Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_7930 Physcomitrium patens HOM05D005984 ORTHO05D007754 1.1e-281 972.6 503 100.0
Pp3c9_10350 Physcomitrium patens HOM05D005984 ORTHO05D007754 3.3e-204 715.3 436 89.0
SMO347G0352 Selaginella moellendorffii HOM05D005984 ORTHO05D007754 1.6e-150 537.0 355 74.6
Phvul.011G029800 Phaseolus vulgaris HOM05D005984 ORTHO05D007754 5.1e-149 531.9 357 74.5
ATR0618G114 Amborella trichopoda HOM05D005984 ORTHO05D007754 6.7e-149 531.6 366 73.2
FvH4_4g36890 Fragaria vesca HOM05D005984 ORTHO05D007754 2.6e-148 529.6 353 80.2
MD13G1005900 Malus domestica HOM05D005984 ORTHO05D007754 2.6e-148 529.6 373 71.8
VMungo1127G1047 Vigna mungo HOM05D005984 ORTHO05D007754 2.6e-148 529.6 356 74.4
Actinidia13710 Actinidia chinensis HOM05D005984 ORTHO05D007754 3.3e-148 529.3 405 65.7
Glyma.11G100800 Glycine max HOM05D005984 ORTHO05D007754 3.3e-148 529.3 370 71.9
arahy.Tifrunner.gnm1.ann1.0C6YUW Arachis hypogaea HOM05D005984 ORTHO05D007754 7.4e-148 528.1 426 64.6
FAN12G1392 Fragaria x ananassa HOM05D005984 ORTHO05D007754 9.7e-148 527.7 352 80.1
CSS0012805 Camellia sinensis var. sinensis HOM05D005984 ORTHO05D007754 1.3e-147 527.3 352 73.3
Sed0006813 Sechium edule HOM05D005984 ORTHO05D007754 1.3e-147 527.3 369 70.5
vmacro08597 Vaccinium macrocarpon HOM05D005984 ORTHO05D007754 2.2e-147 526.6 428 68.9
Actinidia38413 Actinidia chinensis HOM05D005984 ORTHO05D007754 2.8e-147 526.2 403 66.7
arahy.Tifrunner.gnm1.ann1.B6F48P Arachis hypogaea HOM05D005984 ORTHO05D007754 2.8e-147 526.2 434 64.1
Zm00001eb271820 Zea mays HOM05D005984 ORTHO05D007754 3.7e-147 525.8 383 69.2
AL6G34310 Arabidopsis lyrata HOM05D005984 ORTHO05D007754 4.8e-147 525.4 371 75.2
VMungo0647G2306 Vigna mungo HOM05D005984 ORTHO05D007754 4.8e-147 525.4 356 73.9
Glyma.12G026900 Glycine max HOM05D005984 ORTHO05D007754 6.3e-147 525.0 370 70.8
Hma1.2p1_0122F.1_g057600 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 8.2e-147 524.6 356 73.9
TAR629G1998 Trochodendron aralioides HOM05D005984 ORTHO05D007754 8.2e-147 524.6 355 73.5
Cfa008738 Carpinus fangiana HOM05D005984 ORTHO05D007754 1.1e-146 524.2 400 66.8
Os06g0729650 Oryza sativa ssp. japonica HOM05D005984 ORTHO05D007754 1.1e-146 524.2 350 72.6
GSVIVG01012045001 Vitis vinifera HOM05D005984 ORTHO05D007754 1.1e-146 524.2 380 69.7
A03p46390 Brassica napus HOM05D005984 ORTHO05D007754 1.4e-146 523.9 358 72.6
C07p44410 Brassica napus HOM05D005984 ORTHO05D007754 1.4e-146 523.9 358 72.6
BraA03t13765Z Brassica rapa HOM05D005984 ORTHO05D007754 1.4e-146 523.9 358 72.6
RcHm_v2.0_Chr4g0446671 Rosa chinensis HOM05D005984 ORTHO05D007754 1.4e-146 523.9 358 78.5
TPR.G32343 Trifolium pratense HOM05D005984 ORTHO05D007754 1.4e-146 523.9 356 73.6
AT5G23120 Arabidopsis thaliana HOM05D005984 ORTHO05D007754 1.8e-146 523.5 357 73.1
Sed0023953 Sechium edule HOM05D005984 ORTHO05D007754 1.8e-146 523.5 412 69.9
BolC7t44963H Brassica oleracea HOM05D005984 ORTHO05D007754 3.1e-146 522.7 358 72.6
ClCG09G004540 Citrullus lanatus HOM05D005984 ORTHO05D007754 3.1e-146 522.7 357 72.0
ECA246G1868 Erigeron canadensis HOM05D005984 ORTHO05D007754 3.1e-146 522.7 350 79.4
Lj3g0024041 Lotus japonicus HOM05D005984 ORTHO05D007754 3.1e-146 522.7 354 79.1
Medtr4g075040 Medicago truncatula HOM05D005984 ORTHO05D007754 4.1e-146 522.3 356 73.3
PGSC0003DMG400002324 Solanum tuberosum HOM05D005984 ORTHO05D007754 4.1e-146 522.3 361 72.0
Aqoxy3G04258 Aquilegia oxysepala HOM05D005984 ORTHO05D007754 5.3e-146 521.9 395 66.8
CsaV3_7G030600 Cucumis sativus L. HOM05D005984 ORTHO05D007754 5.3e-146 521.9 372 70.2
Carub.0006s2091 Capsella rubella HOM05D005984 ORTHO05D007754 6.9e-146 521.5 357 72.8
Cpa.g.sc44.38 Carica papaya HOM05D005984 ORTHO05D007754 6.9e-146 521.5 368 70.9
Thhalv10004338m.g Eutrema salsugineum HOM05D005984 ORTHO05D007754 6.9e-146 521.5 357 72.8
TWI53G1952 Tripterygium wilfordii HOM05D005984 ORTHO05D007754 6.9e-146 521.5 374 70.1
CDE07G0658 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 9.1e-146 521.2 329 80.5
Aa31LG11G2610 Aethionema arabicum HOM05D005984 ORTHO05D007754 1.2e-145 520.8 358 77.4
Psat7g177360 Pisum sativum HOM05D005984 ORTHO05D007754 1.2e-145 520.8 356 72.8
CANSAT56G2432 Cannabis sativa HOM05D005984 ORTHO05D007754 1.5e-145 520.4 349 77.9
AUR62017696 Chenopodium quinoa HOM05D005984 ORTHO05D007754 1.5e-145 520.4 354 77.7
Thecc.02G160200 Theobroma cacao HOM05D005984 ORTHO05D007754 1.5e-145 520.4 358 72.9
CAN.G157.24 Capsicum annuum HOM05D005984 ORTHO05D007754 2.0e-145 520.0 360 71.9
Sp2g24000 Schrenkiella parvula HOM05D005984 ORTHO05D007754 2.0e-145 520.0 358 77.7
DCAR_002576 Daucus carota HOM05D005984 ORTHO05D007754 2.6e-145 519.6 359 71.3
Lalb_Chr03g0024761 Lupinus albus HOM05D005984 ORTHO05D007754 4.5e-145 518.8 363 76.6
Sopen02g003530 Solanum pennellii HOM05D005984 ORTHO05D007754 4.5e-145 518.8 363 71.3
Ciclev10031672m.g Citrus clementina HOM05D005984 ORTHO05D007754 5.9e-145 518.5 356 75.3
CARHR190410 Cardamine hirsuta HOM05D005984 ORTHO05D007754 7.7e-145 518.1 357 77.9
Prupe.1G347100 Prunus persica HOM05D005984 ORTHO05D007754 7.7e-145 518.1 372 75.5
Gohir.D02G187800 Gossypium hirsutum HOM05D005984 ORTHO05D007754 1.0e-144 517.7 359 71.9
Atru.chr11.1117 Acer truncatum HOM05D005984 ORTHO05D007754 1.3e-144 517.3 354 77.1
Lsat_1_v5_gn_3_35480 Lactuca sativa HOM05D005984 ORTHO05D007754 1.3e-144 517.3 350 78.6
Gorai.005G210500 Gossypium raimondii HOM05D005984 ORTHO05D007754 1.7e-144 516.9 359 71.6
PSO063G6567 Papaver somniferum HOM05D005984 ORTHO05D007754 2.2e-144 516.5 354 72.3
CiPaw.06G060100 Carya illinoinensis HOM05D005984 ORTHO05D007754 2.9e-144 516.2 371 68.7
PGR044G2022 Punica granatum HOM05D005984 ORTHO05D007754 2.9e-144 516.2 361 71.2
Cc11_g02280 Coffea canephora HOM05D005984 ORTHO05D007754 3.8e-144 515.8 341 73.3
Sabra07G0060100 Salix brachista HOM05D005984 ORTHO05D007754 3.8e-144 515.8 329 75.1
Manes.04G064200 Manihot esculenta HOM05D005984 ORTHO05D007754 5.0e-144 515.4 329 80.5
Manes.11G108100 Manihot esculenta HOM05D005984 ORTHO05D007754 5.0e-144 515.4 349 78.8
PSO782G0234 Papaver somniferum HOM05D005984 ORTHO05D007754 5.0e-144 515.4 354 72.0
AUR62015232 Chenopodium quinoa HOM05D005984 ORTHO05D007754 6.5e-144 515.0 327 81.3
AUR62015234 Chenopodium quinoa HOM05D005984 ORTHO05D007754 6.5e-144 515.0 327 81.3
FAN07G1379 Fragaria x ananassa HOM05D005984 ORTHO05D007754 6.5e-144 515.0 378 74.6
Gohir.A03G164600 Gossypium hirsutum HOM05D005984 ORTHO05D007754 6.5e-144 515.0 424 65.3
Potri.007G071300 Populus trichocarpa HOM05D005984 ORTHO05D007754 8.5e-144 514.6 329 74.8
Mapoly0020s0149 Marchantia polymorpha HOM05D005984 ORTHO05D007754 1.1e-143 514.2 438 61.2
THA.LOC104800911 Tarenaya hassleriana HOM05D005984 ORTHO05D007754 1.4e-143 513.8 356 72.2
MD16G1002000 Malus domestica HOM05D005984 ORTHO05D007754 1.9e-143 513.5 370 76.2
Dinv11718 Davidia involucrata HOM05D005984 ORTHO05D007754 3.2e-143 512.7 373 73.7
Ca_19021_v3 Cicer arietinum L. HOM05D005984 ORTHO05D007754 4.2e-143 512.3 378 69.0
Haze_11755 Corylus avellana HOM05D005984 ORTHO05D007754 5.5e-143 511.9 381 68.2
Duzib052G0297 Durio zibethinus HOM05D005984 ORTHO05D007754 9.4e-143 511.1 358 71.2
Eucgr.J00865 Eucalyptus grandis HOM05D005984 ORTHO05D007754 1.6e-142 510.4 349 76.5
MSTRG.431 Avicennia marina HOM05D005984 ORTHO05D007754 2.1e-142 510.0 360 69.7
HPP92_012878 Vanilla planifolia HOM05D005984 ORTHO05D007754 7.9e-142 508.1 370 69.5
SGA_v2.0_scaffold88G27230 Striga asiatica HOM05D005984 ORTHO05D007754 1.4e-141 507.3 379 71.8
Lj3A850G95 Lonicera japonica HOM05D005984 ORTHO05D007754 3.9e-141 505.8 412 63.3
unitig_8.g2892 Utricularia gibba HOM05D005984 ORTHO05D007754 2.6e-140 503.1 363 68.6
EL10Ac9g22946 Beta vulgaris HOM05D005984 ORTHO05D007754 3.3e-140 502.7 369 68.8
Oeu026903.3 Olea europaea HOM05D005984 ORTHO05D007754 5.7e-140 501.9 399 67.9
COL.COLO4_19602 Corchorus olitorius HOM05D005984 ORTHO05D007754 1.3e-139 500.7 400 64.5
Nn3g18651 Nelumbo nucifera HOM05D005984 ORTHO05D007754 1.2e-137 494.2 328 73.5
MELO3C023596.2 Cucumis melo HOM05D005984 ORTHO05D007754 6.5e-136 488.4 335 71.0
Migut.E00699 Erythranthe guttata HOM05D005984 ORTHO05D007754 8.5e-136 488.0 358 67.9
HanXRQChr06g0171511 Helianthus annuus HOM05D005984 ORTHO05D007754 1.1e-135 487.6 336 76.2
HanXRQChr17g0544921 Helianthus annuus HOM05D005984 ORTHO05D007754 1.1e-135 487.6 327 78.9
Rhsim04G0167300 Rhododendron simsii HOM05D005984 ORTHO05D007754 1.1e-135 487.6 360 70.0
Hund08579 Selenicereus undatus HOM05D005984 ORTHO05D007754 1.9e-135 486.9 363 69.1
Solyc02g014150.4 Solanum lycopersicum HOM05D005984 ORTHO05D007754 2.1e-134 483.4 340 70.3
QL03p045967 Quercus lobata HOM05D005984 ORTHO05D007754 2.6e-132 476.5 446 57.0
SalBow2G1456 Salvia bowleyana HOM05D005984 ORTHO05D007754 6.3e-131 471.9 448 60.5
Sc10g0006780 Simmondsia chinensis HOM05D005984 ORTHO05D007754 1.1e-130 471.1 327 70.3
Nitab4.5_0000133g0050 Nicotiana tabacum HOM05D005984 ORTHO05D007754 1.9e-127 460.3 506 54.5
Ah.01g001560 Amaranthus hybridus HOM05D005984 ORTHO05D007754 8.0e-126 454.9 355 65.6
CBR_g11122 Chara braunii HOM05D005984 ORTHO05D007754 5.7e-124 448.7 389 65.3
Nitab4.5_0006277g0020 Nicotiana tabacum HOM05D005984 ORTHO05D007754 4.1e-122 442.6 540 50.7
CDE04G0799 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 1.2e-121 441.0 413 63.2
AagrBONN_evm.TU.Sc2ySwM_369.365 Anthoceros agrestis HOM05D005984 ORTHO05D007754 6.3e-115 418.7 384 62.5
Peaxi162Scf00363g00317 Petunia axillaris HOM05D005984 ORTHO05D007754 8.3e-115 418.3 486 52.9
MCO05G498 Micromonas commoda HOM05D005984 ORTHO05D007754 7.0e-106 388.7 413 54.7
FAN17G0887 Fragaria x ananassa HOM05D005984 ORTHO05D007754 8.0e-102 375.2 387 58.9
Cre06.g273700 Chlamydomonas reinhardtii HOM05D005984 ORTHO05D007754 1.2e-100 371.3 362 59.1
Dinv01185 Davidia involucrata HOM05D005984 ORTHO05D007754 3.2e-98 363.2 203 85.7
Hma1.2p1_0122F.1_g057590 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 1.3e-88 331.3 209 76.6
PRCOL_00000217 Prasinoderma coloniale HOM05D005984 ORTHO05D007754 1.9e-79 300.8 294 56.8
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 1.5e-68 264.6 368 44.8
MD15G1106700 Malus domestica HOM05D005984 ORTHO05D007754 3.4e-52 210.3 114 86.0
C09p07860 Brassica napus HOM05D005984 ORTHO05D007754 3.3e-47 193.7 181 59.7
SEGI_34707 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 5.1e-40 169.9 122 68.9
MD00G1043400 Malus domestica HOM05D005984 ORTHO05D007754 2.2e-38 164.5 111 74.8
BcaB04g19886 Brassica carinata HOM05D005984 ORTHO05D007754 3.2e-34 150.6 210 47.1
HanXRQChr10g0318441 Helianthus annuus HOM05D005984 ORTHO05D007754 1.7e-27 128.3 69 81.2
arahy.Tifrunner.gnm1.ann1.25R2K9 Arachis hypogaea HOM05D005984 ORTHO05D014444 5.2e-24 116.7 85 64.7
AUR62024854 Chenopodium quinoa HOM05D005984 ORTHO05D007754 5.2e-24 116.7 73 79.5
arahy.Tifrunner.gnm1.ann1.B9R6EW Arachis hypogaea HOM05D005984 ORTHO05D014444 7.4e-23 112.8 84 63.1
SEGI_27749 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 5.5e-18 96.7 53 79.2
MBI03_g15323_MAGBIO Magnolia biondii HOM05D002934 ORTHO05D003937 1.2e-15 89.0 92 52.2
C09p07870 Brassica napus HOM05D005984 ORTHO05D042888 3.7e-14 84.0 98 45.9
Zm00001eb227280 Zea mays HOM05D005984 ORTHO05D007754 1.7e-11 75.1 62 62.9
Pp3c24_8290 Physcomitrium patens HOM05D013586 ORTHO05D011470 2.2e-11 74.7 38 86.8
BolC9t53702H Brassica oleracea HOM05D005984 ORTHO05D042888 1.1e-10 72.4 63 57.1
Glyma.01G000174 Glycine max HOM05D036214 ORTHO05D007754 2.3e-08 64.7 43 72.1
Glyma.06G237300 Glycine max HOM05D005984 ORTHO05D007754 6.8e-08 63.2 70 51.4
SGA_v2.0_scaffold57G20111 Striga asiatica HOM05D005984 ORTHO05D402503 1.7e-06 58.5 44 59.1


User provided reference genes

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