Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G148501 Populus trichocarpa HOM05D003241 ORTHO05D003812 8.9e-83 310.5 184 100.0
Potri.001G082100 Populus trichocarpa HOM05D003241 ORTHO05D003812 9.4e-24 114.4 98 67.3
Glyma.15G216300 Glycine max HOM05D003241 ORTHO05D003812 4.8e-20 102.1 173 43.4
Cpa.g.sc115.47 Carica papaya HOM05D003241 ORTHO05D003812 2.0e-18 96.7 95 58.9
CiPaw.02G097400 Carya illinoinensis HOM05D003241 ORTHO05D003812 3.4e-18 95.9 99 56.6
Duzib268G1256 Durio zibethinus HOM05D003241 ORTHO05D003812 1.0e-17 94.4 97 57.7
Atru.chr4.2711 Acer truncatum HOM05D003241 ORTHO05D003812 2.2e-17 93.2 99 58.6
COL.COLO4_17461 Corchorus olitorius HOM05D003241 ORTHO05D003812 2.9e-17 92.8 95 58.9
Manes.16G074400 Manihot esculenta HOM05D003241 ORTHO05D003812 2.9e-17 92.8 99 58.6
Thecc.07G135300 Theobroma cacao HOM05D003241 ORTHO05D003812 2.9e-17 92.8 97 57.7
Duzib213G0093 Durio zibethinus HOM05D003241 ORTHO05D003812 5.0e-17 92.0 97 57.7
MELO3C022204.2 Cucumis melo HOM05D003241 ORTHO05D003812 4.2e-16 89.0 98 56.1
Lalb_Chr19g0130441 Lupinus albus HOM05D003241 ORTHO05D003812 4.2e-16 89.0 99 53.5
QL06p002249 Quercus lobata HOM05D003241 ORTHO05D003812 5.5e-16 88.6 99 57.6
QL06p002393 Quercus lobata HOM05D003241 ORTHO05D003812 5.5e-16 88.6 99 57.6
CSS0028609 Camellia sinensis var. sinensis HOM05D003241 ORTHO05D003812 7.2e-16 88.2 98 54.1
Actinidia29972 Actinidia chinensis HOM05D003241 ORTHO05D003812 9.4e-16 87.8 99 53.5
Gohir.A04G045600 Gossypium hirsutum HOM05D003241 ORTHO05D003812 9.4e-16 87.8 97 52.6
Lalb_Chr03g0032261 Lupinus albus HOM05D003241 ORTHO05D003812 9.4e-16 87.8 99 52.5
vmacro13976 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 9.4e-16 87.8 99 54.5
Cfa015650 Carpinus fangiana HOM05D003241 ORTHO05D003812 2.7e-15 86.3 98 54.1
Haze_00894 Corylus avellana HOM05D003241 ORTHO05D003812 2.7e-15 86.3 98 54.1
Glyma.08G229600 Glycine max HOM05D003241 ORTHO05D003812 4.7e-15 85.5 99 55.6
TWI32G0731 Tripterygium wilfordii HOM05D003241 ORTHO05D003812 6.1e-15 85.1 98 55.1
MD13G1193700 Malus domestica HOM05D003241 ORTHO05D003812 1.0e-14 84.3 99 53.5
Rhsim01G0112900 Rhododendron simsii HOM05D003241 ORTHO05D003812 1.0e-14 84.3 99 52.5
ClCG08G000520 Citrullus lanatus HOM05D003241 ORTHO05D003812 1.8e-14 83.6 98 54.1
QL11p041824 Quercus lobata HOM05D003241 ORTHO05D003812 2.3e-14 83.2 99 54.5
GSVIVG01035173001 Vitis vinifera HOM05D003241 ORTHO05D003812 2.3e-14 83.2 99 52.5
CsaV3_5G040300 Cucumis sativus L. HOM05D003241 ORTHO05D003812 3.0e-14 82.8 98 52.0
arahy.Tifrunner.gnm1.ann1.2W1DSR Arachis hypogaea HOM05D003241 ORTHO05D003812 3.9e-14 82.4 98 52.0
Medtr1g083910 Medicago truncatula HOM05D003241 ORTHO05D003812 3.9e-14 82.4 99 51.5
Ca_13374_v3 Cicer arietinum L. HOM05D003241 ORTHO05D003812 1.1e-13 80.9 99 50.5
Dinv09319 Davidia involucrata HOM05D003241 ORTHO05D003812 1.5e-13 80.5 98 53.1
Glyma.07G220800 Glycine max HOM05D003241 ORTHO05D003812 1.5e-13 80.5 97 54.6
Gorai.009G361400 Gossypium raimondii HOM05D003241 ORTHO05D003812 2.6e-13 79.7 97 51.5
Lj3g0022607 Lotus japonicus HOM05D003241 ORTHO05D003812 2.6e-13 79.7 87 56.3
Sed0020388 Sechium edule HOM05D003241 ORTHO05D003812 2.6e-13 79.7 92 56.5
Gohir.D05G337200 Gossypium hirsutum HOM05D003241 ORTHO05D003812 3.3e-13 79.3 97 51.5
Prupe.1G014100 Prunus persica HOM05D003241 ORTHO05D003812 4.4e-13 79.0 98 53.1
Ciclev10000233m.g Citrus clementina HOM05D003241 ORTHO05D003812 5.7e-13 78.6 98 54.1
QL09p049197 Quercus lobata HOM05D003241 ORTHO05D003812 5.7e-13 78.6 61 67.2
Eucgr.G01007 Eucalyptus grandis HOM05D003241 ORTHO05D003812 7.4e-13 78.2 99 51.5
Psat0s3089g0040 Pisum sativum HOM05D003241 ORTHO05D003812 7.4e-13 78.2 99 50.5
TPR.G2613 Trifolium pratense HOM05D003241 ORTHO05D003812 7.4e-13 78.2 100 51.0
MD16G1194300 Malus domestica HOM05D003241 ORTHO05D003812 9.7e-13 77.8 99 48.5
PGR031G3475 Punica granatum HOM05D003241 ORTHO05D003812 1.3e-12 77.4 98 51.0
Eucgr.J03092 Eucalyptus grandis HOM05D003241 ORTHO05D003812 3.7e-12 75.9 99 49.5
CDE06G2045 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 6.3e-12 75.1 98 49.0
Nn5g27739 Nelumbo nucifera HOM05D003241 ORTHO05D003812 8.2e-12 74.7 99 49.5
Sc22g0003580 Simmondsia chinensis HOM05D003241 ORTHO05D003812 8.2e-12 74.7 98 49.0
arahy.Tifrunner.gnm1.ann1.61N80Q Arachis hypogaea HOM05D003241 ORTHO05D003812 1.1e-11 74.3 97 48.5
Eucgr.L01432 Eucalyptus grandis HOM05D003241 ORTHO05D003812 1.1e-11 74.3 99 48.5
Phvul.011G184800 Phaseolus vulgaris HOM05D003241 ORTHO05D003812 1.1e-11 74.3 99 52.5
CDE03G0251 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 1.4e-11 73.9 98 49.0
Dinv19008 Davidia involucrata HOM05D003241 ORTHO05D003812 1.4e-11 73.9 98 51.0
TAR381G1550 Trochodendron aralioides HOM05D003241 ORTHO05D003812 1.4e-11 73.9 99 49.5
TAR571G0002 Trochodendron aralioides HOM05D003241 ORTHO05D003812 1.4e-11 73.9 99 49.5
TAR625G1302 Trochodendron aralioides HOM05D003241 ORTHO05D003812 1.4e-11 73.9 99 49.5
VMungo1127G0135 Vigna mungo HOM05D003241 ORTHO05D003812 1.4e-11 73.9 99 49.5
ECA248G0833 Erigeron canadensis HOM05D003241 ORTHO05D003812 5.3e-11 72.0 96 49.0
unitig_749.g14191 Utricularia gibba HOM05D003241 ORTHO05D003812 1.2e-10 70.9 117 40.2
Oeu058578.1 Olea europaea HOM05D003241 ORTHO05D003812 2.0e-10 70.1 99 47.5
Hund17599 Selenicereus undatus HOM05D003241 ORTHO05D003812 4.5e-10 68.9 96 47.9
Oeu011820.1 Olea europaea HOM05D003241 ORTHO05D003812 5.9e-10 68.6 93 48.4
Medtr1g032020 Medicago truncatula HOM05D003241 ORTHO05D003812 1.0e-09 67.8 119 39.5
Medtr1g032350 Medicago truncatula HOM05D003241 ORTHO05D003812 1.0e-09 67.8 119 39.5
MBI18_g28212_MAGBIO Magnolia biondii HOM05D003241 ORTHO05D003812 1.7e-09 67.0 99 45.5
HanXRQChr09g0244631 Helianthus annuus HOM05D003241 ORTHO05D003812 2.2e-09 66.6 89 49.4
MBI14_g36867_MAGBIO Magnolia biondii HOM05D003241 ORTHO05D003812 2.2e-09 66.6 90 46.7
AUR62034840 Chenopodium quinoa HOM05D003241 ORTHO05D003812 1.1e-08 64.3 98 40.8
Aa31LG11G12850 Aethionema arabicum HOM05D003241 ORTHO05D003812 1.9e-08 63.5 97 42.3
RcHm_v2.0_Chr4g0416161 Rosa chinensis HOM05D003241 ORTHO05D003812 2.5e-08 63.2 98 45.9
Aqoxy4G03221 Aquilegia oxysepala HOM05D003241 ORTHO05D003812 3.2e-08 62.8 99 43.4
ECA248G0244 Erigeron canadensis HOM05D003241 ORTHO05D003812 7.2e-08 61.6 93 43.0
AUR62018246 Chenopodium quinoa HOM05D003241 ORTHO05D003812 9.4e-08 61.2 98 39.8
Lsat_1_v5_gn_1_54260 Lactuca sativa HOM05D003241 ORTHO05D003812 9.4e-08 61.2 93 46.2
DCAR_019828 Daucus carota HOM05D003241 ORTHO05D003812 1.2e-07 60.8 98 57.1
AL6G27800 Arabidopsis lyrata HOM05D003241 ORTHO05D003812 1.6e-07 60.5 97 43.3
AT5G16780 Arabidopsis thaliana HOM05D003241 ORTHO05D003812 1.6e-07 60.5 97 43.3
PGSC0003DMG400007426 Solanum tuberosum HOM05D003241 ORTHO05D003812 2.1e-07 60.1 99 54.5
RcHm_v2.0_Chr4g0416151 Rosa chinensis HOM05D003241 ORTHO05D003812 2.7e-07 59.7 98 44.9
A10p22440 Brassica napus HOM05D003241 ORTHO05D003812 6.1e-07 58.5 98 42.9
C09p60290 Brassica napus HOM05D003241 ORTHO05D003812 6.1e-07 58.5 98 42.9
BraA10t44303Z Brassica rapa HOM05D003241 ORTHO05D003812 6.1e-07 58.5 98 42.9
TPR.G37958 Trifolium pratense HOM05D003241 ORTHO05D003812 6.1e-07 58.5 98 41.8
BolC9t58862H Brassica oleracea HOM05D003241 ORTHO05D003812 8.0e-07 58.2 98 42.9
CARHR196380 Cardamine hirsuta HOM05D003241 ORTHO05D003812 8.0e-07 58.2 99 41.4
Thhalv10012684m.g Eutrema salsugineum HOM05D003241 ORTHO05D003812 1.0e-06 57.8 93 40.9
Peaxi162Scf00296g00721 Petunia axillaris HOM05D003241 ORTHO05D003812 1.4e-06 57.4 99 51.5
Sp6g27340 Schrenkiella parvula HOM05D003241 ORTHO05D003812 1.4e-06 57.4 97 44.3
Sopen11g004250 Solanum pennellii HOM05D003241 ORTHO05D003812 1.4e-06 57.4 98 54.1
EL10Ac6g15598 Beta vulgaris HOM05D003241 ORTHO05D003812 1.8e-06 57.0 87 43.7
SalBow3G1087 Salvia bowleyana HOM05D003241 ORTHO05D003812 1.8e-06 57.0 99 38.4
SGA_v2.0_scaffold31G12724 Striga asiatica HOM05D003241 ORTHO05D003812 1.8e-06 57.0 95 44.2
CAN.G321.38 Capsicum annuum HOM05D003241 ORTHO05D003812 2.3e-06 56.6 98 54.1
SalBow6G1729 Salvia bowleyana HOM05D003241 ORTHO05D003812 3.0e-06 56.2 96 39.6
SalBow6G5488 Salvia bowleyana HOM05D003241 ORTHO05D003812 3.0e-06 56.2 96 39.6
Carub.0006s1500 Capsella rubella HOM05D003241 ORTHO05D003812 4.0e-06 55.8 96 37.5
Solyc11g008470.2 Solanum lycopersicum HOM05D003241 ORTHO05D003812 4.0e-06 55.8 98 53.1


User provided reference genes

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