Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 0.0e+00 1182.2 609 100.0
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 0.0e+00 1092.8 609 92.1
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 5.0e-300 1033.9 610 85.4
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 9.8e-296 1019.6 609 84.9
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 6.4e-295 1016.9 609 83.7
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 4.6e-293 1010.7 780 70.6
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 1.6e-290 1002.3 609 84.4
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 4.4e-288 994.2 610 81.3
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 5.8e-288 993.8 610 82.1
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 5.8e-288 993.8 609 81.9
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 5.8e-288 993.8 609 81.9
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 4.1e-286 987.6 610 80.7
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 2.7e-285 984.9 586 83.3
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 1.0e-284 983.0 625 80.2
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 2.5e-283 978.4 614 79.5
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 3.4e-280 968.0 610 80.2
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 4.4e-280 967.6 610 80.2
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 6.4e-279 963.8 609 79.8
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 8.7e-276 953.4 607 78.3
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 1.1e-275 953.0 609 77.8
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 1.9e-275 952.2 617 77.5
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 3.3e-275 951.4 588 80.1
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 1.8e-273 945.7 610 77.9
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 2.4e-273 945.3 588 79.6
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 1.2e-272 943.0 610 77.0
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 4.4e-272 941.0 594 79.1
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 9.9e-272 939.9 610 77.0
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 1.3e-271 939.5 611 77.6
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 2.2e-271 938.7 610 76.7
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 1.1e-270 936.4 608 76.5
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 3.2e-270 934.9 606 76.6
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 1.2e-269 932.9 606 76.4
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 1.2e-269 932.9 612 77.6
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 1.2e-269 932.9 612 77.5
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 4.6e-269 931.0 613 76.5
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 2.3e-268 928.7 610 77.2
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 1.5e-267 926.0 607 78.4
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 3.3e-267 924.9 609 76.5
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 3.3e-267 924.9 585 78.3
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 5.6e-267 924.1 588 79.9
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 1.6e-266 922.5 650 73.2
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 2.1e-266 922.2 611 76.4
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 6.9e-265 917.1 589 77.6
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 9.0e-265 916.8 585 79.1
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 2.0e-264 915.6 587 77.5
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 1.7e-263 912.5 587 77.2
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 2.2e-263 912.1 604 75.0
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 3.8e-263 911.4 612 76.5
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 1.4e-262 909.4 589 77.4
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 7.9e-261 903.7 585 76.6
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 4.3e-259 897.9 587 77.0
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 2.1e-258 895.6 589 76.7
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 3.7e-258 894.8 584 75.7
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 1.1e-257 893.3 530 82.6
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 2.9e-255 885.2 615 74.3
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 3.8e-255 884.8 588 77.0
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 2.5e-254 882.1 588 75.5
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 2.5e-254 882.1 550 79.6
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 2.7e-253 878.6 592 75.7
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 7.9e-253 877.1 592 75.7
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 7.9e-253 877.1 590 75.3
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 1.0e-252 876.7 596 75.2
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 5.1e-252 874.4 592 74.8
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 1.1e-251 873.2 588 75.7
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 1.1e-251 873.2 575 75.8
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 3.7e-250 868.2 614 73.1
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 1.1e-249 866.7 532 79.9
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 1.4e-249 866.3 613 72.9
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 2.4e-249 865.5 698 66.0
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 3.4e-248 861.7 587 74.8
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 5.8e-248 860.9 618 72.3
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 5.0e-247 857.8 586 75.3
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 5.0e-247 857.8 590 74.2
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 8.4e-247 857.1 582 74.6
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 8.4e-247 857.1 538 78.6
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 5.1e-244 847.8 584 73.8
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 5.7e-243 844.3 599 72.6
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 7.4e-243 844.0 587 72.7
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 9.7e-243 843.6 587 72.9
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 6.3e-234 814.3 509 78.8
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 1.2e-229 800.0 494 79.1
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 6.7e-228 794.3 612 67.5
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 4.8e-226 788.1 586 67.9
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 3.1e-225 785.4 581 69.4
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 5.0e-223 778.1 519 75.5
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 1.5e-222 776.5 606 67.7
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 9.4e-222 773.9 587 68.0
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.4e-220 770.0 740 57.6
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 3.3e-219 765.4 444 84.0
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 1.5e-214 750.0 567 69.1
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 7.2e-214 747.7 640 63.9
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 4.4e-203 711.8 619 62.4
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 2.3e-199 699.5 581 61.6
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 5.0e-199 698.4 521 65.3
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 1.2e-195 687.2 444 76.8
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 9.8e-195 684.1 562 61.9
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 2.5e-190 669.5 559 61.4
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 4.3e-190 668.7 541 63.2
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 4.0e-180 635.6 451 72.7
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 4.3e-166 589.0 383 75.5
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 3.6e-149 532.7 344 75.0
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 3.7e-133 479.6 270 83.7
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 1.6e-128 464.2 323 72.1
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 5.7e-126 455.7 287 81.2
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 7.7e-123 445.3 309 72.8
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 4.6e-120 436.0 566 43.8
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 2.9e-106 390.2 383 59.3
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 5.7e-102 375.9 252 73.8
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 4.0e-95 353.2 257 70.4
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 2.3e-90 337.4 267 64.0
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 1.8e-84 317.8 188 83.0
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 4.4e-78 296.6 206 75.2
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 2.3e-74 284.3 181 75.1
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 6.0e-67 259.6 444 35.6
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 2.1e-56 224.6 376 39.9
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 4.4e-54 216.9 108 87.0
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 9.2e-52 209.1 171 62.0
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 4.6e-51 206.8 131 77.9
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 6.2e-48 196.4 133 74.4
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 4.4e-46 190.3 137 71.5
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 7.3e-41 172.9 189 53.4
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 1.3e-37 162.2 109 66.1
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 4.2e-36 157.1 175 54.3
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 9.0e-23 112.8 66 72.7
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 4.5e-22 110.5 266 28.9
QL04p021235 Quercus lobata HOM05D006110 ORTHO05D011410 1.4e-07 62.4 55 65.5
TAR625G1023 Trochodendron aralioides HOM05D006110 ORTHO05D007774 5.3e-07 60.5 58 62.1


User provided reference genes

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