Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G054050 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 2.6e-74 282.0 140 100.0
Phvul.004G010600 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 4.1e-48 194.9 101 92.1
Glyma.05G004700 Glycine max HOM05D005494 ORTHO05D006689 3.0e-46 188.7 101 87.1
VMungo0464G1007 Vigna mungo HOM05D005494 ORTHO05D006689 2.1e-44 182.6 101 86.1
Glyma.04G177200 Glycine max HOM05D005494 ORTHO05D006689 3.6e-44 181.8 101 84.2
Glyma.06G187800 Glycine max HOM05D005494 ORTHO05D006689 5.2e-43 177.9 101 82.2
Lj1g0011553 Lotus japonicus HOM05D005494 ORTHO05D006689 1.1e-40 170.2 98 76.5
Ca_18065_v3 Cicer arietinum L. HOM05D005494 ORTHO05D006689 1.3e-38 163.3 101 75.2
Duzib084G0032 Durio zibethinus HOM05D005494 ORTHO05D006689 3.0e-38 162.2 102 72.5
Prupe.5G182300 Prunus persica HOM05D005494 ORTHO05D006689 1.1e-37 160.2 99 73.7
QL10p014050 Quercus lobata HOM05D005494 ORTHO05D006689 1.1e-37 160.2 98 71.4
Gohir.A12G174400 Gossypium hirsutum HOM05D005494 ORTHO05D006689 2.5e-37 159.1 98 71.4
Gohir.D12G177100 Gossypium hirsutum HOM05D005494 ORTHO05D006689 2.5e-37 159.1 98 71.4
Gorai.008G189500 Gossypium raimondii HOM05D005494 ORTHO05D006689 2.5e-37 159.1 98 71.4
COL.COLO4_07634 Corchorus olitorius HOM05D005494 ORTHO05D006689 5.6e-37 157.9 96 72.9
Dinv07986 Davidia involucrata HOM05D005494 ORTHO05D006689 5.6e-37 157.9 101 70.3
Cfa019036 Carpinus fangiana HOM05D005494 ORTHO05D006689 1.3e-36 156.8 99 68.7
Psat7g041440 Pisum sativum HOM05D005494 ORTHO05D006689 1.3e-36 156.8 101 73.3
Dinv13115 Davidia involucrata HOM05D005494 ORTHO05D006689 1.6e-36 156.4 98 69.4
Potri.012G073500 Populus trichocarpa HOM05D005494 ORTHO05D006689 2.8e-36 155.6 99 71.7
CSS0010415 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 6.2e-36 154.5 102 65.7
CSS0047784 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 6.2e-36 154.5 102 65.7
Sabra12G0052300 Salix brachista HOM05D005494 ORTHO05D006689 6.2e-36 154.5 99 71.7
Psat7g079600 Pisum sativum HOM05D005494 ORTHO05D006689 8.1e-36 154.1 101 71.3
Hma1.2p1_0572F.1_g181100 Hydrangea macrophylla HOM05D005494 ORTHO05D006689 1.8e-35 152.9 95 71.6
GSVIVG01008098001 Vitis vinifera HOM05D005494 ORTHO05D006689 3.1e-35 152.1 96 68.8
MSTRG.9655 Avicennia marina HOM05D005494 ORTHO05D006689 4.0e-35 151.8 103 67.0
Actinidia04945 Actinidia chinensis HOM05D005494 ORTHO05D006689 5.3e-35 151.4 98 66.3
Lalb_Chr08g0236101 Lupinus albus HOM05D005494 ORTHO05D006689 6.9e-35 151.0 102 70.6
TWI09G1329 Tripterygium wilfordii HOM05D005494 ORTHO05D006689 6.9e-35 151.0 102 67.6
arahy.Tifrunner.gnm1.ann1.QI1X69 Arachis hypogaea HOM05D005494 ORTHO05D006689 9.0e-35 150.6 105 67.6
Cpa.g.sc30.67 Carica papaya HOM05D005494 ORTHO05D006689 9.0e-35 150.6 102 63.7
RcHm_v2.0_Chr7g0180051 Rosa chinensis HOM05D005494 ORTHO05D006689 9.0e-35 150.6 98 71.4
Migut.D01889 Erythranthe guttata HOM05D005494 ORTHO05D006689 1.2e-34 150.2 100 67.0
Lj5C118G23 Lonicera japonica HOM05D005494 ORTHO05D006689 1.2e-34 150.2 98 67.3
Thecc.10G120900 Theobroma cacao HOM05D005494 ORTHO05D006689 1.5e-34 149.8 99 67.7
arahy.Tifrunner.gnm1.ann1.Y2W2NU Arachis hypogaea HOM05D005494 ORTHO05D006689 2.6e-34 149.1 98 71.4
Medtr8g080150 Medicago truncatula HOM05D005494 ORTHO05D006689 3.4e-34 148.7 96 69.8
CiPaw.11G034500 Carya illinoinensis HOM05D005494 ORTHO05D006689 7.6e-34 147.5 101 65.3
Migut.N01938 Erythranthe guttata HOM05D005494 ORTHO05D006689 7.6e-34 147.5 102 65.7
Peaxi162Scf00017g02118 Petunia axillaris HOM05D005494 ORTHO05D006689 9.9e-34 147.1 98 67.3
Sopen03g032650 Solanum pennellii HOM05D005494 ORTHO05D006689 9.9e-34 147.1 101 63.4
Nn3g17064 Nelumbo nucifera HOM05D005494 ORTHO05D006689 1.7e-33 146.4 100 66.0
SGA_v2.0_scaffold7G04099 Striga asiatica HOM05D005494 ORTHO05D006689 2.9e-33 145.6 96 65.6
Solyc03g113610.4 Solanum lycopersicum HOM05D005494 ORTHO05D006689 3.8e-33 145.2 101 62.4
MELO3C002226.2 Cucumis melo HOM05D005494 ORTHO05D006689 4.9e-33 144.8 103 65.0
DCAR_026093 Daucus carota HOM05D005494 ORTHO05D006689 4.9e-33 144.8 99 63.6
Ciclev10020622m.g Citrus clementina HOM05D005494 ORTHO05D006689 6.4e-33 144.4 101 64.4
Nitab4.5_0009486g0030 Nicotiana tabacum HOM05D005494 ORTHO05D006689 8.4e-33 144.1 98 64.3
FAN04G1682 Fragaria x ananassa HOM05D005494 ORTHO05D006689 1.1e-32 143.7 98 68.4
Oeu038310.1 Olea europaea HOM05D005494 ORTHO05D006689 1.1e-32 143.7 97 63.9
Manes.14G072100 Manihot esculenta HOM05D005494 ORTHO05D006689 1.4e-32 143.3 101 64.4
CANSAT80G2452 Cannabis sativa HOM05D005494 ORTHO05D006689 1.9e-32 142.9 96 68.8
Haze_07413 Corylus avellana HOM05D005494 ORTHO05D006689 1.9e-32 142.9 127 54.3
FvH4_5g16020 Fragaria vesca HOM05D005494 ORTHO05D006689 1.9e-32 142.9 98 68.4
FAN18G0952 Fragaria x ananassa HOM05D005494 ORTHO05D006689 1.9e-32 142.9 98 68.4
Nitab4.5_0000642g0180 Nicotiana tabacum HOM05D005494 ORTHO05D006689 1.9e-32 142.9 98 63.3
PGSC0003DMG400024571 Solanum tuberosum HOM05D005494 ORTHO05D006689 1.9e-32 142.9 98 63.3
TAR622G0530 Trochodendron aralioides HOM05D005494 ORTHO05D006689 1.9e-32 142.9 98 64.3
ClCG01G014230 Citrullus lanatus HOM05D005494 ORTHO05D006689 3.2e-32 142.1 104 62.5
CAN.G999.3 Capsicum annuum HOM05D005494 ORTHO05D006689 7.1e-32 141.0 101 62.4
AUR62022932 Chenopodium quinoa HOM05D005494 ORTHO05D006689 7.1e-32 141.0 96 66.7
CsaV3_1G008090 Cucumis sativus L. HOM05D005494 ORTHO05D006689 9.3e-32 140.6 103 63.1
Hund09389 Selenicereus undatus HOM05D005494 ORTHO05D006689 9.3e-32 140.6 100 66.0
Eucgr.B00382 Eucalyptus grandis HOM05D005494 ORTHO05D006689 1.2e-31 140.2 92 67.4
AUR62012293 Chenopodium quinoa HOM05D005494 ORTHO05D006689 2.1e-31 139.4 96 65.6
TAR629G2056 Trochodendron aralioides HOM05D005494 ORTHO05D006689 2.1e-31 139.4 98 61.2
Cc04_g16070 Coffea canephora HOM05D005494 ORTHO05D006689 3.5e-31 138.7 109 60.6
FAN13G0712 Fragaria x ananassa HOM05D005494 ORTHO05D006689 1.3e-30 136.7 94 68.1
Sed0009281 Sechium edule HOM05D005494 ORTHO05D006689 1.3e-30 136.7 94 66.0
SHI07761 Sapria himalayana HOM05D005494 ORTHO05D006689 1.8e-30 136.3 101 61.4
PSO591G0251 Papaver somniferum HOM05D005494 ORTHO05D006689 2.3e-30 136.0 104 60.6
AUR62021784 Chenopodium quinoa HOM05D005494 ORTHO05D006689 3.9e-30 135.2 96 64.6
Carub.0006s0951 Capsella rubella HOM05D005494 ORTHO05D006689 8.7e-30 134.0 104 60.6
AUR62008313 Chenopodium quinoa HOM05D005494 ORTHO05D006689 8.7e-30 134.0 96 64.6
Thhalv10000203m.g Eutrema salsugineum HOM05D005494 ORTHO05D006689 8.7e-30 134.0 104 60.6
EL10Ac5g10874 Beta vulgaris HOM05D005494 ORTHO05D006689 1.1e-29 133.7 96 63.5
Lsat_1_v5_gn_5_17360 Lactuca sativa HOM05D005494 ORTHO05D006689 1.1e-29 133.7 93 61.3
PSO832G2211 Papaver somniferum HOM05D005494 ORTHO05D006689 1.5e-29 133.3 111 57.7
Sp6g32480 Schrenkiella parvula HOM05D005494 ORTHO05D006689 1.5e-29 133.3 104 60.6
AT5G11010 Arabidopsis thaliana HOM05D005494 ORTHO05D006689 1.9e-29 132.9 104 59.6
TPR.G17080 Trifolium pratense HOM05D005494 ORTHO05D006689 1.9e-29 132.9 110 60.0
AL6G21610 Arabidopsis lyrata HOM05D005494 ORTHO05D006689 3.3e-29 132.1 104 59.6
Aqoxy3G03184 Aquilegia oxysepala HOM05D005494 ORTHO05D006689 4.3e-29 131.7 96 61.5
THA.LOC104818279 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 4.3e-29 131.7 104 56.7
CARHR202280 Cardamine hirsuta HOM05D005494 ORTHO05D006689 5.6e-29 131.3 104 59.6
Aa31LG3G16120 Aethionema arabicum HOM05D005494 ORTHO05D006689 9.6e-29 130.6 104 58.7
Oeu039559.2 Olea europaea HOM05D005494 ORTHO05D006689 9.6e-29 130.6 86 65.1
THA.LOC104814121 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 4.0e-27 125.2 104 52.9
C09p65840 Brassica napus HOM05D005494 ORTHO05D006689 7.6e-26 120.9 104 54.8
A10p26670 Brassica napus HOM05D005494 ORTHO05D006689 9.9e-26 120.6 104 54.8
Aa31LG10G14040 Aethionema arabicum HOM05D005494 ORTHO05D006689 6.4e-25 117.9 104 53.8
SEGI_00948 Sequoiadendron giganteum HOM05D005494 ORTHO05D006689 7.1e-24 114.4 92 54.3
ATR0051G026 Amborella trichopoda HOM05D004526 ORTHO05D005548 9.3e-24 114.0 110 51.8
HanXRQChr02g0045331 Helianthus annuus HOM05D005494 ORTHO05D006689 3.5e-23 112.1 108 49.1
Os01g0184000 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 7.9e-23 110.9 95 55.8
MD14G1189700 Malus domestica HOM05D005494 ORTHO05D006689 1.3e-22 110.2 138 44.2
Medtr8g080140 Medicago truncatula HOM05D005494 ORTHO05D006689 1.8e-22 109.8 101 55.4
Lsat_1_v5_gn_1_11340 Lactuca sativa HOM05D005494 ORTHO05D006689 3.0e-22 109.0 93 54.8
unitig_8.g3614 Utricularia gibba HOM05D005494 ORTHO05D006689 3.0e-22 109.0 89 55.1
Os01g0354700 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 5.1e-22 108.2 90 53.3
HanXRQChr16g0516751 Helianthus annuus HOM05D005494 ORTHO05D006689 1.1e-21 107.1 91 54.9
MD14G1057100 Malus domestica HOM05D005494 ORTHO05D006689 2.5e-21 105.9 77 63.6
Atru.chr9.2369 Acer truncatum HOM05D005494 ORTHO05D006689 3.3e-21 105.5 65 69.2
ECA247G2071 Erigeron canadensis HOM05D005494 ORTHO05D006689 3.3e-21 105.5 95 53.7
Zm00001eb121920 Zea mays HOM05D005494 ORTHO05D006689 3.3e-21 105.5 99 52.5
HPP92_008786 Vanilla planifolia HOM05D005494 ORTHO05D006689 1.3e-20 103.6 95 52.6
HPP92_006463 Vanilla planifolia HOM05D005494 ORTHO05D006689 3.7e-20 102.1 91 50.5
Rhsim08G0163400 Rhododendron simsii HOM05D005494 ORTHO05D006689 1.8e-19 99.8 140 41.4
GSVIVG01008101001 Vitis vinifera HOM05D005494 ORTHO05D006689 5.3e-19 98.2 63 71.4
Pp3c4_400 Physcomitrium patens HOM05D005494 ORTHO05D006689 2.9e-17 92.4 99 46.5
Mapoly0002s0051 Marchantia polymorpha HOM05D005494 ORTHO05D006689 3.2e-16 89.0 98 43.9
AagrBONN_evm.TU.Sc2ySwM_344.720 Anthoceros agrestis HOM05D005494 ORTHO05D006689 4.6e-15 85.1 91 46.2
CBR_g8796 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-15 85.1 98 44.9
BcaC04g19267 Brassica carinata HOM05D005494 ORTHO05D006689 1.8e-14 83.2 102 41.2
vmacro19338 Vaccinium macrocarpon HOM05D005494 ORTHO05D006689 5.7e-13 78.2 193 29.0
Lalb_Chr07g0182421 Lupinus albus HOM05D005494 ORTHO05D006689 7.4e-13 77.8 39 84.6
Lj4g0024662 Lotus japonicus HOM05D005494 ORTHO05D006689 9.6e-13 77.4 41 80.5
MD06G1183600 Malus domestica HOM05D005494 ORTHO05D006689 3.7e-12 75.5 103 38.8
Lalb_Chr07g0182431 Lupinus albus HOM05D005494 ORTHO05D006689 4.8e-12 75.1 58 58.6
BraA10t44725Z Brassica rapa HOM05D005494 ORTHO05D006689 6.3e-12 74.7 66 57.6
Atru.chr3.1308 Acer truncatum HOM05D005494 ORTHO05D006689 3.1e-11 72.4 61 60.7
QL06p038666 Quercus lobata HOM05D000045 ORTHO05D009425 4.1e-11 72.0 44 68.2
SGA_v2.0_scaffold114G31872 Striga asiatica HOM05D005494 ORTHO05D006689 2.5e-08 62.8 58 50.0


User provided reference genes

Program Settings