Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 1.1e-281 972.6 484 100.0
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 3.1e-268 927.9 484 93.8
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 8.3e-221 770.4 484 78.1
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 1.2e-198 696.8 481 70.9
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 7.5e-198 694.1 487 71.3
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 1.3e-197 693.3 485 72.0
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 4.9e-197 691.4 489 69.7
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 8.3e-197 690.6 489 69.9
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 1.4e-196 689.9 480 70.6
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 1.0e-194 683.7 486 70.0
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 3.0e-194 682.2 489 69.1
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 6.6e-194 681.0 491 68.6
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 1.1e-193 680.2 485 69.1
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.5e-193 679.9 485 69.5
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 1.5e-193 679.9 485 69.1
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 1.9e-193 679.5 495 67.5
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 8.1e-192 674.1 485 68.0
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 2.3e-191 672.5 488 70.1
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 6.8e-191 671.0 485 68.2
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 8.9e-191 670.6 485 67.8
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.5e-190 669.8 487 68.8
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 3.4e-190 668.7 485 68.5
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 1.7e-189 666.4 485 67.0
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.2e-187 660.2 485 67.4
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 1.6e-187 659.8 485 66.8
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 7.8e-187 657.5 483 67.9
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 5.1e-186 654.8 489 68.1
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 6.6e-186 654.4 487 68.2
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 2.5e-185 652.5 492 66.5
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 3.3e-185 652.1 492 67.7
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 4.3e-185 651.7 488 67.2
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 5.6e-185 651.4 489 67.9
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 5.6e-185 651.4 483 67.1
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 3.6e-184 648.7 489 65.4
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 6.2e-184 647.9 487 65.3
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 1.1e-183 647.1 497 65.6
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 1.5e-182 643.3 481 66.1
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 1.5e-182 643.3 483 66.7
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 1.7e-181 639.8 483 66.3
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 2.2e-181 639.4 489 64.8
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 3.8e-181 638.6 487 65.3
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 2.4e-180 636.0 501 64.1
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 2.1e-179 632.9 484 65.9
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 3.5e-179 632.1 498 63.5
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 4.6e-179 631.7 491 65.8
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 6.0e-179 631.3 499 63.1
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 6.0e-179 631.3 489 64.8
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 3.9e-178 628.6 489 64.0
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 6.6e-178 627.9 483 65.4
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 1.1e-177 627.1 496 64.7
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 1.5e-177 626.7 493 62.9
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 2.5e-177 625.9 488 62.9
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 2.5e-177 625.9 488 64.1
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 5.6e-177 624.8 487 64.5
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 9.6e-177 624.0 487 64.5
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 9.6e-177 624.0 488 66.4
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 4.7e-176 621.7 493 61.9
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 1.1e-175 620.5 488 64.8
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 1.8e-175 619.8 498 62.0
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 3.1e-175 619.0 485 63.7
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 4.0e-175 618.6 498 61.6
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 5.2e-175 618.2 487 64.3
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 6.9e-175 617.8 473 63.4
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 9.0e-175 617.5 486 63.6
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.5e-174 616.7 486 63.6
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 5.8e-174 614.8 498 61.8
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 1.3e-173 613.6 500 61.4
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 1.7e-173 613.2 498 61.6
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 1.7e-173 613.2 500 61.4
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 2.2e-173 612.8 498 62.4
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 2.9e-173 612.5 482 63.7
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.7e-170 603.2 507 62.1
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 5.1e-170 601.7 486 62.1
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 2.9e-165 585.9 486 61.9
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 1.9e-161 573.2 425 63.1
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 9.0e-159 564.3 487 59.5
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 1.5e-158 563.5 424 62.5
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 8.4e-157 557.8 373 72.4
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 1.1e-156 557.4 483 59.8
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 9.3e-156 554.3 423 63.1
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 4.6e-155 552.0 486 59.9
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 5.1e-154 548.5 502 57.4
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 4.3e-145 518.8 319 77.7
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 5.7e-145 518.5 380 67.6
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 5.5e-140 501.9 384 62.0
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 3.6e-139 499.2 339 69.3
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.2e-131 474.2 468 50.2
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 8.8e-130 468.0 317 68.1
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 1.8e-122 443.7 419 51.1
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 1.0e-114 417.9 472 46.0
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.6e-102 377.5 255 71.0
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 6.6e-101 372.1 427 45.7
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 7.5e-97 358.6 299 59.5
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 1.7e-93 347.4 500 38.2
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.1e-92 344.7 357 50.4
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 1.1e-92 344.7 391 45.8
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 2.8e-91 340.1 240 66.7
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 1.0e-90 338.2 287 61.7
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 2.6e-89 333.6 438 40.6
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 2.2e-88 330.5 282 61.3
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 6.4e-88 328.9 319 54.5
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 1.0e-85 321.6 269 59.1
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 1.7e-85 320.9 398 41.2
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 8.3e-80 302.0 450 38.9
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 6.0e-78 295.8 210 64.8
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.5e-76 290.4 251 59.4
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 2.4e-66 257.3 204 63.7
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 1.7e-64 251.1 236 55.5
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 7.1e-55 219.2 181 56.9
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 9.0e-50 202.2 201 58.7
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 3.4e-49 200.3 117 79.5
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 4.2e-47 193.4 117 77.8
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 9.9e-41 172.2 142 61.3
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 9.3e-31 139.0 108 66.7
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 4.3e-28 130.2 117 56.4
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 9.7e-28 129.0 100 62.0
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 2.6e-09 67.8 201 28.4
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 4.5e-09 67.0 44 68.2
MD06G1154400 Malus domestica HOM05D006543 ORTHO05D008308 5.9e-09 66.6 201 28.4
Actinidia26749 Actinidia chinensis HOM05D006543 ORTHO05D008308 3.8e-08 63.9 48 62.5
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 2.5e-07 61.2 31 87.1
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 2.7e-06 57.8 52 59.6
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 2.7e-06 57.8 52 59.6


User provided reference genes

Program Settings