Gene: AT5G09210

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G09210
  • Transcript Identifier AT5G09210.1
  • Gene Type Coding gene
  • Location Chr5 : 2862719-2865359 : negative

Gene Family Information

  • ID HOM05D004199
  • #Genes/#Species 168/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G09210.1
  • uniprot F4KCH7

Descriptions

  • Description GC-rich sequence DNA-binding factor-like protein
  • Computational description GC-rich sequence DNA-binding factor-like protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: GC-rich sequence DNA-binding factor-like (InterPro:IPR012890); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein (TAIR:AT5G08550.1); Has 191 Blast hits to 188 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 4; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
Gene OntologymRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022783 GCF, C-terminal
IPR012890 Intron Large complex component GCFC2-like
Mapman id Description
16.2.7.3.1 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.component ILP1