Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G002600 Populus trichocarpa HOM05D004199 ORTHO05D005905 0.0e+00 1492.2 972 100.0
Sabra08G0000600 Salix brachista HOM05D004199 ORTHO05D005905 0.0e+00 1341.6 1010 87.7
Manes.04G160500 Manihot esculenta HOM05D004199 ORTHO05D005905 0.0e+00 1094.3 892 70.0
Atru.chr6.1864_Atru.chr6.1865 Acer truncatum HOM05D004199 ORTHO05D005905 9.3e-280 967.2 880 66.1
TWI53G1601 Tripterygium wilfordii HOM05D004199 ORTHO05D005905 9.3e-280 967.2 865 63.1
Cfa018630 Carpinus fangiana HOM05D004199 ORTHO05D005905 7.8e-279 964.1 892 63.2
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 6.6e-278 961.1 894 60.0
CiPaw.16G003100 Carya illinoinensis HOM05D004199 ORTHO05D005905 5.6e-277 958.0 896 62.4
CSS0043668 Camellia sinensis var. sinensis HOM05D004199 ORTHO05D005905 1.6e-276 956.4 886 61.4
Gohir.D10G059300 Gossypium hirsutum HOM05D004199 ORTHO05D005905 3.6e-276 955.3 903 61.9
Gohir.A10G057500 Gossypium hirsutum HOM05D004199 ORTHO05D005905 4.8e-276 954.9 902 62.0
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 4.0e-275 951.8 893 61.6
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 9.0e-275 950.7 893 59.6
Gorai.011G063300 Gossypium raimondii HOM05D004199 ORTHO05D005905 9.0e-275 950.7 905 61.8
COL.COLO4_31201 Corchorus olitorius HOM05D004199 ORTHO05D005905 4.4e-274 948.3 902 61.3
TAR623G0314 Trochodendron aralioides HOM05D004199 ORTHO05D005905 7.6e-274 947.6 894 60.1
Eucgr.G02350 Eucalyptus grandis HOM05D004199 ORTHO05D005905 4.9e-273 944.9 909 59.7
ClCG05G023030 Citrullus lanatus HOM05D004199 ORTHO05D005905 2.5e-269 932.6 870 59.9
CANSAT56G2350 Cannabis sativa HOM05D004199 ORTHO05D005905 4.0e-267 925.2 904 59.4
Eucgr.K00868 Eucalyptus grandis HOM05D004199 ORTHO05D005905 6.9e-267 924.5 909 58.2
Thecc.10G125100 Theobroma cacao HOM05D004199 ORTHO05D005905 6.9e-267 924.5 910 61.0
Nn6g35106 Nelumbo nucifera HOM05D004199 ORTHO05D005905 2.9e-265 919.1 902 60.4
MD13G1046700 Malus domestica HOM05D004199 ORTHO05D005905 4.9e-265 918.3 897 59.5
Hma1.2p1_0399F.1_g144220 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 6.4e-265 917.9 888 60.0
Lj6A766T32 Lonicera japonica HOM05D004199 ORTHO05D005905 5.4e-264 914.8 889 61.2
FvH4_4g28100 Fragaria vesca HOM05D004199 ORTHO05D005905 7.1e-264 914.4 895 59.0
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 1.3e-262 910.2 903 58.7
FAN12G0509 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.8e-262 909.8 895 58.9
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 3.0e-262 909.1 897 60.3
MBI01_g12859_MAGBIO Magnolia biondii HOM05D004199 ORTHO05D005905 1.5e-261 906.7 889 58.5
Dinv05796 Davidia involucrata HOM05D004199 ORTHO05D005905 1.3e-260 903.7 890 59.4
FAN17G3109 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.4e-259 900.2 895 58.3
Haze_17439 Corylus avellana HOM05D004199 ORTHO05D005905 1.8e-259 899.8 900 60.2
FAN07G1167 Fragaria x ananassa HOM05D004199 ORTHO05D005905 2.4e-259 899.4 895 59.3
FAN22G1977 Fragaria x ananassa HOM05D004199 ORTHO05D005905 4.0e-259 898.7 895 57.2
vmacro14411 Vaccinium macrocarpon HOM05D004199 ORTHO05D005905 6.9e-259 897.9 883 58.6
Ciclev10014191m.g Citrus clementina HOM05D004199 ORTHO05D005905 3.4e-258 895.6 892 58.0
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 1.9e-256 889.8 898 56.5
Hma1.2p1_2265F.1_g318400 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 9.3e-256 887.5 894 58.3
Ah.04g153070 Amaranthus hybridus HOM05D004199 ORTHO05D005905 5.3e-251 871.7 897 56.0
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 3.8e-249 865.5 899 56.2
DCAR_030084 Daucus carota HOM05D004199 ORTHO05D005905 3.9e-246 855.5 885 57.3
Rhsim03G0238800 Rhododendron simsii HOM05D004199 ORTHO05D005905 3.3e-245 852.4 980 52.3
Cc11_g10620 Coffea canephora HOM05D004199 ORTHO05D005905 1.6e-244 850.1 910 56.2
THA.LOC104800384 Tarenaya hassleriana HOM05D004199 ORTHO05D005905 9.0e-243 844.3 905 55.9
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 1.5e-242 843.6 912 56.6
Aqoxy2G01512 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 4.5e-242 842.0 869 56.6
PSO339G4136 Papaver somniferum HOM05D004199 ORTHO05D005905 8.5e-241 837.8 891 54.5
Aa31LG3G17980 Aethionema arabicum HOM05D004199 ORTHO05D005905 2.5e-240 836.3 910 53.3
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 2.5e-240 836.3 907 55.0
Duzib235G0865 Durio zibethinus HOM05D004199 ORTHO05D005905 7.2e-240 834.7 905 56.1
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 1.2e-239 833.9 907 55.5
EL10Ac8g19592 Beta vulgaris HOM05D004199 ORTHO05D005905 7.9e-239 831.2 898 54.7
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 3.9e-238 828.9 887 54.1
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 1.5e-237 827.0 903 55.6
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 1.3e-236 823.9 889 55.7
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 2.2e-236 823.2 852 57.9
Lalb_Chr10g0099721 Lupinus albus HOM05D004199 ORTHO05D005905 3.7e-236 822.4 893 55.2
Prupe.1G305200 Prunus persica HOM05D004199 ORTHO05D005905 4.8e-236 822.0 893 55.8
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 8.2e-236 821.2 890 54.5
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 4.1e-235 818.9 896 53.1
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 4.1e-235 818.9 895 55.4
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 5.3e-235 818.5 895 56.0
Peaxi162Scf00102g00927 Petunia axillaris HOM05D004199 ORTHO05D005905 6.9e-235 818.1 904 54.0
SGA_v2.0_scaffold14G06820 Striga asiatica HOM05D004199 ORTHO05D005905 6.9e-235 818.1 903 52.9
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 2.6e-234 816.2 899 55.5
Sopen05g005660 Solanum pennellii HOM05D004199 ORTHO05D005905 1.9e-232 810.1 910 54.2
PGSC0003DMG400000826 Solanum tuberosum HOM05D004199 ORTHO05D005905 2.5e-232 809.7 908 54.1
Medtr5g007520 Medicago truncatula HOM05D004199 ORTHO05D005905 4.2e-232 808.9 883 54.8
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 1.8e-230 803.5 890 53.7
Hma1.2p1_0592F.1_g185323 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 1.3e-228 797.3 828 57.9
Lsat_1_v5_gn_4_1641 Lactuca sativa HOM05D004199 ORTHO05D005905 2.8e-228 796.2 890 53.6
Nitab4.5_0004122g0060 Nicotiana tabacum HOM05D004199 ORTHO05D005905 3.7e-228 795.8 970 50.0
arahy.Tifrunner.gnm1.ann1.9AQU5H Arachis hypogaea HOM05D004199 ORTHO05D005905 3.1e-227 792.7 914 54.4
arahy.Tifrunner.gnm1.ann1.P5TZTU Arachis hypogaea HOM05D004199 ORTHO05D005905 2.1e-223 780.0 936 53.1
TPR.G37944 Trifolium pratense HOM05D004199 ORTHO05D005905 1.5e-221 773.9 794 57.2
HanXRQChr17g0568011 Helianthus annuus HOM05D004199 ORTHO05D005905 1.6e-218 763.8 833 53.7
Lalb_Chr04g0254951 Lupinus albus HOM05D004199 ORTHO05D005905 2.0e-218 763.5 893 53.4
BcaB08g37246 Brassica carinata HOM05D004199 ORTHO05D005905 4.2e-216 755.7 876 50.6
Nitab4.5_0011513g0020 Nicotiana tabacum HOM05D004199 ORTHO05D005905 5.5e-216 755.4 944 49.4
A03p03960 Brassica napus HOM05D004199 ORTHO05D005905 7.2e-216 755.0 887 49.9
BcaB01g05585 Brassica carinata HOM05D004199 ORTHO05D005905 1.0e-214 751.1 893 51.3
CDE05G0525 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 1.8e-214 750.4 891 51.4
CARHR204430 Cardamine hirsuta HOM05D004199 ORTHO05D005905 6.8e-214 748.4 896 49.7
SEGI_39962 Sequoiadendron giganteum HOM05D004199 ORTHO05D005905 2.6e-213 746.5 877 51.1
Thhalv10012615m.g Eutrema salsugineum HOM05D004199 ORTHO05D005905 5.7e-213 745.3 900 51.3
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 9.8e-213 744.6 892 52.0
Migut.E00297 Erythranthe guttata HOM05D004199 ORTHO05D005905 3.7e-212 742.7 886 50.2
BraA03t09739Z Brassica rapa HOM05D004199 ORTHO05D005905 3.1e-211 739.6 892 49.7
A10p28170 Brassica napus HOM05D004199 ORTHO05D005905 7.0e-211 738.4 880 49.2
BraA10t44866Z Brassica rapa HOM05D004199 ORTHO05D005905 7.0e-211 738.4 880 49.2
C09p68380 Brassica napus HOM05D004199 ORTHO05D005905 2.5e-208 729.9 898 48.6
BolC9t59585H Brassica oleracea HOM05D004199 ORTHO05D005905 3.2e-208 729.6 898 49.0
CDE01G0057 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 2.7e-207 726.5 846 52.0
unitig_22.g6876 Utricularia gibba HOM05D004199 ORTHO05D005905 3.7e-204 716.1 913 48.2
Aqoxy6G00799 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 3.8e-201 706.1 893 48.6
AL6G19260 Arabidopsis lyrata HOM05D004199 ORTHO05D005905 1.9e-200 703.7 898 49.7
Carub.0006s0751 Capsella rubella HOM05D004199 ORTHO05D005905 2.8e-199 699.9 905 48.6
AT5G08550 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 2.6e-197 693.3 897 47.8
Solyc05g009850.4 Solanum lycopersicum HOM05D004199 ORTHO05D005905 4.4e-197 692.6 615 61.5
C03p04430 Brassica napus HOM05D004199 ORTHO05D005905 7.5e-197 691.8 891 47.3
Actinidia38395 Actinidia chinensis HOM05D004199 ORTHO05D005905 1.1e-195 688.0 643 61.4
Sp6g34340 Schrenkiella parvula HOM05D004199 ORTHO05D005905 3.5e-194 682.9 908 47.4
BolC3t12974H Brassica oleracea HOM05D004199 ORTHO05D005905 1.0e-193 681.4 891 46.7
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 6.0e-186 655.6 923 44.1
GSVIVG01011956001 Vitis vinifera HOM05D004199 ORTHO05D005905 1.5e-184 651.0 488 69.1
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 6.6e-177 625.5 902 45.0
AagrBONN_evm.TU.Sc2ySwM_228.4147 Anthoceros agrestis HOM05D004199 ORTHO05D005905 4.7e-175 619.4 896 43.4
AUR62042759 Chenopodium quinoa HOM05D004199 ORTHO05D005905 4.0e-166 589.7 485 63.7
AagrBONN_evm.TU.Sc2ySwM_368.435 Anthoceros agrestis HOM05D004199 ORTHO05D005905 9.9e-165 585.1 894 41.5
Oeu041359.1 Olea europaea HOM05D004199 ORTHO05D005905 2.1e-159 567.4 480 62.9
Mapoly0131s0026 Marchantia polymorpha HOM05D004199 ORTHO05D005905 6.2e-159 565.8 899 41.2
Pp3c5_20240 Physcomitrium patens HOM05D004199 ORTHO05D005905 4.0e-158 563.1 896 41.3
SMO259G0010 Selaginella moellendorffii HOM05D004199 ORTHO05D005905 1.2e-138 498.4 889 39.1
Rhsim01G0212500 Rhododendron simsii HOM05D004199 ORTHO05D005905 1.9e-131 474.6 532 53.9
CBR_g46838 Chara braunii HOM05D004199 ORTHO05D005905 1.5e-112 411.8 643 40.0
Nitab4.5_0007631g0010 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.0e-100 372.5 485 47.6
AT5G09210 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 2.3e-89 334.7 323 56.7
Zm00001eb177730 Zea mays HOM05D004199 ORTHO05D005905 7.5e-88 329.7 402 47.0
Glyma.18G205900 Glycine max HOM05D004199 ORTHO05D005905 2.8e-87 327.8 298 60.1
Zm00001eb381810 Zea mays HOM05D004199 ORTHO05D005905 7.7e-85 319.7 408 46.6
QL01p046262 Quercus lobata HOM05D004199 ORTHO05D005905 5.7e-80 303.5 412 49.3
CARHR203800 Cardamine hirsuta HOM05D004199 ORTHO05D005905 6.6e-76 290.0 262 60.7
Zm00001eb323900 Zea mays HOM05D004199 ORTHO05D005905 4.3e-75 287.3 392 45.7
Potri.006G020200 Populus trichocarpa HOM05D004199 ORTHO05D005905 2.1e-66 258.5 151 97.4
GSVIVG01011955001 Vitis vinifera HOM05D004199 ORTHO05D005905 2.1e-66 258.5 389 44.7
Potri.006G020400 Populus trichocarpa HOM05D004199 ORTHO05D005905 6.2e-66 256.9 151 97.4
Oeu041360.1 Olea europaea HOM05D004199 ORTHO05D005905 8.3e-63 246.5 424 41.3
Actinidia13676 Actinidia chinensis HOM05D004199 ORTHO05D005905 5.1e-60 237.3 171 70.8
MCO14G506 Micromonas commoda HOM05D004199 ORTHO05D005905 5.1e-60 237.3 578 31.3
Cre06.g269350 Chlamydomonas reinhardtii HOM05D004199 ORTHO05D005905 2.8e-58 231.5 611 29.3
AUR62033048 Chenopodium quinoa HOM05D004199 ORTHO05D005905 3.8e-55 221.1 406 40.6
EL10Ac6g14565 Beta vulgaris HOM05D004199 ORTHO05D005905 3.9e-52 211.1 168 61.9
Cpa.g.sc221.8 Carica papaya HOM05D004199 ORTHO05D005905 4.5e-40 171.0 358 41.3
Actinidia13675 Actinidia chinensis HOM05D004199 ORTHO05D005905 3.5e-37 161.4 389 38.0
EL10Ac6g13882 Beta vulgaris HOM05D004199 ORTHO05D005905 3.9e-28 131.3 142 52.8
Thecc.06G064500 Theobroma cacao HOM05D004199 ORTHO05D005905 6.5e-23 114.0 76 77.6
Cpa.g.sc221.6 Carica papaya HOM05D004199 ORTHO05D005905 4.2e-22 111.3 65 84.6
CARHR069330 Cardamine hirsuta HOM05D004199 ORTHO05D005905 7.1e-22 110.5 88 61.4
Sabra10G0198200 Salix brachista HOM05D004199 ORTHO05D349944 3.0e-20 105.1 142 52.8
AagrBONN_evm.TU.Sc2ySwM_368.450 Anthoceros agrestis HOM05D004199 ORTHO05D005905 1.5e-19 102.8 84 54.8
Nitab4.5_0000520g0050 Nicotiana tabacum HOM05D004199 ORTHO05D005905 2.5e-19 102.1 198 37.9
COL.COLO4_28252 Corchorus olitorius HOM05D004199 ORTHO05D025158 3.1e-17 95.1 90 64.4
COL.COLO4_32069 Corchorus olitorius HOM05D004199 ORTHO05D025158 1.0e-15 90.1 90 60.0
CARHR069340 Cardamine hirsuta HOM05D004199 ORTHO05D005905 1.6e-10 72.8 88 47.7
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 4.8e-10 71.2 112 50.9
CARHR147400 Cardamine hirsuta HOM05D004199 ORTHO05D005905 3.1e-09 68.6 129 34.9
EL10Ac2g03784 Beta vulgaris HOM05D004199 ORTHO05D019838 2.2e-07 62.4 61 55.7
EL10Ac3g06366 Beta vulgaris HOM05D004199 ORTHO05D019838 2.2e-07 62.4 61 55.7
Aqoxy5G02943 Aquilegia oxysepala HOM05D004199 ORTHO05D077991 6.5e-07 60.8 39 61.5
EL10Ac7g17540 Beta vulgaris HOM05D000966 ORTHO05D019838 1.4e-06 59.7 60 55.0
AagrBONN_evm.TU.Sc2ySwM_368.453 Anthoceros agrestis HOM05D030179 ORTHO05D026588 2.5e-06 58.9 47 51.1
TPR.G37907 Trifolium pratense HOM05D004199 ORTHO05D411047 5.5e-06 57.8 53 56.6


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