Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001612 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 7.4e-175 617.1 307 100.0
VMungo0540G1710 Vigna mungo HOM05D005064 ORTHO05D006611 7.0e-157 557.4 307 90.9
Glyma.13G010700 Glycine max HOM05D005064 ORTHO05D006611 2.9e-147 525.4 307 85.3
TPR.G19329 Trifolium pratense HOM05D005064 ORTHO05D006611 2.8e-137 492.3 307 79.8
Ca_16367_v3 Cicer arietinum L. HOM05D005064 ORTHO05D006611 1.7e-134 483.0 307 77.9
Medtr3g083250 Medicago truncatula HOM05D005064 ORTHO05D006611 2.9e-134 482.3 307 78.8
Lj6g0012785 Lotus japonicus HOM05D005064 ORTHO05D006611 5.4e-133 478.0 302 78.8
Psat5g101280 Pisum sativum HOM05D005064 ORTHO05D006611 5.6e-130 468.0 307 75.6
Lalb_Chr22g0360891 Lupinus albus HOM05D005064 ORTHO05D006611 1.7e-126 456.4 307 76.9
arahy.Tifrunner.gnm1.ann1.168PWC Arachis hypogaea HOM05D005064 ORTHO05D006611 2.4e-117 426.0 303 71.9
arahy.Tifrunner.gnm1.ann1.XPQW08 Arachis hypogaea HOM05D005064 ORTHO05D006611 4.1e-117 425.2 303 71.9
TPR.G18982 Trifolium pratense HOM05D005064 ORTHO05D006611 8.9e-112 407.5 296 69.6
Ciclev10013403m.g Citrus clementina HOM05D005064 ORTHO05D006611 2.2e-102 376.3 304 63.8
QL07p034075 Quercus lobata HOM05D005064 ORTHO05D006611 2.9e-102 375.9 307 63.8
CANSAT35G0044 Cannabis sativa HOM05D005064 ORTHO05D006611 3.2e-101 372.5 304 64.5
Manes.09G111200 Manihot esculenta HOM05D005064 ORTHO05D006611 1.6e-100 370.2 302 62.6
ClCG10G022430 Citrullus lanatus HOM05D005064 ORTHO05D006611 7.8e-100 367.9 304 61.5
Lj2C68T2 Lonicera japonica HOM05D005064 ORTHO05D006611 1.3e-99 367.1 303 61.4
Atru.chr8.2328 Acer truncatum HOM05D005064 ORTHO05D006611 3.0e-99 365.9 303 62.7
Potri.014G189600 Populus trichocarpa HOM05D005064 ORTHO05D006611 1.1e-98 364.0 304 62.5
Haze_21075 Corylus avellana HOM05D005064 ORTHO05D006611 2.5e-98 362.8 297 63.6
MELO3C009135.2 Cucumis melo HOM05D005064 ORTHO05D006611 2.5e-98 362.8 304 60.2
Sed0013669 Sechium edule HOM05D005064 ORTHO05D006611 4.3e-98 362.1 304 59.9
RcHm_v2.0_Chr3g0484931 Rosa chinensis HOM05D005064 ORTHO05D006611 5.6e-98 361.7 303 62.4
CiPaw.09G214500 Carya illinoinensis HOM05D005064 ORTHO05D006611 7.3e-98 361.3 309 61.8
CsaV3_3G033440 Cucumis sativus L. HOM05D005064 ORTHO05D006611 7.3e-98 361.3 304 59.2
Duzib093G0745 Durio zibethinus HOM05D005064 ORTHO05D006611 2.8e-97 359.4 304 62.8
Thecc.05G007600 Theobroma cacao HOM05D005064 ORTHO05D006611 6.2e-97 358.2 306 63.1
MD01G1008700 Malus domestica HOM05D005064 ORTHO05D006611 2.4e-96 356.3 309 61.8
FvH4_1g25820 Fragaria vesca HOM05D005064 ORTHO05D006611 3.1e-96 355.9 303 61.4
GSVIVG01030280001 Vitis vinifera HOM05D005064 ORTHO05D006611 3.1e-96 355.9 309 62.5
FAN23G3111 Fragaria x ananassa HOM05D005064 ORTHO05D006611 2.0e-95 353.2 303 60.7
FAN26G2490 Fragaria x ananassa HOM05D005064 ORTHO05D006611 2.0e-95 353.2 303 60.7
Prupe.4G287200 Prunus persica HOM05D005064 ORTHO05D006611 7.6e-95 351.3 304 61.2
Sabra14G0144800 Salix brachista HOM05D005064 ORTHO05D006611 9.9e-95 350.9 302 60.3
Dinv35394 Davidia involucrata HOM05D005064 ORTHO05D006611 1.7e-94 350.1 289 64.0
Gorai.012G119100 Gossypium raimondii HOM05D005064 ORTHO05D006611 3.8e-94 349.0 304 61.8
TWI74G0298 Tripterygium wilfordii HOM05D005064 ORTHO05D006611 4.9e-94 348.6 304 58.9
Gohir.A04G095400 Gossypium hirsutum HOM05D005064 ORTHO05D006611 5.4e-93 345.1 304 61.8
Gohir.D04G135300 Gossypium hirsutum HOM05D005064 ORTHO05D006611 5.4e-93 345.1 304 61.8
CSS0042379 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 9.3e-93 344.4 305 62.0
Cpa.g.sc5.230 Carica papaya HOM05D005064 ORTHO05D006611 2.7e-92 342.8 308 58.4
COL.COLO4_14461 Corchorus olitorius HOM05D005064 ORTHO05D006611 2.7e-92 342.8 290 62.8
HanXRQChr15g0486851 Helianthus annuus HOM05D005064 ORTHO05D006611 6.0e-92 341.7 302 57.9
Medtr6g033115 Medicago truncatula HOM05D005064 ORTHO05D006611 6.0e-92 341.7 272 67.3
FAN19G0240 Fragaria x ananassa HOM05D005064 ORTHO05D006611 3.0e-91 339.3 339 54.9
Nn2g11003 Nelumbo nucifera HOM05D005064 ORTHO05D006611 3.9e-91 339.0 298 59.1
EL10Ac5g12491 Beta vulgaris HOM05D005064 ORTHO05D006611 5.6e-90 335.1 303 55.1
Hund25531 Selenicereus undatus HOM05D005064 ORTHO05D006611 2.8e-89 332.8 303 54.8
AUR62030526 Chenopodium quinoa HOM05D005064 ORTHO05D006611 4.8e-89 332.0 303 54.8
THA.LOC104816179 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 1.1e-88 330.9 302 58.6
TAR633G1737 Trochodendron aralioides HOM05D005064 ORTHO05D006611 3.1e-88 329.3 304 57.9
AUR62030766 Chenopodium quinoa HOM05D005064 ORTHO05D006611 4.0e-88 328.9 303 54.5
Migut.J00101 Erythranthe guttata HOM05D005064 ORTHO05D006611 1.2e-87 327.4 302 55.6
Eucgr.K02953 Eucalyptus grandis HOM05D005064 ORTHO05D006611 1.2e-87 327.4 307 56.4
ECA234G3016 Erigeron canadensis HOM05D005064 ORTHO05D006611 2.2e-86 323.2 307 57.3
AT5G01630 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 2.9e-86 322.8 310 54.2
Cc06_g00810 Coffea canephora HOM05D005064 ORTHO05D006611 6.4e-86 321.6 294 59.2
MBI03_g13049_MAGBIO Magnolia biondii HOM05D005064 ORTHO05D006611 4.2e-85 318.9 303 55.4
Aa31LG1G23250 Aethionema arabicum HOM05D005064 ORTHO05D006611 7.1e-85 318.2 312 54.2
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 7.1e-85 318.2 312 54.2
CARHR211980 Cardamine hirsuta HOM05D005064 ORTHO05D006611 7.1e-85 318.2 310 52.9
Sp6g40890 Schrenkiella parvula HOM05D005064 ORTHO05D006611 9.3e-85 317.8 305 53.8
Carub.0006s0020 Capsella rubella HOM05D005064 ORTHO05D006611 6.0e-84 315.1 305 53.4
Peaxi162Scf00744g00354 Petunia axillaris HOM05D005064 ORTHO05D006611 6.0e-84 315.1 284 57.0
Nitab4.5_0010437g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 7.9e-84 314.7 314 54.1
SalBow5G0042 Salvia bowleyana HOM05D005064 ORTHO05D006611 7.9e-84 314.7 301 55.1
SalBow5G1296 Salvia bowleyana HOM05D005064 ORTHO05D006611 7.9e-84 314.7 301 55.1
Thhalv10012491m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 1.0e-83 314.3 307 53.7
AL6G10420 Arabidopsis lyrata HOM05D005064 ORTHO05D006611 1.3e-83 313.9 310 52.9
AT4G00020 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 1.8e-83 313.5 284 57.0
MSTRG.18977 Avicennia marina HOM05D005064 ORTHO05D006611 3.0e-83 312.8 302 54.3
Aqoxy2G00779 Aquilegia oxysepala HOM05D005064 ORTHO05D006611 3.9e-83 312.4 305 53.8
BraA03t09408Z Brassica rapa HOM05D005064 ORTHO05D006611 2.5e-82 309.7 305 53.1
C03p00330 Brassica napus HOM05D005064 ORTHO05D006611 5.6e-82 308.5 307 53.1
THA.LOC104798645 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 5.6e-82 308.5 303 54.8
BcaB01g06242 Brassica carinata HOM05D005064 ORTHO05D006611 9.6e-82 307.8 314 51.3
BcaB01g06109 Brassica carinata HOM05D005064 ORTHO05D006611 1.3e-81 307.4 307 53.1
A03p00180 Brassica napus HOM05D005064 ORTHO05D006611 1.3e-81 307.4 305 52.8
BolC3t12595H Brassica oleracea HOM05D005064 ORTHO05D006611 1.3e-81 307.4 307 53.1
Thhalv10027627m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 1.6e-81 307.0 284 56.3
Sopen02g008440 Solanum pennellii HOM05D005064 ORTHO05D006611 3.7e-81 305.8 302 54.0
PSO801G0135 Papaver somniferum HOM05D005064 ORTHO05D006611 4.8e-81 305.4 306 55.6
Solyc02g050210.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 1.1e-80 304.3 302 54.0
PSO339G1571 Papaver somniferum HOM05D005064 ORTHO05D006611 2.4e-80 303.1 306 55.2
vmacro04273 Vaccinium macrocarpon HOM05D005064 ORTHO05D006611 2.4e-80 303.1 312 53.8
FAN28G2142 Fragaria x ananassa HOM05D005064 ORTHO05D006611 3.1e-80 302.8 301 55.5
SGA_v2.0_scaffold85G26687 Striga asiatica HOM05D005064 ORTHO05D006611 3.1e-80 302.8 303 51.5
Sp7g05130 Schrenkiella parvula HOM05D005064 ORTHO05D006611 5.3e-80 302.0 305 52.5
CAN.G989.4 Capsicum annuum HOM05D005064 ORTHO05D006611 6.9e-80 301.6 284 54.9
Oeu027330.4 Olea europaea HOM05D005064 ORTHO05D006611 3.4e-79 299.3 290 54.8
ATR0594G137 Amborella trichopoda HOM05D005064 ORTHO05D006611 1.0e-78 297.7 305 50.8
CSS0001431 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 2.9e-78 296.2 303 56.4
Lsat_1_v5_gn_5_149520 Lactuca sativa HOM05D005064 ORTHO05D006611 2.9e-78 296.2 286 53.8
A05p16640 Brassica napus HOM05D005064 ORTHO05D006611 1.4e-77 293.9 305 51.8
C06p17140 Brassica napus HOM05D005064 ORTHO05D006611 9.3e-77 291.2 305 51.8
BcaC08g44292 Brassica carinata HOM05D005064 ORTHO05D006611 2.3e-75 286.6 284 53.5
Rhsim05G0225400 Rhododendron simsii HOM05D005064 ORTHO05D006611 8.7e-75 284.6 303 52.1
BolC6t36909H Brassica oleracea HOM05D005064 ORTHO05D006611 3.3e-74 282.7 284 53.2
Nitab4.5_0006212g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 9.6e-74 281.2 296 52.0
HPP92_013858 Vanilla planifolia HOM05D005064 ORTHO05D006611 9.6e-74 281.2 304 48.7
Os01g0164800 Oryza sativa ssp. japonica HOM05D005064 ORTHO05D006611 1.3e-73 280.8 305 48.2
BraA05t20569Z Brassica rapa HOM05D005064 ORTHO05D006611 2.8e-73 279.6 294 51.7
Zm00001eb419130 Zea mays HOM05D005064 ORTHO05D006611 1.1e-72 277.7 304 47.4
HPP92_013842 Vanilla planifolia HOM05D005064 ORTHO05D006611 1.4e-72 277.3 304 48.0
SHI12869 Sapria himalayana HOM05D005064 ORTHO05D006611 2.5e-69 266.5 295 49.2
Nitab4.5_0001246g0050 Nicotiana tabacum HOM05D005064 ORTHO05D006611 4.3e-66 255.8 284 48.9
BcaB04g17743 Brassica carinata HOM05D005064 ORTHO05D006611 1.5e-63 247.3 242 54.5
CDE04G0109 Ceratophyllum demersum HOM05D005064 ORTHO05D006611 2.1e-60 236.9 233 52.8
DCAR_030962 Daucus carota HOM05D005064 ORTHO05D008158 6.7e-59 231.9 287 46.7
SEGI_30642 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 2.6e-58 229.9 319 42.0
Medtr0191s0030 Medicago truncatula HOM05D005064 ORTHO05D006611 1.8e-56 223.8 148 76.4
SEGI_19397 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 1.8e-56 223.8 324 41.4
unitig_21.g20911 Utricularia gibba HOM05D005064 ORTHO05D006611 1.1e-53 214.5 284 44.4
Ah.12g059020 Amaranthus hybridus HOM05D005064 ORTHO05D006611 8.2e-49 198.4 234 49.1
Haze_21131 Corylus avellana HOM05D005064 ORTHO05D006611 3.0e-43 179.9 278 41.7
Haze_21134 Corylus avellana HOM05D005064 ORTHO05D006611 1.2e-42 177.9 278 41.4
Mapoly0045s0096 Marchantia polymorpha HOM05D005064 ORTHO05D006611 6.1e-36 155.6 287 36.6
AagrBONN_evm.TU.Sc2ySwM_362.1800 Anthoceros agrestis HOM05D005064 ORTHO05D006611 4.1e-32 142.9 299 33.1
CBR_g19769 Chara braunii HOM05D005064 ORTHO05D006611 1.9e-29 134.0 296 29.4
Sabra16G0120100 Salix brachista HOM05D005064 ORTHO05D050424 1.4e-08 64.7 56 53.6


User provided reference genes

Program Settings