Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_2850 Physcomitrium patens HOM05D003688 ORTHO05D004338 0.0e+00 3514.9 1734 100.0
Pp3c9_4700 Physcomitrium patens HOM05D003688 ORTHO05D004338 0.0e+00 2107.4 1741 62.7
Pp3c15_3560 Physcomitrium patens HOM05D003688 ORTHO05D004338 0.0e+00 2006.9 1747 60.2
Mapoly0028s0055 Marchantia polymorpha HOM05D003688 ORTHO05D004338 0.0e+00 1125.2 1835 39.7
Pp3c7_22570 Physcomitrium patens HOM05D003688 ORTHO05D004338 5.9e-311 1071.6 1699 40.0
Pp3c2_29090 Physcomitrium patens HOM05D003688 ORTHO05D004338 2.4e-310 1069.7 1806 37.8
AagrBONN_evm.TU.Sc2ySwM_344.5255 Anthoceros agrestis HOM05D003688 ORTHO05D004338 1.6e-295 1020.4 1811 36.9
SMO361G0120 Selaginella moellendorffii HOM05D003688 ORTHO05D004338 3.8e-66 258.5 2108 22.3
Aqoxy2G02133 Aquilegia oxysepala HOM05D003688 ORTHO05D004338 2.5e-65 255.8 2089 21.9
Thhalv10012411m.g Eutrema salsugineum HOM05D003688 ORTHO05D004338 2.1e-64 252.7 2106 22.0
ATR0559G162 Amborella trichopoda HOM05D003688 ORTHO05D004338 1.8e-63 249.6 2045 21.4
SMO361G0552 Selaginella moellendorffii HOM05D003688 ORTHO05D004338 2.3e-63 249.2 2051 22.5
Glyma.07G132300 Glycine max HOM05D003688 ORTHO05D004338 6.7e-63 247.7 2105 20.5
Aa31LG1G22450 Aethionema arabicum HOM05D003688 ORTHO05D004338 8.2e-61 240.7 2061 21.5
ECA236G0128 Erigeron canadensis HOM05D003688 ORTHO05D004338 1.4e-60 240.0 1988 22.4
Lsat_1_v5_gn_8_81981 Lactuca sativa HOM05D003688 ORTHO05D004338 1.4e-60 240.0 1981 21.3
Ca_07551_v3 Cicer arietinum L. HOM05D003688 ORTHO05D004338 2.4e-60 239.2 2080 20.5
Glyma.18G181200 Glycine max HOM05D003688 ORTHO05D004338 4.1e-60 238.4 2076 20.6
PSO151G0112 Papaver somniferum HOM05D003688 ORTHO05D004338 4.1e-60 238.4 2100 21.3
BcaC06g31982 Brassica carinata HOM05D003688 ORTHO05D004338 5.3e-60 238.0 2057 21.4
SalBow4G0433 Salvia bowleyana HOM05D003688 ORTHO05D004338 9.0e-60 237.3 2094 21.3
Phvul.008G106950 Phaseolus vulgaris HOM05D003688 ORTHO05D004338 1.2e-59 236.9 2072 21.4
Dinv35601 Davidia involucrata HOM05D003688 ORTHO05D004338 2.0e-59 236.1 2063 21.3
TWI74G1144 Tripterygium wilfordii HOM05D003688 ORTHO05D004338 2.2e-58 232.6 2107 21.3
PGR004G0645 Punica granatum HOM05D003688 ORTHO05D004338 2.9e-58 232.3 2130 20.3
QL07p048346 Quercus lobata HOM05D003688 ORTHO05D004338 2.9e-58 232.3 2064 21.3
AUR62029194 Chenopodium quinoa HOM05D003688 ORTHO05D004338 3.2e-57 228.8 2074 21.1
HanXRQChr06g0179281 Helianthus annuus HOM05D003688 ORTHO05D004338 3.2e-57 228.8 1896 21.9
Carub.0006s0114 Capsella rubella HOM05D003688 ORTHO05D004338 4.2e-57 228.4 2090 21.2
HanXRQChr06g0177081 Helianthus annuus HOM05D003688 ORTHO05D004338 4.2e-57 228.4 1941 21.7
PSO339G2612 Papaver somniferum HOM05D003688 ORTHO05D004338 5.5e-57 228.0 2136 21.3
arahy.Tifrunner.gnm1.ann1.VY3GX3 Arachis hypogaea HOM05D003688 ORTHO05D004338 7.1e-57 227.6 2095 20.0
Migut.L01946 Erythranthe guttata HOM05D003688 ORTHO05D004338 7.1e-57 227.6 2120 20.3
MSTRG.10258 Avicennia marina HOM05D003688 ORTHO05D004338 1.6e-56 226.5 2117 20.5
Sp6g40140 Schrenkiella parvula HOM05D003688 ORTHO05D004338 2.1e-56 226.1 2100 20.9
DCAR_009228 Daucus carota HOM05D003688 ORTHO05D004338 2.7e-56 225.7 2091 21.0
Hma1.2p1_1899F.1_g306950 Hydrangea macrophylla HOM05D003688 ORTHO05D004338 2.7e-56 225.7 2073 21.0
arahy.Tifrunner.gnm1.ann1.N5BDHI Arachis hypogaea HOM05D003688 ORTHO05D004338 4.6e-56 224.9 2094 20.4
Medtr7g061540 Medicago truncatula HOM05D003688 ORTHO05D004338 6.1e-56 224.6 2038 20.8
TPR.G23256 Trifolium pratense HOM05D003688 ORTHO05D004338 6.1e-56 224.6 2027 21.8
HanXRQChr04g0125101 Helianthus annuus HOM05D003688 ORTHO05D004338 1.0e-55 223.8 1968 21.4
BolC3t12653H Brassica oleracea HOM05D003688 ORTHO05D004338 1.3e-55 223.4 1961 22.1
Actinidia11259 Actinidia chinensis HOM05D003688 ORTHO05D004338 1.8e-55 223.0 2074 21.8
Cfa017377 Carpinus fangiana HOM05D003688 ORTHO05D004338 2.3e-55 222.6 2153 20.4
SEGI_36024 Sequoiadendron giganteum HOM05D003688 ORTHO05D004338 3.9e-55 221.9 2206 21.3
Solyc09g010830.4 Solanum lycopersicum HOM05D003688 ORTHO05D004338 6.7e-55 221.1 2107 21.0
EL10Ac9g22598 Beta vulgaris HOM05D003688 ORTHO05D004338 8.7e-55 220.7 2086 20.8
A10p33320 Brassica napus HOM05D003688 ORTHO05D004338 1.5e-54 219.9 2073 21.4
ClCG10G021160 Citrullus lanatus HOM05D003688 ORTHO05D004338 1.5e-54 219.9 2049 21.4
C03p00900 Brassica napus HOM05D003688 ORTHO05D004338 2.5e-54 219.2 1976 21.7
MD12G1142100 Malus domestica HOM05D003688 ORTHO05D004338 4.3e-54 218.4 2128 20.5
C02p00430 Brassica napus HOM05D003688 ORTHO05D004338 7.4e-54 217.6 2100 21.2
BolC2t06043H Brassica oleracea HOM05D003688 ORTHO05D004338 7.4e-54 217.6 2098 21.2
Psat3g140000 Pisum sativum HOM05D003688 ORTHO05D004338 7.4e-54 217.6 2070 19.8
BcaB01g06158 Brassica carinata HOM05D003688 ORTHO05D004338 9.7e-54 217.2 1953 21.6
Thecc.05G039500 Theobroma cacao HOM05D003688 ORTHO05D004338 9.7e-54 217.2 2095 20.7
BraA02t04715Z Brassica rapa HOM05D003688 ORTHO05D004338 1.3e-53 216.9 2105 21.2
Sopen09g005560 Solanum pennellii HOM05D003688 ORTHO05D004338 1.3e-53 216.9 2085 21.8
Sabra06G0065100 Salix brachista HOM05D003688 ORTHO05D004338 1.6e-53 216.5 2060 21.1
TWI77G0691 Tripterygium wilfordii HOM05D003688 ORTHO05D004338 1.6e-53 216.5 2094 20.9
Lalb_Chr03g0042261 Lupinus albus HOM05D003688 ORTHO05D004338 2.2e-53 216.1 2091 20.5
MELO3C009256.2 Cucumis melo HOM05D003688 ORTHO05D004338 2.8e-53 215.7 2056 20.9
Eucgr.A01266 Eucalyptus grandis HOM05D003688 ORTHO05D004338 2.8e-53 215.7 2116 20.2
CsaV3_3G034880 Cucumis sativus L. HOM05D003688 ORTHO05D004338 3.7e-53 215.3 2070 20.8
AT5G02310 Arabidopsis thaliana HOM05D003688 ORTHO05D004338 4.8e-53 214.9 2090 20.7
Nn2g11106 Nelumbo nucifera HOM05D003688 ORTHO05D004338 8.2e-53 214.2 2047 21.3
CANSAT35G0056 Cannabis sativa HOM05D003688 ORTHO05D004338 1.1e-52 213.8 2121 20.7
BcaNung02121 Brassica carinata HOM05D003688 ORTHO05D004338 1.4e-52 213.4 2073 21.2
BraA10t45363Z Brassica rapa HOM05D003688 ORTHO05D004338 1.4e-52 213.4 2074 21.3
AUR62014948 Chenopodium quinoa HOM05D003688 ORTHO05D004338 3.1e-52 212.2 2055 21.9
Duzib106G0690 Durio zibethinus HOM05D003688 ORTHO05D004338 3.1e-52 212.2 2089 21.2
Cc06_g02620 Coffea canephora HOM05D003688 ORTHO05D004338 5.3e-52 211.5 2125 20.5
CAN.G324.6 Capsicum annuum HOM05D003688 ORTHO05D004338 1.2e-51 210.3 2052 21.5
Gohir.D13G098600 Gossypium hirsutum HOM05D003688 ORTHO05D004338 1.2e-51 210.3 2097 20.4
CSS0020509 Camellia sinensis var. sinensis HOM05D003688 ORTHO05D004338 1.5e-51 209.9 2135 20.3
C09p74230 Brassica napus HOM05D003688 ORTHO05D004338 2.0e-51 209.5 2076 21.0
Duzib128G0151 Durio zibethinus HOM05D003688 ORTHO05D004338 7.7e-51 207.6 2138 20.7
A03p00630 Brassica napus HOM05D003688 ORTHO05D004338 1.0e-50 207.2 1986 21.6
AL6G11560 Arabidopsis lyrata HOM05D003688 ORTHO05D004338 2.2e-50 206.1 2033 20.5
Gorai.001G249500 Gossypium raimondii HOM05D003688 ORTHO05D004338 2.9e-50 205.7 2119 20.1
Lj1g0008992 Lotus japonicus HOM05D003688 ORTHO05D004338 2.9e-50 205.7 2102 19.8
BraA03t09453Z Brassica rapa HOM05D003688 ORTHO05D004338 3.8e-50 205.3 1986 21.6
TAR369G0630 Trochodendron aralioides HOM05D003688 ORTHO05D004338 2.5e-49 202.6 2091 20.3
Gohir.A13G093100 Gossypium hirsutum HOM05D003688 ORTHO05D004338 5.5e-49 201.4 2091 20.4
Prupe.6G255500 Prunus persica HOM05D003688 ORTHO05D004338 9.4e-49 200.7 2133 20.8
FvH4_6g13660 Fragaria vesca HOM05D003688 ORTHO05D004338 1.6e-48 199.9 2153 20.1
Manes.09G091838 Manihot esculenta HOM05D003688 ORTHO05D004338 2.1e-48 199.5 2087 20.3
TAR623G0018 Trochodendron aralioides HOM05D003688 ORTHO05D004338 2.7e-48 199.1 2074 20.7
Lalb_Chr01g0022521 Lupinus albus HOM05D003688 ORTHO05D004338 3.6e-48 198.7 2047 20.5
FAN14G0142 Fragaria x ananassa HOM05D003688 ORTHO05D004338 6.1e-48 198.0 2151 20.0
SGA_v2.0_scaffold35G14236 Striga asiatica HOM05D003688 ORTHO05D004338 7.9e-48 197.6 2178 21.0
Haze_20793 Corylus avellana HOM05D003688 ORTHO05D004338 1.0e-47 197.2 2161 20.3
FAN09G1807 Fragaria x ananassa HOM05D003688 ORTHO05D004338 2.3e-47 196.1 2144 19.9
Gorai.006G172700 Gossypium raimondii HOM05D003688 ORTHO05D004338 6.7e-47 194.5 2054 20.0
Gohir.A09G155900 Gossypium hirsutum HOM05D003688 ORTHO05D004338 1.5e-46 193.4 2098 19.7
THA.LOC104816269 Tarenaya hassleriana HOM05D003688 ORTHO05D004338 1.5e-46 193.4 2018 21.0
MD04G1129300 Malus domestica HOM05D003688 ORTHO05D004338 2.0e-46 193.0 2042 20.9
Sed0016820 Sechium edule HOM05D003688 ORTHO05D004338 2.5e-46 192.6 2046 21.2
CiPaw.10G145700 Carya illinoinensis HOM05D003688 ORTHO05D004338 3.3e-46 192.2 2143 20.2
Gohir.D09G151400 Gossypium hirsutum HOM05D003688 ORTHO05D004338 4.3e-46 191.8 2036 20.3
Lj3C967G6 Lonicera japonica HOM05D003688 ORTHO05D004338 4.3e-46 191.8 2049 20.8
MBI14_g20100_MAGBIO Magnolia biondii HOM05D003688 ORTHO05D004338 9.7e-46 190.7 1014 22.6
vmacro20159 Vaccinium macrocarpon HOM05D003688 ORTHO05D004338 1.7e-45 189.9 2123 21.2
Rhsim05G0193000 Rhododendron simsii HOM05D003688 ORTHO05D004338 2.8e-45 189.1 876 23.4
Sopen10g034210 Solanum pennellii HOM05D003688 ORTHO05D004338 4.8e-45 188.3 2062 21.1
Gohir.D01G211800 Gossypium hirsutum HOM05D003688 ORTHO05D004338 6.3e-45 188.0 2073 20.3
Solyc10g084760.3 Solanum lycopersicum HOM05D003688 ORTHO05D004338 2.4e-44 186.0 880 23.5
Potri.006G085700 Populus trichocarpa HOM05D003688 ORTHO05D004338 4.1e-44 185.3 866 22.5
Sed0022373 Sechium edule HOM05D003688 ORTHO05D004338 5.3e-44 184.9 877 22.1
Peaxi162Scf00165g01216 Petunia axillaris HOM05D003688 ORTHO05D004338 6.9e-44 184.5 2041 20.6
CARHR211070 Cardamine hirsuta HOM05D003688 ORTHO05D004338 1.0e-42 180.6 2044 20.6
Pp3c10_20380 Physcomitrium patens HOM05D003688 ORTHO05D004338 2.2e-42 179.5 2195 20.7
Pp3c3_37220 Physcomitrium patens HOM05D003688 ORTHO05D004338 2.9e-42 179.1 2185 20.1
HPP92_012595 Vanilla planifolia HOM05D003688 ORTHO05D004338 5.0e-42 178.3 2114 19.9
Gohir.A01G222300 Gossypium hirsutum HOM05D003688 ORTHO05D004338 6.5e-42 177.9 2031 20.4
Atru.chr8.1978 Acer truncatum HOM05D003688 ORTHO05D004338 8.5e-42 177.6 1144 21.5
FAN05G2232 Fragaria x ananassa HOM05D003688 ORTHO05D004338 1.4e-39 170.2 1121 21.9
Gorai.002G257600 Gossypium raimondii HOM05D003688 ORTHO05D004338 1.8e-39 169.9 2044 20.3
RcHm_v2.0_Chr3g0466531 Rosa chinensis HOM05D003688 ORTHO05D004338 3.9e-39 168.7 894 21.7
Pp3c8_2930 Physcomitrium patens HOM05D003688 ORTHO05D004338 8.8e-39 167.5 870 21.8
Pp3c8_2940 Physcomitrium patens HOM05D003688 ORTHO05D004338 8.8e-39 167.5 870 21.8
Ciclev10013610m.g Citrus clementina HOM05D003688 ORTHO05D004338 3.3e-38 165.6 853 23.2
Pp3c3_24510 Physcomitrium patens HOM05D003688 ORTHO05D004338 6.3e-37 161.4 2188 20.2
Mapoly0123s0014 Marchantia polymorpha HOM05D003688 ORTHO05D004338 4.1e-36 158.7 1098 22.3
FAN02G2694 Fragaria x ananassa HOM05D003688 ORTHO05D004338 1.3e-34 153.7 1142 21.0
Nitab4.5_0003845g0020 Nicotiana tabacum HOM05D003688 ORTHO05D004338 5.0e-34 151.8 357 29.7
VMungo1383G2756 Vigna mungo HOM05D003688 ORTHO05D004338 2.5e-33 149.4 714 21.8
Cpa.g.sc228.13 Carica papaya HOM05D003688 ORTHO05D004338 7.2e-33 147.9 379 27.7
Sc20g0004890 Simmondsia chinensis HOM05D003688 ORTHO05D004338 9.4e-33 147.5 892 21.9
SGA_v2.0_scaffold94G28599 Striga asiatica HOM05D003688 ORTHO05D004338 2.7e-32 146.0 1192 20.6
Nitab4.5_0006677g0030 Nicotiana tabacum HOM05D003688 ORTHO05D004338 1.4e-31 143.7 352 28.1
Os01g0148000 Oryza sativa ssp. japonica HOM05D003688 ORTHO05D004338 1.5e-30 140.2 376 27.4
AUR62029189 Chenopodium quinoa HOM05D003688 ORTHO05D004338 3.3e-30 139.0 2040 19.9
Peaxi162Scf00094g00138 Petunia axillaris HOM05D003688 ORTHO05D004338 5.7e-30 138.3 418 27.8
MCO04G508 Micromonas commoda HOM05D003688 ORTHO05D004338 3.1e-28 132.5 157 42.7
unitig_0.g702 Utricularia gibba HOM05D003688 ORTHO05D004338 7.0e-28 131.3 575 23.1
GSVIVG01034167001 Vitis vinifera HOM05D003688 ORTHO05D004338 9.1e-28 131.0 306 30.1
Zm00001eb124390 Zea mays HOM05D003688 ORTHO05D004338 9.1e-28 131.0 1468 21.4
AUR62014950 Chenopodium quinoa HOM05D003688 ORTHO05D004338 3.5e-27 129.0 711 24.1
Oeu033326.1 Olea europaea HOM05D003688 ORTHO05D004338 2.2e-26 126.3 303 27.7
CDE04G3033 Ceratophyllum demersum HOM05D003688 ORTHO05D004338 3.8e-26 125.6 1357 20.7
Oeu036137.1 Olea europaea HOM05D003688 ORTHO05D004338 1.5e-25 123.6 294 29.9
Nitab4.5_0000216g0310 Nicotiana tabacum HOM05D003688 ORTHO05D004338 2.5e-25 122.9 1410 21.3
BcaB01g06223 Brassica carinata HOM05D003688 ORTHO05D004338 9.4e-25 120.9 275 30.9
Nitab4.5_0000202g0100 Nicotiana tabacum HOM05D003688 ORTHO05D004338 4.0e-23 115.5 281 29.5
CDE04G0526 Ceratophyllum demersum HOM05D003688 ORTHO05D004338 5.2e-23 115.2 244 32.4
Cre02.g089237 Chlamydomonas reinhardtii HOM05D003688 ORTHO05D004338 2.6e-22 112.8 157 36.3
PRCOL_00001936 Prasinoderma coloniale HOM05D003688 ORTHO05D004338 4.8e-21 108.6 731 23.8
CBR_g34200 Chara braunii HOM05D003688 ORTHO05D004338 3.1e-20 105.9 147 38.8
GSVIVG01034169001 Vitis vinifera HOM05D003688 ORTHO05D004338 7.7e-19 101.3 1390 19.1
Os01g0148050 Oryza sativa ssp. japonica HOM05D003688 ORTHO05D004338 6.5e-18 98.2 723 23.8
Atru.chr8.1976 Acer truncatum HOM05D003688 ORTHO05D004338 2.7e-16 92.8 263 27.0
BcaC03g18436 Brassica carinata HOM05D003688 ORTHO05D004338 1.0e-15 90.9 259 28.2
BcaNung06990 Brassica carinata HOM05D003688 ORTHO05D004338 1.0e-15 90.9 259 28.2
Nitab4.5_0003845g0030 Nicotiana tabacum HOM05D003688 ORTHO05D004338 1.8e-15 90.1 156 36.5
Peaxi162Scf00094g01313 Petunia axillaris HOM05D003688 ORTHO05D004338 1.8e-15 90.1 263 27.0
MBI14_g36919_MAGBIO Magnolia biondii HOM05D003688 ORTHO05D004338 4.0e-15 89.0 118 42.4
AUR62029193 Chenopodium quinoa HOM05D003688 ORTHO05D004338 5.7e-14 85.1 95 37.9
Haze_03516 Corylus avellana HOM05D003688 ORTHO05D004338 5.7e-14 85.1 253 26.1
Cfa025161 Carpinus fangiana HOM05D003688 ORTHO05D004338 1.4e-12 80.5 1333 19.4
Oeu051935.1 Olea europaea HOM05D003688 ORTHO05D004338 7.0e-12 78.2 108 42.6
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 4.5e-11 75.5 85 43.5
Psat2g029320 Pisum sativum HOM05D003688 ORTHO05D017064 7.7e-11 74.7 113 39.8
Oeu036138.2 Olea europaea HOM05D003688 ORTHO05D004338 1.3e-10 73.9 220 27.7
Nitab4.5_0006677g0040 Nicotiana tabacum HOM05D003688 ORTHO05D004338 2.1e-08 66.6 117 32.5
CAN.G326.3 Capsicum annuum HOM05D003688 ORTHO05D004338 2.8e-08 66.2 98 41.8
GSVIVG01023054001 Vitis vinifera HOM05D003688 ORTHO05D004338 4.7e-08 65.5 71 43.7
Oeu051936.1 Olea europaea HOM05D003688 ORTHO05D004338 8.9e-07 61.2 169 26.0
Pp3c22_8160 Physcomitrium patens HOM05D003688 ORTHO05D004338 9.8e-06 57.8 212 25.9


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