Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G090666 Populus trichocarpa HOM05D001392 ORTHO05D029861 1.2e-55 219.5 109 100.0
Potri.017G124500 Populus trichocarpa HOM05D001392 ORTHO05D006407 1.7e-41 172.6 100 85.0
CSS0005968 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D006407 1.0e-30 136.7 95 75.8
Manes.02G076200 Manihot esculenta HOM05D001392 ORTHO05D006407 5.7e-29 131.0 97 71.1
Lj4A264G50 Lonicera japonica HOM05D001392 ORTHO05D006407 7.5e-29 130.6 100 71.0
Hma1.2p1_0524F.1_g172340 Hydrangea macrophylla HOM05D001392 ORTHO05D006407 1.2e-26 123.2 100 69.0
Hma1.2p1_0524F.1_g172350 Hydrangea macrophylla HOM05D001392 ORTHO05D006407 1.2e-26 123.2 100 69.0
Lsat_1_v5_gn_3_65141 Lactuca sativa HOM05D001392 ORTHO05D006407 3.8e-25 118.2 100 62.0
Nn7g38289 Nelumbo nucifera HOM05D001392 ORTHO05D006407 6.5e-25 117.5 100 64.0
Oeu023509.1 Olea europaea HOM05D001392 ORTHO05D006407 8.6e-25 117.1 100 60.0
Sc14g0006490 Simmondsia chinensis HOM05D001392 ORTHO05D006407 8.6e-25 117.1 98 65.3
Thecc.04G116700 Theobroma cacao HOM05D001392 ORTHO05D006407 8.6e-25 117.1 100 63.0
Actinidia35731 Actinidia chinensis HOM05D001392 ORTHO05D006407 1.1e-24 116.7 100 68.0
Duzib133G1570 Durio zibethinus HOM05D001392 ORTHO05D006407 1.5e-24 116.3 100 63.0
Rhsim08G0018500 Rhododendron simsii HOM05D001392 ORTHO05D006407 2.5e-24 115.5 94 69.1
GSVIVG01030776001 Vitis vinifera HOM05D001392 ORTHO05D006407 2.5e-24 115.5 100 66.0
MD09G1264400 Malus domestica HOM05D001392 ORTHO05D006407 4.2e-24 114.8 92 66.3
Gohir.A10G243050 Gossypium hirsutum HOM05D001392 ORTHO05D006407 5.5e-24 114.4 98 66.3
Gohir.D10G255000 Gossypium hirsutum HOM05D001392 ORTHO05D006407 5.5e-24 114.4 98 66.3
Gorai.011G296000 Gossypium raimondii HOM05D001392 ORTHO05D006407 5.5e-24 114.4 98 66.3
GSVIVG01027222001 Vitis vinifera HOM05D001392 ORTHO05D006407 5.5e-24 114.4 100 66.0
vmacro18535 Vaccinium macrocarpon HOM05D001392 ORTHO05D006407 1.2e-23 113.2 95 66.3
TAR623G1183 Trochodendron aralioides HOM05D001392 ORTHO05D006407 1.6e-23 112.8 101 64.4
Haze_20419 Corylus avellana HOM05D001392 ORTHO05D006407 2.8e-23 112.1 100 65.0
Psat1g089800 Pisum sativum HOM05D001392 ORTHO05D006407 4.7e-23 111.3 104 58.7
Ca_25679_v3 Cicer arietinum L. HOM05D001392 ORTHO05D006407 1.0e-22 110.2 100 61.0
RcHm_v2.0_Chr1g0328051 Rosa chinensis HOM05D001392 ORTHO05D006407 1.0e-22 110.2 97 61.9
TPR.G35631 Trifolium pratense HOM05D001392 ORTHO05D006407 1.0e-22 110.2 104 59.6
Cfa017719 Carpinus fangiana HOM05D001392 ORTHO05D006407 1.4e-22 109.8 100 64.0
Lj2g0008629 Lotus japonicus HOM05D001392 ORTHO05D006407 2.3e-22 109.0 97 61.9
PGR004G0453 Punica granatum HOM05D001392 ORTHO05D006407 6.8e-22 107.5 100 63.0
CiPaw.09G167100 Carya illinoinensis HOM05D001392 ORTHO05D006407 5.7e-21 104.4 104 59.6
Nitab4.5_0001206g0020 Nicotiana tabacum HOM05D001392 ORTHO05D006407 5.7e-21 104.4 103 57.3
MSTRG.4620 Avicennia marina HOM05D001392 ORTHO05D006407 7.5e-21 104.0 97 52.6
Migut.D01299 Erythranthe guttata HOM05D001392 ORTHO05D006407 7.5e-21 104.0 94 58.5
Ciclev10010998m.g Citrus clementina HOM05D001392 ORTHO05D006407 9.8e-21 103.6 98 62.2
Lalb_Chr14g0364821 Lupinus albus HOM05D001392 ORTHO05D006407 9.8e-21 103.6 99 56.6
HanXRQChr10g0283681 Helianthus annuus HOM05D001392 ORTHO05D006407 1.3e-20 103.2 100 58.0
ECA246G3910 Erigeron canadensis HOM05D001392 ORTHO05D006407 1.7e-20 102.8 84 64.3
CANSAT71G0007 Cannabis sativa HOM05D001392 ORTHO05D006407 2.2e-20 102.4 100 62.0
TWI74G1301 Tripterygium wilfordii HOM05D001392 ORTHO05D006407 2.8e-20 102.1 110 55.5
QL07p019084 Quercus lobata HOM05D001392 ORTHO05D006407 3.7e-20 101.7 100 54.0
Gohir.D08G275314 Gossypium hirsutum HOM05D001392 ORTHO05D029861 4.9e-20 101.3 98 58.2
Gohir.D11G349100 Gossypium hirsutum HOM05D001392 ORTHO05D029861 6.3e-20 100.9 98 58.2
Sabra17G0105100 Salix brachista HOM05D001392 ORTHO05D006407 6.3e-20 100.9 86 62.8
Aqoxy2G00612 Aquilegia oxysepala HOM05D001392 ORTHO05D006407 8.3e-20 100.5 100 55.0
ClCG05G011510 Citrullus lanatus HOM05D001392 ORTHO05D006407 8.3e-20 100.5 88 60.2
Sopen12g009300 Solanum pennellii HOM05D001392 ORTHO05D006407 8.3e-20 100.5 103 54.4
Aa31LG11G12960 Aethionema arabicum HOM05D001392 ORTHO05D006407 2.4e-19 99.0 97 55.7
arahy.Tifrunner.gnm1.ann1.XLS2Y4 Arachis hypogaea HOM05D001392 ORTHO05D006407 2.4e-19 99.0 101 56.4
MELO3C020199.2 Cucumis melo HOM05D001392 ORTHO05D006407 2.4e-19 99.0 88 59.1
Eucgr.F02848 Eucalyptus grandis HOM05D001392 ORTHO05D006407 2.4e-19 99.0 100 60.0
THA.LOC104827192 Tarenaya hassleriana HOM05D001392 ORTHO05D006407 2.4e-19 99.0 97 54.6
CAN.G207.6 Capsicum annuum HOM05D001392 ORTHO05D006407 3.1e-19 98.6 98 56.1
SalBow5G1075 Salvia bowleyana HOM05D001392 ORTHO05D006407 3.1e-19 98.6 95 54.7
Thhalv10012577m.g Eutrema salsugineum HOM05D001392 ORTHO05D006407 7.0e-19 97.4 97 55.7
CsaV3_3G020830 Cucumis sativus L. HOM05D001392 ORTHO05D006407 9.2e-19 97.1 88 59.1
FvH4_7g04130 Fragaria vesca HOM05D001392 ORTHO05D006407 9.2e-19 97.1 100 54.0
Solyc12g019100.2 Solanum lycopersicum HOM05D001392 ORTHO05D006407 9.2e-19 97.1 105 53.3
EL10Ac2g03165 Beta vulgaris HOM05D001392 ORTHO05D006407 1.2e-18 96.7 99 55.6
Medtr6g027620 Medicago truncatula HOM05D001392 ORTHO05D006407 1.6e-18 96.3 106 52.8
AT5G16715 Arabidopsis thaliana HOM05D001392 ORTHO05D006407 3.5e-18 95.1 92 54.3
AUR62018211 Chenopodium quinoa HOM05D001392 ORTHO05D006407 4.5e-18 94.7 101 50.5
AUR62038698 Chenopodium quinoa HOM05D001392 ORTHO05D006407 4.5e-18 94.7 102 52.0
Sp6g27440 Schrenkiella parvula HOM05D001392 ORTHO05D006407 5.9e-18 94.4 96 54.2
Glyma.17G187000 Glycine max HOM05D001392 ORTHO05D006407 7.8e-18 94.0 102 52.9
Hma1.2p1_1840F.1_g304930 Hydrangea macrophylla HOM05D001392 ORTHO05D006407 7.8e-18 94.0 51 82.4
Sed0009589 Sechium edule HOM05D001392 ORTHO05D006407 7.8e-18 94.0 95 54.7
arahy.Tifrunner.gnm1.ann1.0T11RW Arachis hypogaea HOM05D001392 ORTHO05D006407 1.0e-17 93.6 106 52.8
Hund13115 Selenicereus undatus HOM05D001392 ORTHO05D006407 1.0e-17 93.6 98 56.1
Os07g0163500 Oryza sativa ssp. japonica HOM05D001392 ORTHO05D006407 1.3e-17 93.2 90 55.6
MD17G1260100 Malus domestica HOM05D001392 ORTHO05D006407 3.8e-17 91.7 53 75.5
AL6G27720 Arabidopsis lyrata HOM05D001392 ORTHO05D006407 6.6e-17 90.9 96 52.1
Phvul.004G073700 Phaseolus vulgaris HOM05D001392 ORTHO05D006407 6.6e-17 90.9 99 55.6
Carub.0006s1493 Capsella rubella HOM05D001392 ORTHO05D006407 8.6e-17 90.5 96 52.1
A10p22510 Brassica napus HOM05D001392 ORTHO05D006407 1.1e-16 90.1 92 54.3
BraA10t44310Z Brassica rapa HOM05D001392 ORTHO05D006407 1.1e-16 90.1 92 54.3
FAN03G0802 Fragaria x ananassa HOM05D001392 ORTHO05D006407 1.5e-16 89.7 114 48.2
BolC9t58869H Brassica oleracea HOM05D001392 ORTHO05D006407 1.9e-16 89.4 97 50.5
C09p60360 Brassica napus HOM05D001392 ORTHO05D006407 2.5e-16 89.0 97 51.5
Atru.chr1.1875 Acer truncatum HOM05D001392 ORTHO05D006407 4.3e-16 88.2 99 56.6
MBI11_g24566_MAGBIO Magnolia biondii HOM05D001392 ORTHO05D006407 4.3e-16 88.2 107 51.4
VMungo0464G1730 Vigna mungo HOM05D001392 ORTHO05D006407 9.5e-16 87.0 63 61.9
Prupe.3G162000 Prunus persica HOM05D001392 ORTHO05D006407 2.1e-15 85.9 49 75.5
Zm00001eb117220 Zea mays HOM05D001392 ORTHO05D006407 1.4e-14 83.2 102 52.0
CDE10G1341 Ceratophyllum demersum HOM05D001392 ORTHO05D006407 2.3e-14 82.4 99 51.5
DCAR_003434 Daucus carota HOM05D001392 ORTHO05D006407 2.3e-14 82.4 54 66.7
Ah.12g060150 Amaranthus hybridus HOM05D001392 ORTHO05D006407 3.0e-14 82.0 98 51.0
COL.COLO4_09039 Corchorus olitorius HOM05D001392 ORTHO05D006407 5.8e-13 77.8 78 60.3
unitig_749.g13792 Utricularia gibba HOM05D001392 ORTHO05D006407 1.7e-12 76.3 94 45.7
ATR0697G119 Amborella trichopoda HOM05D001392 ORTHO05D006407 7.8e-10 67.4 48 62.5
Dinv19030 Davidia involucrata HOM05D001392 ORTHO05D006407 7.8e-10 67.4 38 73.7
PSO339G4038 Papaver somniferum HOM05D001392 ORTHO05D006407 1.5e-08 63.2 42 64.3
PSO384G0294 Papaver somniferum HOM05D001392 ORTHO05D006407 1.5e-08 63.2 42 64.3
SEGI_08428 Sequoiadendron giganteum HOM05D001392 ORTHO05D029861 1.5e-08 63.2 45 57.8
Pp3c12_13790 Physcomitrium patens HOM05D001392 ORTHO05D006407 4.0e-06 55.1 52 48.1
Mapoly0040s0139 Marchantia polymorpha HOM05D001392 ORTHO05D006407 6.8e-06 54.3 48 47.9


User provided reference genes

Program Settings