e-08 62.8 108 38.9
Manes.17G035000 Manihot esculenta HOM05D006350 ORTHO05D007850 1.9e-08 62.8 105 42.9
CiPaw.09G087000 Carya illinoinensis HOM05D006350 ORTHO05D007850 2.5e-08 62.4 108 38.0
Potri.004G022500 Populus trichocarpa HOM05D006350 ORTHO05D007850 3.3e-08 62.0 106 42.5
Gohir.A10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 4.3e-08 61.6 109 38.5
Sabra04G0012300 Salix brachista HOM05D006350 ORTHO05D007850 4.3e-08 61.6 105 41.0
Sc05g0008900 Simmondsia chinensis HOM05D006350 ORTHO05D007850 4.3e-08 61.6 104 38.5
Lj1A1225T76 Lonicera japonica HOM05D006350 ORTHO05D007850 7.3e-08 60.8 115 35.7
ECA248G2377 Erigeron canadensis HOM05D006350 ORTHO05D007850 1.2e-07 60.1 105 40.0
ATR0109G008 Amborella trichopoda HOM05D006350 ORTHO05D007850 1.6e-07 59.7 34 85.3
Pp3c10_12100 Physcomitrium patens HOM05D006350 ORTHO05D007850 1.6e-07 59.7 30 90.0
Atru.chr10.2148 Acer truncatum HOM05D006350 ORTHO05D007850 2.8e-07 58.9 30 90.0
Haze_08403 Corylus avellana HOM05D006350 ORTHO05D007850 2.8e-07 58.9 30 90.0
Hund23514 Selenicereus undatus HOM05D006350 ORTHO05D007850 2.8e-07 58.9 95 42.1
CDE05G1739 Ceratophyllum demersum HOM05D006350 ORTHO05D007850 4.7e-07 58.2 35 77.1
MBI02_g10104_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 6.2e-07 57.8 30 86.7
Psat3g152760 Pisum sativum HOM05D006350 ORTHO05D007850 6.2e-07 57.8 30 86.7
TPR.G10193 Trifolium pratense HOM05D006350 ORTHO05D007850 1.1e-06 57.0 30 86.7
PGR004G2689 Punica granatum HOM05D006350 ORTHO05D007850 1.8e-06 56.2 106 37.7
MELO3C007370.2 Cucumis melo HOM05D006350 ORTHO05D007850 8.9e-06 53.9 30 80.0


User provided reference genes

Program Settings