Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 4.9e-168 594.3 293 100.0
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 5.1e-157 557.8 295 92.9
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 1.1e-156 556.6 295 92.5
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 2.5e-148 528.9 295 88.8
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 4.3e-148 528.1 293 88.4
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 2.5e-143 512.3 292 84.9
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 8.7e-141 503.8 296 85.1
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 1.4e-135 486.5 323 76.5
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 1.4e-135 486.5 326 76.7
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 1.4e-125 453.4 295 75.6
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 1.1e-124 450.3 287 76.0
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 3.7e-123 445.3 293 75.1
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 9.1e-122 440.7 292 74.7
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 2.0e-121 439.5 293 74.7
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 2.0e-121 439.5 291 73.9
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 1.7e-120 436.4 293 73.4
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.8e-120 435.3 294 72.4
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 1.4e-119 433.3 293 72.4
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 1.4e-119 433.3 295 72.9
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.7e-118 429.1 291 70.8
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 1.0e-117 427.2 293 72.4
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 1.4e-117 426.8 291 70.8
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.9e-117 425.2 295 70.8
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 5.2e-117 424.9 292 70.9
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.1e-116 423.7 291 71.1
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 9.7e-116 420.6 294 70.4
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 4.8e-115 418.3 273 75.5
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 8.2e-115 417.5 293 67.9
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 1.1e-114 417.2 292 68.8
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.2e-113 413.7 298 68.8
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 2.6e-113 412.5 298 69.1
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 5.9e-113 411.4 298 67.8
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 7.7e-113 411.0 313 66.8
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 1.0e-112 410.6 298 67.4
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 1.0e-112 410.6 328 64.3
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.3e-112 410.2 313 66.5
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 1.7e-112 409.8 299 67.6
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 3.8e-112 408.7 297 68.4
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 8.5e-112 407.5 299 69.2
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 1.5e-111 406.8 299 68.6
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 1.9e-111 406.4 307 67.1
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 3.2e-111 405.6 300 68.0
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 9.4e-111 404.1 303 67.0
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 2.1e-110 402.9 298 67.4
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 3.6e-110 402.1 297 66.7
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 4.7e-110 401.7 295 66.8
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.7e-110 401.7 269 72.5
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 1.2e-108 397.1 294 69.0
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 2.0e-108 396.4 298 66.1
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 2.0e-108 396.4 291 68.4
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 2.6e-108 396.0 298 66.1
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 2.6e-108 396.0 293 68.9
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 4.4e-108 395.2 298 66.1
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 4.4e-108 395.2 294 68.0
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 4.4e-108 395.2 294 66.3
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 9.7e-108 394.0 298 66.1
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 2.2e-107 392.9 291 67.4
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 2.8e-107 392.5 299 65.2
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 1.4e-106 390.2 295 68.1
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 2.7e-105 386.0 294 66.3
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 3.5e-105 385.6 294 66.7
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 3.5e-105 385.6 294 65.6
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 7.7e-105 384.4 300 65.7
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 1.3e-104 383.6 293 67.6
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.2e-104 382.9 296 66.6
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 1.1e-103 380.6 295 65.8
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 1.2e-102 377.1 294 66.3
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 2.7e-102 375.9 294 66.0
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 3.6e-102 375.6 295 65.8
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 3.6e-102 375.6 295 64.7
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 3.0e-101 372.5 297 64.6
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 4.0e-101 372.1 294 65.3
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 6.8e-101 371.3 252 70.2
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 4.4e-100 368.6 296 64.5
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 5.7e-100 368.2 295 64.1
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 7.5e-100 367.9 302 61.6
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.8e-99 365.9 315 61.6
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.1e-98 364.0 280 66.1
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 2.4e-98 362.8 278 66.2
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 1.6e-97 360.1 241 73.0
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 4.5e-97 358.6 292 59.9
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 5.0e-96 355.1 284 64.8
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 2.5e-95 352.8 291 60.5
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 5.5e-95 351.7 278 66.2
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.6e-94 350.1 296 62.2
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 3.6e-94 349.0 298 59.4
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 9.5e-87 324.3 319 55.8
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.0e-85 320.9 206 72.8
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 6.8e-85 318.2 248 64.1
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 9.8e-84 314.3 252 63.9
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 1.1e-82 310.8 208 74.0
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 7.0e-82 308.1 247 64.4
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 3.5e-81 305.8 247 65.6
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 6.0e-81 305.1 298 54.0
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 7.8e-81 304.7 241 66.4
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 7.8e-81 304.7 238 66.8
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 1.9e-79 300.1 301 52.8
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 3.1e-77 292.7 262 59.9
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 4.0e-77 292.4 215 67.9
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 4.0e-77 292.4 175 81.1
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 1.9e-74 283.5 221 63.8
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 2.5e-71 273.1 161 82.0
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.3e-71 272.7 433 42.5
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.7e-67 260.4 312 48.4
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 4.9e-67 258.8 288 50.0
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.4e-66 257.3 248 55.6
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 5.1e-64 248.8 214 62.6
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 3.6e-62 242.7 173 70.5
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 1.8e-61 240.4 252 54.4
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 5.2e-61 238.8 238 56.3
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 8.9e-61 238.0 149 73.8
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 2.5e-55 219.9 185 61.1
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 1.8e-53 213.8 220 55.5
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 5.3e-53 212.2 122 84.4
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 5.3e-53 212.2 233 54.9
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 6.9e-53 211.8 111 87.4
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 6.4e-51 205.3 200 57.0
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 2.1e-41 173.7 129 65.1
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 9.6e-39 164.9 95 84.2
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 2.8e-38 163.3 285 37.5
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 3.8e-35 152.9 92 83.7
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.4e-34 151.0 96 72.9
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 2.5e-31 140.2 80 80.0
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 9.6e-31 138.3 335 31.0
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 2.0e-28 130.6 157 47.8
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 5.8e-28 129.0 70 85.7
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 5.0e-27 125.9 152 50.0
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 1.6e-25 120.9 244 32.8
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 2.7e-25 120.2 122 54.9
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 1.3e-24 117.9 133 45.1
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 7.7e-12 75.5 31 96.8
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 1.7e-11 74.3 101 45.5
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 5.5e-10 69.3 90 47.8
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.9e-08 63.2 55 56.4
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 6.7e-08 62.4 86 45.3


User provided reference genes

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