Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_14710 Physcomitrium patens HOM05D000006 ORTHO05D004030 1.9e-114 416.0 232 100.0
Pp3c4_18030 Physcomitrium patens HOM05D000006 ORTHO05D004030 1.1e-37 161.0 428 32.9
Manes.18G072700 Manihot esculenta HOM05D000006 ORTHO05D004030 8.4e-30 134.8 298 34.2
Mapoly0014s0119 Marchantia polymorpha HOM05D000006 ORTHO05D004030 5.5e-29 132.1 76 86.8
Gohir.D04G003466 Gossypium hirsutum HOM05D000006 ORTHO05D004030 7.1e-29 131.7 76 85.5
Nn5g28927 Nelumbo nucifera HOM05D000006 ORTHO05D004030 7.1e-29 131.7 269 34.2
CBR_g17677 Chara braunii HOM05D000006 ORTHO05D004030 1.6e-28 130.6 76 84.2
arahy.Tifrunner.gnm1.ann1.6W1W5K Arachis hypogaea HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
arahy.Tifrunner.gnm1.ann1.B54JNT Arachis hypogaea HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Ca_14036_v3 Cicer arietinum L. HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Ciclev10001133m.g Citrus clementina HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
DCAR_014281 Daucus carota HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Duzib116G0798 Durio zibethinus HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
FvH4_5g38850 Fragaria vesca HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
FAN04G0021 Fragaria x ananassa HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
FAN18G2681 Fragaria x ananassa HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Glyma.04G130300 Glycine max HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Glyma.06G316400 Glycine max HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Gohir.A05G231900 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Gohir.A06G040700 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Gohir.D05G234200 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Gohir.D06G041700 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Gorai.009G242400 Gossypium raimondii HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Gorai.010G046900 Gossypium raimondii HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Lj7C307G3 Lonicera japonica HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Lj3g0019564 Lotus japonicus HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Medtr3g007710 Medicago truncatula HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Oeu001989.1 Olea europaea HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Phvul.005G010700 Phaseolus vulgaris HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Phvul.005G011500 Phaseolus vulgaris HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Psat5g230080 Pisum sativum HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Prupe.1G506200 Prunus persica HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
RcHm_v2.0_Chr7g0240841 Rosa chinensis HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
SalBow7G0198 Salvia bowleyana HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
SalBow7G3631 Salvia bowleyana HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Thecc.08G116400 Theobroma cacao HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
TWI79G1190 Tripterygium wilfordii HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
VMungo1080G1349 Vigna mungo HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
GSVIVG01008945001 Vitis vinifera HOM05D000006 ORTHO05D004030 2.7e-28 129.8 76 84.2
Sp6g33660 Schrenkiella parvula HOM05D000006 ORTHO05D004030 3.5e-28 129.4 76 84.2
CiPaw.05G229200 Carya illinoinensis HOM05D000006 ORTHO05D004030 4.6e-28 129.0 77 81.8
CiPaw.06G024600 Carya illinoinensis HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
Cc04_g08910 Coffea canephora HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
COL.COLO4_21821 Corchorus olitorius HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
FAN08G2703 Fragaria x ananassa HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
Lalb_Chr18g0049021 Lupinus albus HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
Oeu039581.2 Olea europaea HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
Potri.002G089500 Populus trichocarpa HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
Potri.005G171700 Populus trichocarpa HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
Sabra05G0129200 Salix brachista HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
Sc01g0001570 Simmondsia chinensis HOM05D000006 ORTHO05D004030 6.0e-28 128.6 76 82.9
Actinidia03495 Actinidia chinensis HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
Aa31LG3G17360 Aethionema arabicum HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
AL6G20140 Arabidopsis lyrata HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
BcaB08g37162 Brassica carinata HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
BcaB08g37191 Brassica carinata HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
A10p27700 Brassica napus HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
C09p67790 Brassica napus HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
BolC9t59541H Brassica oleracea HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
BraA10t44822Z Brassica rapa HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
AUR62004690 Chenopodium quinoa HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
AUR62023606 Chenopodium quinoa HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
Haze_00526 Corylus avellana HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
Thhalv10013550m.g Eutrema salsugineum HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
FAN13G0359 Fragaria x ananassa HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
SalBow6G6076 Salvia bowleyana HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
Hund16820 Selenicereus undatus HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
THA.LOC104799527 Tarenaya hassleriana HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
THA.LOC104819319 Tarenaya hassleriana HOM05D000006 ORTHO05D004030 7.9e-28 128.3 76 82.9
Atru.chr13.1315 Acer truncatum HOM05D000006 ORTHO05D004030 1.0e-27 127.9 76 82.9
Atru.chr13.1359 Acer truncatum HOM05D000006 ORTHO05D004030 1.0e-27 127.9 76 82.9
Cpa.g.sc42.141 Carica papaya HOM05D000006 ORTHO05D004030 1.0e-27 127.9 76 82.9
Dinv26721 Davidia involucrata HOM05D000006 ORTHO05D004030 1.0e-27 127.9 76 82.9
MD08G1173300 Malus domestica HOM05D000006 ORTHO05D004030 1.0e-27 127.9 76 82.9
MD15G1358600 Malus domestica HOM05D000006 ORTHO05D004030 1.0e-27 127.9 76 82.9
TPR.G12257 Trifolium pratense HOM05D000006 ORTHO05D004030 1.0e-27 127.9 76 82.9
AL8G42020 Arabidopsis lyrata HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
AT5G64610 Arabidopsis thaliana HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
MSTRG.22428 Avicennia marina HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
BcaB04g19978 Brassica carinata HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
BcaC04g23307 Brassica carinata HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
A09p08740 Brassica napus HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
C09p09880 Brassica napus HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
BolC9t53896H Brassica oleracea HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
BraA09t36523Z Brassica rapa HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
Carub.0008s2540 Capsella rubella HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
CARHR278580 Cardamine hirsuta HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
Thhalv10004220m.g Eutrema salsugineum HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
Gorai.012G004600 Gossypium raimondii HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
Sabra02G0070500 Salix brachista HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 81.6
Sp2g27670 Schrenkiella parvula HOM05D000006 ORTHO05D004030 1.3e-27 127.5 76 82.9
MSTRG.24147 Avicennia marina HOM05D000006 ORTHO05D004030 1.8e-27 127.1 76 82.9
EL10Ac1g00041 Beta vulgaris HOM05D000006 ORTHO05D004030 1.8e-27 127.1 76 81.6
Cfa015957 Carpinus fangiana HOM05D000006 ORTHO05D004030 1.8e-27 127.1 76 81.6
Migut.N03322 Erythranthe guttata HOM05D000006 ORTHO05D004030 1.8e-27 127.1 76 81.6
Rhsim11G0065000 Rhododendron simsii HOM05D000006 ORTHO05D004030 1.8e-27 127.1 76 81.6
SGA_v2.0_scaffold25G11094 Striga asiatica HOM05D000006 ORTHO05D004030 1.8e-27 127.1 76 81.6
unitig_21.g20189 Utricularia gibba HOM05D000006 ORTHO05D004030 1.8e-27 127.1 76 81.6
vmacro12808 Vaccinium macrocarpon HOM05D000006 ORTHO05D004030 1.8e-27 127.1 76 81.6
CSS0012091 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D004030 2.3e-27 126.7 76 81.6
HPP92_004738 Vanilla planifolia HOM05D000006 ORTHO05D004030 2.3e-27 126.7 76 81.6
Aa31LG1G17340 Aethionema arabicum HOM05D000006 ORTHO05D004030 3.9e-27 125.9 76 81.6
CAN.G255.14 Capsicum annuum HOM05D000006 ORTHO05D004030 3.9e-27 125.9 76 80.3
MBI04_g34117_MAGBIO Magnolia biondii HOM05D000006 ORTHO05D004030 3.9e-27 125.9 76 80.3
Nitab4.5_0000051g0130 Nicotiana tabacum HOM05D000006 ORTHO05D004030 3.9e-27 125.9 76 80.3
Nitab4.5_0002496g0060 Nicotiana tabacum HOM05D000006 ORTHO05D004030 3.9e-27 125.9 76 80.3
Peaxi162Scf00360g00314 Petunia axillaris HOM05D000006 ORTHO05D004030 3.9e-27 125.9 76 80.3
Solyc11g013520.3 Solanum lycopersicum HOM05D000006 ORTHO05D004030 3.9e-27 125.9 76 80.3
Sopen11g008540 Solanum pennellii HOM05D000006 ORTHO05D004030 3.9e-27 125.9 76 80.3
HanXRQChr02g0044231 Helianthus annuus HOM05D000006 ORTHO05D004030 5.1e-27 125.6 76 80.3
Lsat_1_v5_gn_1_12240 Lactuca sativa HOM05D000006 ORTHO05D004030 5.1e-27 125.6 76 80.3
Lj4A550G32 Lonicera japonica HOM05D000006 ORTHO05D004030 5.1e-27 125.6 76 80.3
Lj4A578G72 Lonicera japonica HOM05D000006 ORTHO05D004030 5.1e-27 125.6 76 80.3
QL05p058776 Quercus lobata HOM05D000006 ORTHO05D004030 5.1e-27 125.6 76 81.6
AT5G09740 Arabidopsis thaliana HOM05D000006 ORTHO05D004030 6.7e-27 125.2 76 80.3
CANSAT56G0745 Cannabis sativa HOM05D000006 ORTHO05D004030 8.7e-27 124.8 76 80.3
TAR381G0924 Trochodendron aralioides HOM05D000006 ORTHO05D004030 8.7e-27 124.8 76 80.3
MELO3C022788.2 Cucumis melo HOM05D000006 ORTHO05D004030 1.1e-26 124.4 76 80.3
CsaV3_5G023540 Cucumis sativus L. HOM05D000006 ORTHO05D004030 1.1e-26 124.4 76 80.3
PGR142G3648 Punica granatum HOM05D000006 ORTHO05D004030 1.1e-26 124.4 76 78.9
Sed0027470 Sechium edule HOM05D000006 ORTHO05D004030 1.1e-26 124.4 77 77.9
Sc23g0000920 Simmondsia chinensis HOM05D000006 ORTHO05D004030 1.1e-26 124.4 76 78.9
Zm00001eb328000 Zea mays HOM05D000006 ORTHO05D004030 1.1e-26 124.4 76 78.9
Dinv27386 Davidia involucrata HOM05D000006 ORTHO05D004030 1.5e-26 124.0 76 80.3
Actinidia23042 Actinidia chinensis HOM05D000006 ORTHO05D004030 1.9e-26 123.6 76 78.9
Nn1g05200 Nelumbo nucifera HOM05D000006 ORTHO05D004030 1.9e-26 123.6 76 78.9
SMO351G0268 Selaginella moellendorffii HOM05D000006 ORTHO05D004030 1.9e-26 123.6 76 78.9
TAR625G0616 Trochodendron aralioides HOM05D000006 ORTHO05D004030 1.9e-26 123.6 76 78.9
Aqoxy5G01525 Aquilegia oxysepala HOM05D000006 ORTHO05D004030 2.5e-26 123.2 76 78.9
ECA247G3040 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.5e-26 123.2 76 78.9
Ah.05g172680 Amaranthus hybridus HOM05D000006 ORTHO05D004030 4.3e-26 122.5 88 70.5
ATR0564G159 Amborella trichopoda HOM05D000006 ORTHO05D004030 5.7e-26 122.1 76 77.6
AagrBONN_evm.TU.Sc2ySwM_344.1570 Anthoceros agrestis HOM05D000006 ORTHO05D004030 5.7e-26 122.1 76 78.9
arahy.Tifrunner.gnm1.ann1.D5YD9F Arachis hypogaea HOM05D000006 ORTHO05D004030 5.7e-26 122.1 76 80.3
CDE02G1825 Ceratophyllum demersum HOM05D000006 ORTHO05D004030 5.7e-26 122.1 76 77.6
Eucgr.F04379 Eucalyptus grandis HOM05D000006 ORTHO05D004030 5.7e-26 122.1 76 77.6
Os07g0626600 Oryza sativa ssp. japonica HOM05D000006 ORTHO05D004030 5.7e-26 122.1 76 77.6
PSO210G6583 Papaver somniferum HOM05D000006 ORTHO05D004030 5.7e-26 122.1 76 77.6
PSO447G0296 Papaver somniferum HOM05D000006 ORTHO05D004030 5.7e-26 122.1 76 77.6
SEGI_25942 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 2.8e-25 119.8 76 73.7
ClCG03G009080 Citrullus lanatus HOM05D000006 ORTHO05D004030 5.3e-24 115.5 99 61.6
CAN.G1733.7 Capsicum annuum HOM05D000006 ORTHO05D004030 7.6e-23 111.7 76 73.7
PRCOL_00001934 Prasinoderma coloniale HOM05D000006 ORTHO05D004030 2.5e-21 106.7 76 67.1
Cre03.g143907 Chlamydomonas reinhardtii HOM05D000006 ORTHO05D004030 3.9e-19 99.4 76 67.1
arahy.Tifrunner.gnm1.ann1.10Y5RS Arachis hypogaea HOM05D000006 ORTHO05D004030 1.9e-18 97.1 67 73.1
Mapoly0014s0220 Marchantia polymorpha HOM05D000006 ORTHO05D004030 2.5e-18 96.7 77 62.3
Haze_27167 Corylus avellana HOM05D000006 ORTHO05D004030 8.2e-17 91.7 77 57.1
MCO10G273 Micromonas commoda HOM05D000006 ORTHO05D004030 8.2e-17 91.7 77 61.0
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 6.9e-16 88.6 76 57.9
SEGI_24978 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 6.9e-16 88.6 75 58.7
Cre13.g587150 Chlamydomonas reinhardtii HOM05D000006 ORTHO05D004030 2.6e-15 86.7 75 57.3
Gorai.011G166000 Gossypium raimondii HOM05D000006 ORTHO05D004030 5.9e-15 85.5 89 58.4
arahy.Tifrunner.gnm1.ann1.B34789 Arachis hypogaea HOM05D000006 ORTHO05D004030 6.5e-14 82.0 53 77.4
arahy.Tifrunner.gnm1.ann1.KN38JA Arachis hypogaea HOM05D000006 ORTHO05D004030 6.5e-14 82.0 53 77.4
Haze_26687 Corylus avellana HOM05D000006 ORTHO05D004030 4.2e-13 79.3 78 53.8
Aqoxy6G00495 Aquilegia oxysepala HOM05D000006 ORTHO05D004030 1.2e-12 77.8 75 54.7
MCO10G130 Micromonas commoda HOM05D000006 ORTHO05D004030 1.6e-12 77.4 76 48.7
PRCOL_00006094 Prasinoderma coloniale HOM05D000006 ORTHO05D004030 1.6e-12 77.4 92 43.5
SEGI_07614 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 4.7e-12 75.9 51 66.7
MCO09G855 Micromonas commoda HOM05D000006 ORTHO05D004030 1.8e-11 73.9 87 40.2
CDE02G1028 Ceratophyllum demersum HOM05D000006 ORTHO05D004030 5.1e-11 72.4 51 64.7
Cfa025466 Carpinus fangiana HOM05D000006 ORTHO05D004030 8.8e-11 71.6 71 46.5
Haze_26200 Corylus avellana HOM05D000006 ORTHO05D004030 1.5e-10 70.9 72 44.4
Duzib093G0061 Durio zibethinus HOM05D000006 ORTHO05D004030 4.4e-10 69.3 77 49.4
Cpa.g.sc42.140 Carica papaya HOM05D000006 ORTHO05D004030 1.3e-09 67.8 77 49.4
Zm00001eb109790 Zea mays HOM05D000006 ORTHO05D004030 2.2e-09 67.0 52 63.5
CARHR203660 Cardamine hirsuta HOM05D000006 ORTHO05D004030 6.3e-09 65.5 51 56.9
EL10Ac6g13852 Beta vulgaris HOM05D000006 ORTHO05D004030 1.1e-08 64.7 51 58.8
DCAR_031231 Daucus carota HOM05D000006 ORTHO05D004030 1.1e-08 64.7 33 90.9
SEGI_16294 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 3.1e-08 63.2 61 50.8
Gorai.010G134900 Gossypium raimondii HOM05D000006 ORTHO05D047897 5.3e-08 62.4 35 80.0
Gohir.D08G161533 Gossypium hirsutum HOM05D000006 ORTHO05D047897 7.0e-08 62.0 35 80.0
TAR628G0303 Trochodendron aralioides HOM05D000006 ORTHO05D004030 9.1e-08 61.6 105 37.1
BcaC01g02690 Brassica carinata HOM05D000006 ORTHO05D004030 1.0e-06 58.2 73 50.7
Pp3c2_37980 Physcomitrium patens HOM05D000006 ORTHO05D004030 2.2e-06 57.0 72 43.1


User provided reference genes

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