Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_8210 Physcomitrium patens HOM05D004712 ORTHO05D005306 1.6e-224 782.3 371 100.0
Pp3c9_13080 Physcomitrium patens HOM05D004712 ORTHO05D005306 1.5e-137 493.4 289 79.9
Mapoly0072s0029 Marchantia polymorpha HOM05D004712 ORTHO05D005306 1.1e-135 487.3 327 70.0
AagrBONN_evm.TU.Sc2ySwM_228.3302 Anthoceros agrestis HOM05D004712 ORTHO05D005306 1.4e-132 476.9 344 67.7
SEGI_23712 Sequoiadendron giganteum HOM05D004712 ORTHO05D005306 1.8e-122 443.4 315 67.3
HanXRQChr17g0538901 Helianthus annuus HOM05D004712 ORTHO05D005306 1.2e-115 420.6 325 62.5
PSO210G0832 Papaver somniferum HOM05D004712 ORTHO05D005306 1.2e-115 420.6 327 61.5
PSO210G7282 Papaver somniferum HOM05D004712 ORTHO05D005306 1.2e-115 420.6 327 61.5
Ciclev10008867m.g Citrus clementina HOM05D004712 ORTHO05D005306 6.1e-115 418.3 315 62.2
ClCG08G016850 Citrullus lanatus HOM05D004712 ORTHO05D005306 8.0e-115 417.9 335 60.6
Dinv23416 Davidia involucrata HOM05D004712 ORTHO05D005306 8.0e-115 417.9 315 63.2
ECA246G0363 Erigeron canadensis HOM05D004712 ORTHO05D005306 2.3e-114 416.4 319 63.0
Lsat_1_v5_gn_3_27140 Lactuca sativa HOM05D004712 ORTHO05D005306 2.3e-114 416.4 323 62.8
CsaV3_2G025770 Cucumis sativus L. HOM05D004712 ORTHO05D005306 5.2e-114 415.2 335 60.3
Nn6g35377 Nelumbo nucifera HOM05D004712 ORTHO05D005306 6.8e-114 414.8 335 60.3
Prupe.1G416100 Prunus persica HOM05D004712 ORTHO05D005306 6.8e-114 414.8 315 62.9
Atru.chr7.2032 Acer truncatum HOM05D004712 ORTHO05D005306 8.8e-114 414.5 320 60.3
RcHm_v2.0_Chr6g0310381 Rosa chinensis HOM05D004712 ORTHO05D005306 1.2e-113 414.1 312 63.8
Aqoxy7G03946 Aquilegia oxysepala HOM05D004712 ORTHO05D005306 1.5e-113 413.7 341 59.8
COL.COLO4_21017 Corchorus olitorius HOM05D004712 ORTHO05D005306 1.5e-113 413.7 308 62.7
Actinidia21731 Actinidia chinensis HOM05D004712 ORTHO05D005306 2.0e-113 413.3 317 61.5
BcaB06g29616 Brassica carinata HOM05D004712 ORTHO05D005306 2.6e-113 412.9 309 63.8
A04p20130 Brassica napus HOM05D004712 ORTHO05D005306 2.6e-113 412.9 309 63.8
BraA04t17594Z Brassica rapa HOM05D004712 ORTHO05D005306 2.6e-113 412.9 309 63.8
SMO174G0103 Selaginella moellendorffii HOM05D004712 ORTHO05D005306 2.6e-113 412.9 311 67.5
TWI63G0904 Tripterygium wilfordii HOM05D004712 ORTHO05D005306 2.6e-113 412.9 315 61.6
C04p55830 Brassica napus HOM05D004712 ORTHO05D005306 3.4e-113 412.5 309 63.8
MD08G1074400 Malus domestica HOM05D004712 ORTHO05D005306 3.4e-113 412.5 306 64.1
GSVIVG01016906001 Vitis vinifera HOM05D004712 ORTHO05D005306 3.4e-113 412.5 308 63.6
Glyma.17G231700 Glycine max HOM05D004712 ORTHO05D005306 4.4e-113 412.1 323 62.5
BcaC02g08320 Brassica carinata HOM05D004712 ORTHO05D005306 5.7e-113 411.8 309 63.4
BolC4t27113H Brassica oleracea HOM05D004712 ORTHO05D005306 5.7e-113 411.8 309 63.4
Gohir.A05G044400 Gossypium hirsutum HOM05D004712 ORTHO05D005306 5.7e-113 411.8 309 62.1
Nn6g35381 Nelumbo nucifera HOM05D004712 ORTHO05D005306 5.7e-113 411.8 322 60.9
Manes.03G046000 Manihot esculenta HOM05D004712 ORTHO05D005306 7.5e-113 411.4 324 61.1
Thecc.09G050100 Theobroma cacao HOM05D004712 ORTHO05D005306 9.8e-113 411.0 305 61.3
ATR0789G022 Amborella trichopoda HOM05D004712 ORTHO05D005306 1.3e-112 410.6 316 61.7
Ca_13194_v3 Cicer arietinum L. HOM05D004712 ORTHO05D005306 1.3e-112 410.6 307 62.2
GSVIVG01035336001 Vitis vinifera HOM05D004712 ORTHO05D005306 1.3e-112 410.6 315 62.2
CANSAT25G2372 Cannabis sativa HOM05D004712 ORTHO05D005306 2.8e-112 409.5 314 61.1
Gohir.D05G046000 Gossypium hirsutum HOM05D004712 ORTHO05D005306 2.8e-112 409.5 308 61.7
Solyc08g065880.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 2.8e-112 409.5 315 62.9
Phvul.001G032800 Phaseolus vulgaris HOM05D004712 ORTHO05D005306 3.7e-112 409.1 333 59.2
Sopen08g019580 Solanum pennellii HOM05D004712 ORTHO05D005306 3.7e-112 409.1 315 62.9
QL02p001773 Quercus lobata HOM05D004712 ORTHO05D005306 4.8e-112 408.7 314 62.4
TAR624G0834 Trochodendron aralioides HOM05D004712 ORTHO05D005306 4.8e-112 408.7 315 61.9
Cc08_g10100 Coffea canephora HOM05D004712 ORTHO05D005306 8.3e-112 407.9 307 62.2
PGR031G0938 Punica granatum HOM05D004712 ORTHO05D005306 8.3e-112 407.9 311 62.7
Hund03367 Selenicereus undatus HOM05D004712 ORTHO05D005306 8.3e-112 407.9 306 63.4
Aa31LG5G9770 Aethionema arabicum HOM05D004712 ORTHO05D005306 1.8e-111 406.8 320 62.2
CSS0005003 Camellia sinensis var. sinensis HOM05D004712 ORTHO05D005306 1.8e-111 406.8 317 61.2
AUR62009206 Chenopodium quinoa HOM05D004712 ORTHO05D005306 1.8e-111 406.8 308 62.3
Sc09g0009600 Simmondsia chinensis HOM05D004712 ORTHO05D005306 1.8e-111 406.8 307 62.9
EL10Ac2g03950 Beta vulgaris HOM05D004712 ORTHO05D005306 2.4e-111 406.4 307 63.2
VMungo0647G0552 Vigna mungo HOM05D004712 ORTHO05D005306 4.1e-111 405.6 309 62.8
Thhalv10002033m.g Eutrema salsugineum HOM05D004712 ORTHO05D005306 5.4e-111 405.2 307 63.8
FvH4_2g32310 Fragaria vesca HOM05D004712 ORTHO05D005306 7.0e-111 404.8 312 62.5
CSS0042817 Camellia sinensis var. sinensis HOM05D004712 ORTHO05D005306 9.1e-111 404.4 316 61.4
FAN20G0488 Fragaria x ananassa HOM05D004712 ORTHO05D005306 9.1e-111 404.4 312 62.2
Lalb_Chr22g0355941 Lupinus albus HOM05D004712 ORTHO05D005306 9.1e-111 404.4 315 61.3
Psat6g019200 Pisum sativum HOM05D004712 ORTHO05D005306 9.1e-111 404.4 321 59.2
Migut.A00161 Erythranthe guttata HOM05D004712 ORTHO05D005306 1.6e-110 403.7 313 60.4
Glyma.14G091700 Glycine max HOM05D004712 ORTHO05D005306 1.6e-110 403.7 309 62.8
Hma1.2p1_1266F.1_g271360 Hydrangea macrophylla HOM05D004712 ORTHO05D005306 1.6e-110 403.7 307 62.2
Potri.006G234000 Populus trichocarpa HOM05D004712 ORTHO05D005306 1.6e-110 403.7 313 61.0
Lj5g0015176 Lotus japonicus HOM05D004712 ORTHO05D005306 2.0e-110 403.3 309 62.5
FAN27G0349 Fragaria x ananassa HOM05D004712 ORTHO05D005306 2.7e-110 402.9 307 62.5
Sp4g05810 Schrenkiella parvula HOM05D004712 ORTHO05D005306 2.7e-110 402.9 309 62.1
Peaxi162Scf00840g00117 Petunia axillaris HOM05D004712 ORTHO05D005306 3.5e-110 402.5 313 62.0
SalBow4G3242 Salvia bowleyana HOM05D004712 ORTHO05D005306 3.5e-110 402.5 315 60.3
FAN24G2925 Fragaria x ananassa HOM05D004712 ORTHO05D005306 4.5e-110 402.1 312 62.5
Potri.018G058900 Populus trichocarpa HOM05D004712 ORTHO05D005306 4.5e-110 402.1 313 60.1
QL05p017273 Quercus lobata HOM05D004712 ORTHO05D005306 4.5e-110 402.1 311 60.8
CiPaw.15G042700 Carya illinoinensis HOM05D004712 ORTHO05D005306 5.9e-110 401.7 315 61.0
THA.LOC104803739 Tarenaya hassleriana HOM05D004712 ORTHO05D005306 5.9e-110 401.7 308 61.7
TPR.G13042 Trifolium pratense HOM05D004712 ORTHO05D005306 5.9e-110 401.7 324 59.3
AT2G25910 Arabidopsis thaliana HOM05D004712 ORTHO05D005306 1.3e-109 400.6 309 61.8
FAN15G0413 Fragaria x ananassa HOM05D004712 ORTHO05D005306 1.3e-109 400.6 312 62.5
Os01g0566900 Oryza sativa ssp. japonica HOM05D004712 ORTHO05D005306 1.3e-109 400.6 315 61.3
Duzib168G2010 Durio zibethinus HOM05D004712 ORTHO05D005306 1.7e-109 400.2 310 60.3
Medtr1g016970 Medicago truncatula HOM05D004712 ORTHO05D005306 2.9e-109 399.4 307 61.6
AL4G17960 Arabidopsis lyrata HOM05D004712 ORTHO05D005306 5.0e-109 398.7 309 62.5
Sabra06G0182200 Salix brachista HOM05D004712 ORTHO05D005306 5.0e-109 398.7 313 60.1
CARHR115280 Cardamine hirsuta HOM05D004712 ORTHO05D005306 6.5e-109 398.3 309 61.5
QL05p017569 Quercus lobata HOM05D004712 ORTHO05D005306 1.5e-108 397.1 311 60.1
DCAR_004451 Daucus carota HOM05D004712 ORTHO05D005306 4.2e-108 395.6 312 61.9
Peaxi162Scf00038g01243 Petunia axillaris HOM05D004712 ORTHO05D005306 9.4e-108 394.4 334 57.5
Zm00001eb356940 Zea mays HOM05D004712 ORTHO05D005306 1.6e-107 393.7 320 60.9
Duzib150G0899 Durio zibethinus HOM05D004712 ORTHO05D005306 2.1e-107 393.3 308 60.4
Nitab4.5_0005029g0040 Nicotiana tabacum HOM05D004712 ORTHO05D005306 6.1e-107 391.7 307 61.2
Nitab4.5_0000359g0220 Nicotiana tabacum HOM05D004712 ORTHO05D005306 1.8e-106 390.2 307 61.2
Zm00001eb159970 Zea mays HOM05D004712 ORTHO05D005306 1.8e-106 390.2 353 56.7
Nitab4.5_0005661g0020 Nicotiana tabacum HOM05D004712 ORTHO05D005306 2.3e-106 389.8 334 56.6
Rhsim12G0204300 Rhododendron simsii HOM05D004712 ORTHO05D005306 4.0e-106 389.0 315 59.7
arahy.Tifrunner.gnm1.ann1.QZ1T53 Arachis hypogaea HOM05D004712 ORTHO05D005306 2.0e-105 386.7 308 60.4
MELO3C010771.2 Cucumis melo HOM05D004712 ORTHO05D005306 7.5e-105 384.8 314 59.9
Sabra18G0050600 Salix brachista HOM05D004712 ORTHO05D005306 9.8e-105 384.4 342 54.7
arahy.Tifrunner.gnm1.ann1.289CQF Arachis hypogaea HOM05D004712 ORTHO05D005306 1.3e-104 384.0 308 60.1
HPP92_009150 Vanilla planifolia HOM05D004712 ORTHO05D005306 1.7e-104 383.6 307 61.2
PGSC0003DMG401002514 Solanum tuberosum HOM05D004712 ORTHO05D005306 2.8e-104 382.9 334 54.5
CAN.G20.6 Capsicum annuum HOM05D004712 ORTHO05D005306 3.7e-104 382.5 298 61.1
AUR62040203 Chenopodium quinoa HOM05D004712 ORTHO05D005306 3.1e-103 379.4 308 58.8
TWI34G1658 Tripterygium wilfordii HOM05D004712 ORTHO05D005306 7.0e-103 378.3 301 59.8
Haze_18228 Corylus avellana HOM05D004712 ORTHO05D005306 2.7e-102 376.3 315 60.0
Rhsim08G0230100 Rhododendron simsii HOM05D004712 ORTHO05D005306 2.7e-102 376.3 360 52.2
Nitab4.5_0010821g0020 Nicotiana tabacum HOM05D004712 ORTHO05D005306 5.6e-100 368.6 313 56.5
Cfa017921 Carpinus fangiana HOM05D004712 ORTHO05D005306 1.0e-98 364.4 315 57.8
Gorai.009G047400 Gossypium raimondii HOM05D004712 ORTHO05D005306 5.2e-98 362.1 272 62.5
vmacro05273 Vaccinium macrocarpon HOM05D004712 ORTHO05D005306 5.7e-97 358.6 330 53.9
Gohir.D03G057300 Gossypium hirsutum HOM05D004712 ORTHO05D005306 1.3e-96 357.5 321 53.3
Gohir.A02G116301 Gossypium hirsutum HOM05D004712 ORTHO05D005306 3.7e-96 355.9 305 54.8
AUR62031977 Chenopodium quinoa HOM05D004712 ORTHO05D005306 5.4e-95 352.1 304 52.0
Sed0015351 Sechium edule HOM05D004712 ORTHO05D005306 7.8e-94 348.2 306 55.2
Ah.10g034640 Amaranthus hybridus HOM05D004712 ORTHO05D005306 3.0e-93 346.3 326 54.0
MBI04_g12189_MAGBIO Magnolia biondii HOM05D004712 ORTHO05D005306 6.6e-93 345.1 341 54.0
Solyc03g121250.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 1.9e-92 343.6 282 58.2
Lj5A50G64 Lonicera japonica HOM05D004712 ORTHO05D005306 3.3e-92 342.8 293 56.7
Dinv30410 Davidia involucrata HOM05D004712 ORTHO05D005306 3.6e-91 339.3 265 61.5
AUR62040198 Chenopodium quinoa HOM05D004712 ORTHO05D005306 6.2e-91 338.6 289 57.1
Eucgr.C00628 Eucalyptus grandis HOM05D004712 ORTHO05D005306 1.0e-90 337.8 264 62.1
Lj7A695G32 Lonicera japonica HOM05D004712 ORTHO05D005306 8.9e-90 334.7 288 57.6
Manes.16G077100 Manihot esculenta HOM05D004712 ORTHO05D005306 1.1e-87 327.8 243 66.3
MD15G1062100 Malus domestica HOM05D004712 ORTHO05D005306 2.3e-85 320.1 342 49.4
Sopen03g040060 Solanum pennellii HOM05D004712 ORTHO05D005306 1.6e-83 313.9 286 53.8
Sopen01g026340 Solanum pennellii HOM05D000014 ORTHO05D005306 2.8e-83 313.2 299 51.2
Glyma.04G087900 Glycine max HOM05D004712 ORTHO05D005306 1.4e-79 300.8 322 50.3
vmacro17006 Vaccinium macrocarpon HOM05D004712 ORTHO05D005306 2.3e-77 293.5 384 42.2
CAN.G1143.35 Capsicum annuum HOM05D004712 ORTHO05D005306 4.0e-74 282.7 233 55.4
Carub.0004s0573 Capsella rubella HOM05D004712 ORTHO05D005306 4.6e-70 269.2 221 60.6
AUR62022272 Chenopodium quinoa HOM05D004712 ORTHO05D005306 1.6e-67 260.8 225 52.0
COL.COLO4_30565 Corchorus olitorius HOM05D004712 ORTHO05D005306 2.8e-67 260.0 241 52.7
unitig_748.g8268 Utricularia gibba HOM05D004712 ORTHO05D005306 9.3e-63 245.0 301 42.9
unitig_32.g10885 Utricularia gibba HOM05D004712 ORTHO05D005306 1.4e-55 221.1 268 45.1
Cpa.g.sc1834.1 Carica papaya HOM05D004712 ORTHO05D005306 6.9e-50 202.2 143 65.0
Solyc01g060200.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 1.2e-49 201.4 297 37.7
CDE06G1081 Ceratophyllum demersum HOM05D004712 ORTHO05D005306 9.9e-49 198.4 167 58.1
Gorai.003G060400 Gossypium raimondii HOM05D004712 ORTHO05D005306 5.6e-44 182.6 169 53.3
SGA_v2.0_scaffold88G27214 Striga asiatica HOM05D004712 ORTHO05D005306 1.2e-38 164.9 139 57.6
CDE06G1637 Ceratophyllum demersum HOM05D004712 ORTHO05D005306 1.1e-36 158.3 113 63.7
Cpa.g.c30793.3 Carica papaya HOM05D004712 ORTHO05D005306 3.1e-34 150.2 130 55.4
Glyma.20G062400 Glycine max HOM05D004712 ORTHO05D005306 4.3e-28 129.8 92 67.4
ATR0626G141 Amborella trichopoda HOM05D004712 ORTHO05D005306 7.7e-25 119.0 171 43.3
Cpa.g.sc131.11 Carica papaya HOM05D004712 ORTHO05D005306 2.4e-18 97.4 64 70.3
Cpa.g.sc131.8 Carica papaya HOM05D004712 ORTHO05D005306 5.3e-18 96.3 73 63.0
Hma1.2p1_0051F.1_g029750 Hydrangea macrophylla HOM05D004712 ORTHO05D005306 5.0e-16 89.7 66 62.1
COL.COLO4_30564 Corchorus olitorius HOM05D004712 ORTHO05D005306 1.4e-13 81.6 54 64.8
Cc04_g02330 Coffea canephora HOM05D004712 ORTHO05D005306 6.7e-13 79.3 49 67.3
MCO15G238 Micromonas commoda HOM05D015906 ORTHO05D005306 1.7e-11 74.7 222 27.5
Cpa.g.sc131.9 Carica papaya HOM05D004712 ORTHO05D005306 2.8e-11 73.9 77 45.5
TAR636G2080 Trochodendron aralioides HOM05D000850 ORTHO05D000266 8.2e-11 72.4 54 59.3
MCO09G663 Micromonas commoda HOM05D015906 ORTHO05D005306 2.9e-08 63.9 89 38.2
MSTRG.22613 Avicennia marina HOM05D004712 ORTHO05D005306 5.5e-07 59.7 64 43.8
Cre03.g205300 Chlamydomonas reinhardtii HOM05D062317 ORTHO05D140869 8.0e-06 55.8 185 28.6


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