Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 2.4e-292 1008.1 492 100.0
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 1.4e-239 832.8 487 84.4
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 2.1e-216 755.7 487 77.2
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 4.9e-213 744.6 478 75.3
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 2.1e-211 739.2 481 75.1
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 1.1e-209 733.4 481 74.4
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.8e-207 726.1 480 74.6
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 1.8e-207 726.1 478 74.3
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 5.3e-207 724.5 474 75.1
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 2.1e-187 659.4 473 69.1
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 4.7e-187 658.3 478 68.4
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 3.3e-185 652.1 472 68.6
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 2.6e-182 642.5 473 68.1
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 1.0e-181 640.6 473 67.9
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 2.9e-181 639.0 477 67.3
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 8.5e-181 637.5 478 66.5
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 1.4e-180 636.7 473 66.2
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 1.9e-180 636.3 474 68.1
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 3.2e-180 635.6 476 66.8
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 1.2e-179 633.6 479 64.7
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 1.4e-178 630.2 474 66.9
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 4.4e-177 625.2 480 65.2
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 7.4e-177 624.4 476 65.3
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 7.4e-177 624.4 331 93.4
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 9.7e-177 624.0 477 66.2
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 2.8e-176 622.5 474 66.0
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 4.8e-176 621.7 487 64.5
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 9.1e-175 617.5 477 65.6
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 1.6e-174 616.7 476 65.1
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 1.6e-174 616.7 441 68.5
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 1.0e-173 614.0 475 64.6
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 2.2e-173 612.8 472 64.0
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 1.1e-172 610.5 471 64.3
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 1.9e-172 609.8 470 63.8
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.9e-172 609.8 476 65.1
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 1.9e-172 609.8 474 63.9
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 4.2e-172 608.6 472 63.1
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 1.2e-171 607.1 477 65.2
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 2.1e-171 606.3 477 63.1
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 2.7e-171 605.9 471 64.3
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 2.7e-171 605.9 474 63.5
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 3.6e-171 605.5 479 65.6
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 6.1e-171 604.7 476 63.2
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.0e-170 604.0 472 63.6
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.0e-170 604.0 475 63.4
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 1.8e-170 603.2 478 62.3
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 8.8e-170 600.9 478 63.8
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 2.6e-169 599.4 479 63.0
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 1.7e-168 596.7 476 62.8
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 1.4e-167 593.6 484 60.5
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.4e-167 593.6 477 63.1
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 2.4e-167 592.8 479 61.4
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 3.1e-167 592.4 490 60.2
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 4.1e-167 592.0 480 60.6
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 5.3e-167 591.7 484 61.2
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 1.2e-166 590.5 485 60.6
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 1.2e-166 590.5 483 61.5
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 1.6e-166 590.1 467 62.5
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 7.7e-166 587.8 483 61.3
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 1.3e-165 587.0 483 61.3
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 2.2e-165 586.3 448 64.3
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 2.9e-165 585.9 485 60.4
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 3.8e-165 585.5 485 60.4
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 3.8e-165 585.5 484 60.3
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 1.1e-164 583.9 486 60.7
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 1.5e-164 583.6 485 62.5
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 3.2e-164 582.4 474 61.0
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 5.5e-164 581.6 483 60.7
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 5.5e-164 581.6 481 60.5
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 8.0e-163 577.8 474 60.8
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 1.4e-162 577.0 489 59.3
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 5.2e-162 575.1 472 61.7
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 1.2e-161 573.9 481 61.5
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 4.4e-161 572.0 494 59.9
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 2.5e-156 556.2 341 80.1
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 1.2e-153 547.4 426 61.7
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 1.7e-152 543.5 431 60.8
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 1.0e-149 534.3 453 60.9
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 2.9e-149 532.7 473 58.8
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 6.6e-149 531.6 476 56.9
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 2.0e-145 520.0 374 67.9
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 2.6e-145 519.6 493 55.6
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 3.4e-145 519.2 460 57.6
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 8.3e-144 514.6 473 56.0
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 1.7e-133 480.3 391 59.8
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 5.6e-132 475.3 497 48.5
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 1.2e-131 474.2 379 62.5
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 4.1e-127 459.1 317 70.0
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 5.8e-121 438.7 254 85.4
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 6.4e-120 435.3 461 47.7
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 1.7e-117 427.2 484 45.2
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 3.8e-104 382.9 428 46.0
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 2.6e-97 360.1 435 42.3
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 8.4e-96 355.1 386 44.6
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 3.5e-94 349.7 253 67.6
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 2.5e-92 343.6 386 44.6
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.6e-91 340.9 362 48.9
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 4.8e-91 339.3 277 62.1
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 1.4e-90 337.8 272 62.9
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 5.0e-88 329.3 297 58.6
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 1.3e-85 321.2 262 61.5
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 6.3e-83 312.4 400 40.2
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 4.1e-82 309.7 452 39.6
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.2e-78 298.1 317 50.8
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 1.8e-77 294.3 184 78.8
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.1e-70 270.8 252 56.7
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 2.2e-67 260.8 208 60.1
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 3.2e-63 246.9 206 61.2
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 1.6e-57 228.0 237 53.2
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.6e-57 228.0 212 52.4
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 2.9e-48 197.2 125 72.0
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 2.5e-47 194.1 118 75.4
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 3.8e-40 170.2 116 68.1
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 6.8e-29 132.9 110 61.8
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 1.6e-25 121.7 115 52.2
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 5.0e-24 116.7 98 60.2
MD06G1154400 Malus domestica HOM05D006543 ORTHO05D008308 4.6e-09 67.0 205 28.3
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 7.8e-09 66.2 205 27.8
MD06G1157100 Malus domestica HOM05D006543 ORTHO05D008308 7.8e-09 66.2 70 52.9
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 1.7e-08 65.1 33 87.9
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 3.0e-08 64.3 44 65.9


User provided reference genes

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