Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.3e-174 616.3 320 100.0
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.0e-74 283.5 334 50.9
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.1e-24 118.2 247 32.4
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 5.6e-24 115.9 257 31.1
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 5.6e-24 115.9 257 31.1
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 5.6e-24 115.9 269 31.2
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 7.3e-24 115.5 224 34.4
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 8.1e-23 112.1 227 33.0
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.1e-22 111.7 235 32.8
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.4e-22 111.3 238 33.2
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.4e-22 111.3 260 30.8
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.8e-22 110.9 243 29.6
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.8e-22 110.9 258 31.8
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 2.4e-22 110.5 230 30.9
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 3.1e-22 110.2 259 32.0
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 5.2e-22 109.4 235 32.3
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 5.2e-22 109.4 254 32.7
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 6.8e-22 109.0 343 28.6
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 1.2e-21 108.2 259 31.3
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.5e-21 107.8 225 32.0
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.5e-21 107.8 235 31.9
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 2.0e-21 107.5 257 31.1
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 2.0e-21 107.5 235 31.1
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 2.6e-21 107.1 252 30.2
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 2.6e-21 107.1 262 30.2
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 2.6e-21 107.1 240 32.1
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 5.8e-21 105.9 218 32.6
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 5.8e-21 105.9 238 30.3
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 7.6e-21 105.5 205 34.1
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 7.6e-21 105.5 236 31.4
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 1.3e-20 104.8 251 31.5
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.3e-20 104.8 235 29.8
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 1.7e-20 104.4 254 31.9
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.7e-20 104.4 254 29.9
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 1.7e-20 104.4 236 31.4
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.7e-20 104.4 240 31.7
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.9e-20 103.6 257 30.0
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 2.9e-20 103.6 246 29.3
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 2.9e-20 103.6 262 29.8
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 3.8e-20 103.2 255 30.2
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 3.8e-20 103.2 240 29.6
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 6.4e-20 102.4 212 33.5
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 6.4e-20 102.4 249 27.7
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 8.4e-20 102.1 215 31.6
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 8.4e-20 102.1 205 30.7
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.1e-19 101.7 235 31.5
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.9e-19 100.9 236 32.2
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 2.4e-19 100.5 207 30.9
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 2.4e-19 100.5 247 31.2
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 2.4e-19 100.5 246 30.1
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.4e-19 100.5 236 30.9
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 3.2e-19 100.1 236 32.2
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 3.2e-19 100.1 216 31.9
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 4.1e-19 99.8 205 30.7
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 5.4e-19 99.4 232 31.9
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 5.4e-19 99.4 253 30.8
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 7.1e-19 99.0 234 29.9
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 9.2e-19 98.6 247 30.8
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.6e-18 97.8 254 30.3
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.6e-18 97.8 264 28.8
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.1e-18 97.4 251 31.9
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-18 97.4 231 30.3
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-18 97.4 231 30.3
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.7e-18 97.1 230 29.1
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 2.7e-18 97.1 235 31.1
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 2.7e-18 97.1 235 29.8
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 2.7e-18 97.1 235 29.4
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 2.7e-18 97.1 247 29.6
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 2.7e-18 97.1 250 29.2
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 4.6e-18 96.3 235 29.8
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 6.0e-18 95.9 235 29.4
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 6.0e-18 95.9 253 28.1
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.0e-17 95.1 231 30.7
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.7e-17 94.4 245 28.6
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.7e-17 94.4 232 31.5
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.7e-17 94.4 264 28.8
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 2.3e-17 94.0 242 31.8
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 3.0e-17 93.6 256 28.9
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 5.1e-17 92.8 246 28.0
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 6.6e-17 92.4 244 27.5
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 8.7e-17 92.0 243 28.8
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 8.7e-17 92.0 229 30.6
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.1e-16 91.7 214 31.3
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.1e-16 91.7 214 31.3
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.5e-16 91.3 311 31.2
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.5e-16 91.3 259 28.6
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.9e-16 90.9 201 29.9
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 7.3e-16 89.0 248 28.2
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.2e-15 88.2 232 28.9
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.6e-15 87.8 249 26.9
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.6e-15 86.7 257 29.2
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 6.2e-15 85.9 229 29.3
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 5.2e-14 82.8 285 27.0
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 1.7e-12 77.8 255 28.6
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 6.4e-12 75.9 233 28.8
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.6e-10 71.2 212 27.4
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.1e-10 70.9 265 26.8
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 4.6e-10 69.7 250 24.8
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.1e-06 58.5 88 39.8
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.8e-06 57.8 94 42.6


User provided reference genes

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