Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G163800 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 1.9e-39 165.2 76 100.0
Nn1g06872 Nelumbo nucifera HOM05D000207 ORTHO05D004956 3.6e-38 161.0 76 96.1
CANSAT54G2786 Cannabis sativa HOM05D000207 ORTHO05D004956 6.1e-38 160.2 76 94.7
Phvul.003G055200 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 6.1e-38 160.2 76 96.1
GSVIVG01027834001 Vitis vinifera HOM05D000207 ORTHO05D004956 6.1e-38 160.2 76 94.7
CDE06G2823 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 8.0e-38 159.8 76 94.7
Glyma.08G291500 Glycine max HOM05D000207 ORTHO05D004956 8.0e-38 159.8 76 96.1
Glyma.18G132700 Glycine max HOM05D000207 ORTHO05D004956 8.0e-38 159.8 76 96.1
Manes.15G041801 Manihot esculenta HOM05D000207 ORTHO05D004956 8.0e-38 159.8 76 94.7
Os08g0444100 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 8.0e-38 159.8 76 94.7
Aqoxy1G01024 Aquilegia oxysepala HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
ClCG01G024000 Citrullus lanatus HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
Cc03_g05640 Coffea canephora HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
Duzib235G1015 Durio zibethinus HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
Gohir.A05G111600 Gossypium hirsutum HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
Gohir.D05G112000 Gossypium hirsutum HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
Gorai.009G116200 Gossypium raimondii HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
Lalb_Chr02g0158811 Lupinus albus HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
Os08g0278966 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 94.7
PSO170G5684 Papaver somniferum HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
PSO198G0064 Papaver somniferum HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
PSO210G1216 Papaver somniferum HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
PGR031G0434 Punica granatum HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
Hund03049 Selenicereus undatus HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
Sc25g0003710 Simmondsia chinensis HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
HPP92_005049 Vanilla planifolia HOM05D000207 ORTHO05D004956 1.0e-37 159.5 76 93.4
CANSAT78G1427 Cannabis sativa HOM05D000207 ORTHO05D004956 1.4e-37 159.1 76 93.4
AUR62026315 Chenopodium quinoa HOM05D000207 ORTHO05D004956 1.4e-37 159.1 76 92.1
AUR62026510 Chenopodium quinoa HOM05D000207 ORTHO05D004956 1.4e-37 159.1 76 92.1
MELO3C007190.2 Cucumis melo HOM05D000207 ORTHO05D004956 1.4e-37 159.1 76 92.1
CsaV3_6G051140 Cucumis sativus L. HOM05D000207 ORTHO05D004956 1.4e-37 159.1 76 92.1
Duzib043G0002 Durio zibethinus HOM05D000207 ORTHO05D004956 1.4e-37 159.1 76 92.1
Duzib160G0169 Durio zibethinus HOM05D000207 ORTHO05D004956 1.4e-37 159.1 76 92.1
Potri.008G168000 Populus trichocarpa HOM05D000207 ORTHO05D004956 1.4e-37 159.1 76 93.4
TWI53G1374 Tripterygium wilfordii HOM05D000207 ORTHO05D004956 1.4e-37 159.1 76 93.4
Ca_08207_v3 Cicer arietinum L. HOM05D000207 ORTHO05D004956 1.8e-37 158.7 76 93.4
Lj3g0015983 Lotus japonicus HOM05D000207 ORTHO05D004956 1.8e-37 158.7 76 93.4
Psat4g126040 Pisum sativum HOM05D000207 ORTHO05D004956 1.8e-37 158.7 76 93.4
Psat6g018880 Pisum sativum HOM05D000207 ORTHO05D004956 1.8e-37 158.7 76 93.4
Atru.chr4.2043 Acer truncatum HOM05D000207 ORTHO05D004956 2.3e-37 158.3 76 93.4
Atru.chr4.2046 Acer truncatum HOM05D000207 ORTHO05D004956 2.3e-37 158.3 76 93.4
Eucgr.E04319 Eucalyptus grandis HOM05D000207 ORTHO05D004956 2.3e-37 158.3 76 93.4
Lsat_1_v5_gn_3_117461 Lactuca sativa HOM05D000207 ORTHO05D004956 2.3e-37 158.3 76 92.1
BcaB02g08614 Brassica carinata HOM05D000207 ORTHO05D000606 3.0e-37 157.9 76 93.4
BcaC06g35508 Brassica carinata HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 93.4
A04p07690 Brassica napus HOM05D000207 ORTHO05D000606 3.0e-37 157.9 76 93.4
A07p09140 Brassica napus HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 93.4
C04p41370 Brassica napus HOM05D000207 ORTHO05D000606 3.0e-37 157.9 76 93.4
C07p14090 Brassica napus HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 93.4
BolC7t41906H Brassica oleracea HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 93.4
BraA07t28708Z Brassica rapa HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 93.4
Ciclev10013219m.g Citrus clementina HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 93.4
Dinv27061 Davidia involucrata HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 92.1
Thhalv10021852m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 93.4
HanXRQChr13g0421281 Helianthus annuus HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 92.1
Potri.010G070500 Populus trichocarpa HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 92.1
Thecc.06G005500 Theobroma cacao HOM05D000207 ORTHO05D004956 3.0e-37 157.9 76 92.1
Ciclev10006856m.g Citrus clementina HOM05D000207 ORTHO05D004956 4.0e-37 157.5 76 92.1
MELO3C006416.2 Cucumis melo HOM05D000207 ORTHO05D004956 4.0e-37 157.5 76 92.1
CsaV3_3G012020 Cucumis sativus L. HOM05D000207 ORTHO05D004956 4.0e-37 157.5 76 92.1
ECA232G2626 Erigeron canadensis HOM05D000207 ORTHO05D004956 4.0e-37 157.5 76 90.8
ECA240G3918 Erigeron canadensis HOM05D000207 ORTHO05D004956 4.0e-37 157.5 76 90.8
Mapoly0001s0403 Marchantia polymorpha HOM05D000207 ORTHO05D004956 4.0e-37 157.5 76 94.7
PSO210G6748 Papaver somniferum HOM05D000207 ORTHO05D004956 4.0e-37 157.5 76 90.8
Hund11897 Selenicereus undatus HOM05D000207 ORTHO05D004956 4.0e-37 157.5 76 92.1
Nitab4.5_0001379g0120 Nicotiana tabacum HOM05D000207 ORTHO05D004956 5.2e-37 157.1 76 92.1
Nitab4.5_0003038g0050 Nicotiana tabacum HOM05D000207 ORTHO05D004956 5.2e-37 157.1 76 92.1
Solyc08g069080.4 Solanum lycopersicum HOM05D000207 ORTHO05D004956 5.2e-37 157.1 76 92.1
Sopen04g004070 Solanum pennellii HOM05D000207 ORTHO05D004956 5.2e-37 157.1 76 92.1
PGSC0003DMG400025301 Solanum tuberosum HOM05D000207 ORTHO05D004956 5.2e-37 157.1 76 92.1
THA.LOC104808632 Tarenaya hassleriana HOM05D000207 ORTHO05D004956 5.2e-37 157.1 76 90.8
TAR365G0659 Trochodendron aralioides HOM05D000207 ORTHO05D004956 5.2e-37 157.1 76 90.8
BcaC02g09324 Brassica carinata HOM05D000207 ORTHO05D004956 6.8e-37 156.8 76 92.1
BolC4t25716H Brassica oleracea HOM05D000207 ORTHO05D004956 6.8e-37 156.8 76 92.1
CSS0020261 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004956 6.8e-37 156.8 76 92.1
CARHR099290 Cardamine hirsuta HOM05D000207 ORTHO05D004956 6.8e-37 156.8 76 92.1
Thhalv10026688m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 6.8e-37 156.8 76 92.1
Hma1.2p1_0992F.1_g245270 Hydrangea macrophylla HOM05D000207 ORTHO05D004956 6.8e-37 156.8 75 92.0
Sp3g20990 Schrenkiella parvula HOM05D000207 ORTHO05D004956 6.8e-37 156.8 76 92.1
AT4G14342 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 8.9e-37 156.4 76 92.1
Sopen08g022730 Solanum pennellii HOM05D000207 ORTHO05D004956 8.9e-37 156.4 76 90.8
ClCG05G004290 Citrullus lanatus HOM05D000207 ORTHO05D004956 1.2e-36 156.0 76 90.8
COL.COLO4_26870 Corchorus olitorius HOM05D000207 ORTHO05D004956 1.2e-36 156.0 76 89.5
Dinv36552 Davidia involucrata HOM05D000207 ORTHO05D004956 1.2e-36 156.0 76 92.1
Medtr8g062750 Medicago truncatula HOM05D000207 ORTHO05D004956 1.2e-36 156.0 76 90.8
Sed0003648 Sechium edule HOM05D000207 ORTHO05D004956 1.2e-36 156.0 76 90.8
Sed0023527 Sechium edule HOM05D000207 ORTHO05D004956 1.2e-36 156.0 76 90.8
Solyc04g008890.3 Solanum lycopersicum HOM05D000207 ORTHO05D004956 1.2e-36 156.0 76 90.8
DCAR_024259 Daucus carota HOM05D000207 ORTHO05D004956 1.5e-36 155.6 76 89.5
Lsat_1_v5_gn_6_103061 Lactuca sativa HOM05D000207 ORTHO05D004956 1.5e-36 155.6 76 89.5
Sp7g12410 Schrenkiella parvula HOM05D000207 ORTHO05D004956 1.5e-36 155.6 76 90.8
AL7G41900 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 2.0e-36 155.2 76 90.8
Carub.0003s2357 Capsella rubella HOM05D000207 ORTHO05D004956 2.0e-36 155.2 76 90.8
HanXRQChr03g0091521 Helianthus annuus HOM05D000207 ORTHO05D004956 2.0e-36 155.2 76 89.5
Prupe.4G214000 Prunus persica HOM05D000207 ORTHO05D004956 2.6e-36 154.8 76 89.5
Migut.N00279 Erythranthe guttata HOM05D000207 ORTHO05D004956 3.4e-36 154.5 76 89.5
Medtr3g019300 Medicago truncatula HOM05D000207 ORTHO05D004956 3.4e-36 154.5 76 90.8
Medtr3g019310 Medicago truncatula HOM05D000207 ORTHO05D004956 3.4e-36 154.5 76 90.8
Actinidia39908 Actinidia chinensis HOM05D000207 ORTHO05D004956 4.4e-36 154.1 76 89.5
MD03G1200200 Malus domestica HOM05D000207 ORTHO05D004956 4.4e-36 154.1 76 88.2
AL3G37970 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 5.8e-36 153.7 76 89.5
AT3G23325 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 5.8e-36 153.7 76 89.5
MD11G1217300 Malus domestica HOM05D000207 ORTHO05D004956 5.8e-36 153.7 76 88.2
MSTRG.21917 Avicennia marina HOM05D000207 ORTHO05D004956 7.5e-36 153.3 76 88.2
CiPaw.02G111100 Carya illinoinensis HOM05D000207 ORTHO05D004956 7.5e-36 153.3 76 89.5
AagrBONN_evm.TU.Sc2ySwM_344.2015 Anthoceros agrestis HOM05D000207 ORTHO05D004956 9.8e-36 152.9 76 89.5
PGSC0003DMG400026872 Solanum tuberosum HOM05D000207 ORTHO05D004956 1.3e-35 152.5 77 90.9
CBR_g8906 Chara braunii HOM05D000207 ORTHO05D004956 1.7e-35 152.1 76 90.8
RcHm_v2.0_Chr5g0039761 Rosa chinensis HOM05D000207 ORTHO05D004956 2.2e-35 151.8 76 86.8
SMO232G0034 Selaginella moellendorffii HOM05D000207 ORTHO05D004956 2.2e-35 151.8 75 90.7
unitig_748.g7329 Utricularia gibba HOM05D000207 ORTHO05D000606 2.2e-35 151.8 76 88.2
FvH4_3g22750 Fragaria vesca HOM05D000207 ORTHO05D004956 4.9e-35 150.6 76 85.5
FvH4_7g05750 Fragaria vesca HOM05D000207 ORTHO05D004956 4.9e-35 150.6 76 85.5
FAN16G2624 Fragaria x ananassa HOM05D000207 ORTHO05D004956 4.9e-35 150.6 76 85.5
FAN25G2312 Fragaria x ananassa HOM05D000207 ORTHO05D004956 4.9e-35 150.6 76 85.5
Migut.G00508 Erythranthe guttata HOM05D000207 ORTHO05D004956 8.3e-35 149.8 76 85.5
Actinidia11350 Actinidia chinensis HOM05D000207 ORTHO05D004956 1.4e-34 149.1 76 86.8
FAN16G2286 Fragaria x ananassa HOM05D000207 ORTHO05D004956 2.4e-34 148.3 76 84.2
FAN14G2395 Fragaria x ananassa HOM05D000709 ORTHO05D004956 1.6e-33 145.6 76 81.6
MBI07_g16899_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 1.6e-33 145.6 96 74.0
FAN05G5047 Fragaria x ananassa HOM05D000709 ORTHO05D004956 2.7e-33 144.8 76 81.6
FAN09G1394 Fragaria x ananassa HOM05D000709 ORTHO05D004956 1.0e-32 142.9 76 80.3
vmacro15450 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 3.0e-32 141.4 99 68.7
FAN01G2221 Fragaria x ananassa HOM05D000207 ORTHO05D004956 6.6e-32 140.2 92 70.7
RcHm_v2.0_Chr7g0179491 Rosa chinensis HOM05D000207 ORTHO05D004956 1.9e-31 138.7 76 81.6
MCO09G487 Micromonas commoda HOM05D000207 ORTHO05D004956 2.5e-31 138.3 76 80.3
FAN02G2410 Fragaria x ananassa HOM05D000709 ORTHO05D004956 3.3e-31 137.9 76 77.6
VMungo1127G0964 Vigna mungo HOM05D000207 ORTHO05D004956 4.7e-30 134.0 64 95.3
arahy.Tifrunner.gnm1.ann1.Q94Q39 Arachis hypogaea HOM05D000677 ORTHO05D000727 4.0e-29 131.0 63 95.2
Cre14.g627900 Chlamydomonas reinhardtii HOM05D000207 ORTHO05D004956 2.0e-28 128.6 74 70.3
arahy.Tifrunner.gnm1.ann1.AU04TH Arachis hypogaea HOM05D000207 ORTHO05D004956 3.4e-28 127.9 60 96.7
arahy.Tifrunner.gnm1.ann1.DCT04E Arachis hypogaea HOM05D000207 ORTHO05D004956 3.4e-28 127.9 60 96.7
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 3.4e-28 127.9 60 96.7
Cpa.g.c34811.1 Carica papaya HOM05D000207 ORTHO05D004956 3.4e-28 127.9 60 96.7
Sabra10G0036900 Salix brachista HOM05D000207 ORTHO05D004956 3.4e-28 127.9 68 83.8
EL10Ac3g04993 Beta vulgaris HOM05D000001 ORTHO05D000003 7.5e-28 126.7 60 93.3
Oeu005091.1 Olea europaea HOM05D000207 ORTHO05D004956 7.5e-28 126.7 60 93.3
QL06p018332 Quercus lobata HOM05D000207 ORTHO05D004956 7.5e-28 126.7 60 93.3
arahy.Tifrunner.gnm1.ann1.6C1XPZ Arachis hypogaea HOM05D000207 ORTHO05D004956 9.8e-28 126.3 60 95.0
Sabra08G0128000 Salix brachista HOM05D000207 ORTHO05D004956 9.8e-28 126.3 60 93.3
BraA04t16461Z Brassica rapa HOM05D000207 ORTHO05D000606 1.7e-27 125.6 61 91.8
PGSC0003DMG400029581 Solanum tuberosum HOM05D000207 ORTHO05D004956 1.7e-27 125.6 62 88.7
HPP92_005064 Vanilla planifolia HOM05D000207 ORTHO05D004956 1.7e-27 125.6 60 91.7
vmacro21393 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 2.2e-27 125.2 64 85.9
Zm00001eb176950 Zea mays HOM05D000207 ORTHO05D004956 2.2e-27 125.2 60 93.3
CiPaw.01G183100 Carya illinoinensis HOM05D000207 ORTHO05D004956 2.9e-27 124.8 60 91.7
vmacro21388 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 2.9e-27 124.8 62 87.1
SalBow3G2895 Salvia bowleyana HOM05D000207 ORTHO05D004956 3.7e-27 124.4 64 85.9
FAN06G2225 Fragaria x ananassa HOM05D000207 ORTHO05D004956 4.9e-27 124.0 66 80.3
Aa31LG9G3040 Aethionema arabicum HOM05D001185 ORTHO05D002551 6.4e-27 123.6 60 91.7
Cfa022948 Carpinus fangiana HOM05D000411 ORTHO05D004956 1.1e-26 122.9 59 93.2
PSO063G3293 Papaver somniferum HOM05D000207 ORTHO05D004956 1.1e-26 122.9 60 88.3
FAN03G1535 Fragaria x ananassa HOM05D000207 ORTHO05D004956 2.4e-26 121.7 60 86.7
FAN10G1241 Fragaria x ananassa HOM05D000207 ORTHO05D004956 2.4e-26 121.7 60 86.7
PRCOL_00006150 Prasinoderma coloniale HOM05D000207 ORTHO05D004956 5.4e-26 120.6 76 68.4
CAN.G274.30 Capsicum annuum HOM05D000207 ORTHO05D004956 9.2e-26 119.8 58 89.7
CDE02G4280 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 1.2e-25 119.4 57 93.0
MBI16_g42515_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 1.1e-23 112.8 68 79.4
vmacro12999 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 2.5e-23 111.7 60 83.3
AagrBONN_evm.TU.Sc2ySwM_369.181 Anthoceros agrestis HOM05D000207 ORTHO05D004956 7.3e-23 110.2 57 82.5
unitig_32.g11701 Utricularia gibba HOM05D000207 ORTHO05D004956 1.6e-22 109.0 85 64.7
A06p07840 Brassica napus HOM05D000207 ORTHO05D004956 1.1e-21 106.3 53 88.7
Pp3c25_1640 Physcomitrium patens HOM05D000207 ORTHO05D004956 4.0e-21 104.4 56 78.6
MD12G1011100 Malus domestica HOM05D000207 ORTHO05D004956 1.7e-19 99.0 69 68.1
VMungo0251G1197 Vigna mungo HOM05D000207 ORTHO05D004956 1.7e-19 99.0 44 100.0
Lj4g0019776 Lotus japonicus HOM05D000207 ORTHO05D004956 4.9e-19 97.4 48 89.6
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 4.6e-17 90.9 46 82.6
Lj4g0025571 Lotus japonicus HOM05D000207 ORTHO05D004956 6.6e-16 87.0 66 66.7
A09p67600 Brassica napus HOM05D000207 ORTHO05D004956 2.5e-15 85.1 41 90.2
Gohir.1Z049411 Gossypium hirsutum HOM05D000207 ORTHO05D004956 1.8e-13 79.0 35 100.0
Eucgr.L00218 Eucalyptus grandis HOM05D000207 ORTHO05D004956 3.2e-10 68.2 35 85.7
vmacro16885 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 4.1e-10 67.8 39 79.5
Ah.14g081440 Amaranthus hybridus HOM05D000207 ORTHO05D004956 4.3e-07 57.8 36 66.7
AagrBONN_evm.TU.Sc2ySwM_344.4872 Anthoceros agrestis HOM05D000170 ORTHO05D000159 2.8e-06 55.1 26 88.5


User provided reference genes

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