Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 4.7e-177 624.4 312 100.0
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 1.3e-134 483.4 315 77.8
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 7.1e-133 477.6 314 75.8
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 7.1e-133 477.6 314 75.8
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 4.6e-132 474.9 317 77.0
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 3.9e-131 471.9 264 90.2
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 3.3e-130 468.8 311 75.9
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 1.5e-127 459.9 317 75.1
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 6.5e-126 454.5 316 73.7
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 1.4e-125 453.4 316 73.4
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 1.4e-125 453.4 312 71.8
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 9.3e-125 450.7 357 67.5
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 2.1e-124 449.5 322 70.2
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 2.7e-124 449.1 313 72.5
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 4.6e-124 448.4 328 70.1
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 7.9e-124 447.6 333 69.1
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 1.3e-123 446.8 333 67.6
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 1.8e-123 446.4 313 72.2
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 1.8e-123 446.4 319 69.9
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 6.7e-123 444.5 313 72.2
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 4.3e-122 441.8 318 70.8
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 1.6e-121 439.9 316 70.9
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 3.7e-121 438.7 340 67.9
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 1.4e-120 436.8 346 64.7
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 1.4e-120 436.8 312 71.5
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 9.0e-120 434.1 315 70.2
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 1.5e-119 433.3 318 68.6
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 1.5e-119 433.3 322 68.3
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 2.0e-119 433.0 315 69.8
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 2.0e-119 433.0 322 69.3
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 3.4e-119 432.2 336 67.3
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 4.5e-119 431.8 315 69.8
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 5.9e-119 431.4 314 71.3
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 7.7e-119 431.0 313 69.0
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 1.0e-118 430.6 341 68.0
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 1.7e-118 429.9 329 66.9
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 3.8e-118 428.7 314 67.5
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 8.5e-118 427.6 310 70.3
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 1.1e-117 427.2 326 67.5
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 1.1e-117 427.2 326 67.5
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 1.4e-117 426.8 316 66.8
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 2.5e-117 426.0 316 69.6
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 3.2e-117 425.6 329 66.6
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 1.2e-116 423.7 314 67.5
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 1.6e-116 423.3 314 70.7
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 2.1e-116 422.9 324 67.3
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 2.7e-116 422.5 324 65.1
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 3.6e-116 422.2 339 64.0
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 4.6e-116 421.8 330 66.1
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 4.6e-116 421.8 314 69.1
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 4.6e-116 421.8 315 70.2
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 4.6e-116 421.8 328 65.5
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 1.0e-115 420.6 314 67.2
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 1.8e-115 419.9 290 74.8
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 2.3e-115 419.5 314 66.6
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 8.8e-115 417.5 297 72.1
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 2.6e-114 416.0 343 65.9
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 3.3e-114 415.6 309 68.6
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 2.8e-113 412.5 331 64.4
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 3.7e-113 412.1 321 65.7
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 3.7e-113 412.1 321 65.7
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 3.7e-113 412.1 321 65.7
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 3.7e-113 412.1 357 60.5
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 8.2e-113 411.0 331 65.0
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 2.4e-112 409.5 329 64.7
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 4.1e-112 408.7 322 65.8
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 5.3e-112 408.3 318 66.0
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 6.9e-112 407.9 332 63.6
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 9.1e-112 407.5 271 71.6
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 1.2e-111 407.1 336 61.6
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 1.5e-111 406.8 333 65.5
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 2.0e-111 406.4 337 61.1
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 3.4e-111 405.6 336 61.3
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 4.5e-111 405.2 317 66.2
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 4.5e-111 405.2 317 66.2
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 4.5e-111 405.2 317 66.2
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 4.5e-111 405.2 302 68.5
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 4.5e-111 405.2 311 63.7
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 1.7e-110 403.3 323 65.3
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 1.7e-110 403.3 279 69.9
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 2.2e-110 402.9 288 70.5
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 1.6e-108 396.7 295 70.8
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 2.1e-108 396.4 311 66.9
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 2.3e-107 392.9 299 65.9
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 3.0e-107 392.5 293 68.6
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 1.3e-105 387.1 314 64.0
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 2.2e-105 386.3 303 67.3
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 4.8e-105 385.2 313 65.2
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 1.4e-104 383.6 294 68.7
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 2.4e-104 382.9 248 70.6
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 9.1e-104 380.9 279 68.1
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 2.2e-102 376.3 321 60.4
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 2.2e-102 376.3 346 58.1
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 8.5e-102 374.4 337 58.5
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 2.5e-101 372.9 275 62.9
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 1.2e-98 364.0 316 61.7
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 5.7e-98 361.7 275 62.9
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 9.7e-98 360.9 366 54.4
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 4.8e-97 358.6 221 77.4
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 8.2e-97 357.8 275 61.5
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 3.5e-95 352.4 254 64.6
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 5.9e-95 351.7 273 62.6
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 1.7e-94 350.1 208 78.4
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 1.7e-94 350.1 275 58.5
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 3.8e-94 349.0 211 78.2
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 8.5e-94 347.8 266 65.8
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 2.7e-92 342.8 290 64.5
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 3.4e-90 335.9 287 62.0
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 8.5e-86 321.2 285 55.4
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 9.5e-85 317.8 313 56.9
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 3.5e-79 299.3 248 56.0
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 7.8e-79 298.1 319 48.9
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 7.3e-77 291.6 248 55.6
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 1.8e-75 287.0 227 58.1
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 2.3e-70 270.0 224 65.6
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 8.6e-70 268.1 225 63.6
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 2.1e-68 263.5 299 46.5
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 5.8e-66 255.4 211 65.9
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 2.9e-65 253.1 216 56.5
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 8.6e-62 241.5 166 70.5
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 4.1e-56 222.6 233 52.8
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 6.6e-54 215.3 297 42.1
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 6.6e-54 215.3 184 55.4
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 4.6e-47 192.6 177 57.1
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 2.0e-42 177.2 119 72.3
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 3.4e-42 176.4 135 65.9
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 3.8e-41 172.9 240 41.2
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.4e-40 170.2 224 42.0
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.3e-38 164.5 198 44.9
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 2.3e-38 163.7 100 76.0
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.3e-38 163.7 224 41.5
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 1.1e-37 161.4 85 87.1
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 3.6e-36 156.4 98 79.6
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 8.4e-33 145.2 198 41.9
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.4e-32 144.4 175 44.0
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 3.0e-30 136.7 77 81.8
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 3.9e-30 136.3 98 69.4
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.3e-28 131.3 218 34.9
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 1.2e-26 124.8 84 69.0
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.0e-26 124.0 224 33.9
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 5.8e-26 122.5 165 46.1
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 9.9e-26 121.7 179 36.9
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 9.9e-26 121.7 179 36.9
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.9e-25 119.4 224 31.2
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 3.2e-24 116.7 184 39.7
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.8e-19 100.9 198 31.8
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 2.7e-15 87.0 180 31.1
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 3.0e-14 83.6 224 27.2
Medtr3g063510 Medicago truncatula HOM05D004663 ORTHO05D006325 8.5e-09 65.5 56 50.0
Medtr4g074270 Medicago truncatula HOM05D004663 ORTHO05D006325 1.4e-08 64.7 68 48.5
Pp3c4_24930 Physcomitrium patens HOM05D004663 ORTHO05D006325 7.2e-08 62.4 103 35.9
AUR62002800 Chenopodium quinoa HOM05D004663 ORTHO05D006325 1.2e-07 61.6 32 81.2
Pp3c4_1950 Physcomitrium patens HOM05D004663 ORTHO05D318537 4.6e-07 59.7 61 50.8
AT2G10550 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 6.7e-06 55.8 94 40.4


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