Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 7.0e-273 943.3 479 100.0
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 1.6e-237 825.9 480 88.8
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 5.5e-217 757.7 491 80.9
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 7.4e-214 747.3 494 79.8
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 3.8e-210 734.9 491 77.4
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 2.6e-206 722.2 492 76.0
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 5.7e-206 721.1 496 76.0
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 1.8e-204 716.1 497 75.3
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 7.0e-204 714.1 513 73.9
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 5.9e-203 711.1 497 74.8
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 1.1e-201 706.8 498 75.9
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 3.6e-200 701.8 496 74.0
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 1.4e-199 699.9 479 76.0
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 4.4e-198 694.9 501 74.5
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 3.1e-196 688.7 447 77.9
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 2.6e-195 685.6 438 77.6
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 1.7e-194 682.9 473 74.4
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 2.2e-194 682.6 432 78.2
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 3.2e-193 678.7 434 79.3
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 3.2e-193 678.7 432 78.0
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 3.2e-193 678.7 432 77.8
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 3.2e-193 678.7 487 71.7
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 5.5e-193 677.9 432 78.0
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 7.2e-193 677.6 432 77.5
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 2.3e-191 672.5 455 75.6
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 4.0e-191 671.8 457 74.8
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 4.0e-191 671.8 425 78.6
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 5.2e-191 671.4 481 72.1
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 1.2e-190 670.2 462 73.8
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 1.1e-188 663.7 457 74.0
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 2.4e-188 662.5 451 74.5
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 2.0e-187 659.4 434 76.7
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 7.7e-187 657.5 455 73.2
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 1.0e-186 657.1 444 73.6
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 1.0e-186 657.1 490 69.4
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 6.5e-186 654.4 432 73.8
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 6.5e-186 654.4 432 73.6
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 8.5e-186 654.1 497 68.8
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 3.2e-185 652.1 446 73.1
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 5.5e-185 651.4 430 73.7
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 2.1e-184 649.4 480 69.0
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 2.1e-184 649.4 489 69.3
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 4.7e-184 648.3 429 76.2
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 1.8e-183 646.4 511 67.7
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 1.2e-182 643.7 457 71.6
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 2.6e-182 642.5 479 69.1
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 3.4e-182 642.1 506 65.4
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 3.4e-182 642.1 431 73.8
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 4.4e-182 641.7 430 74.7
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.4e-182 641.7 441 73.5
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 7.5e-182 641.0 450 71.3
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 9.8e-182 640.6 485 68.2
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 2.2e-181 639.4 448 71.2
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 2.2e-181 639.4 492 67.5
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 3.7e-181 638.6 485 68.0
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 8.3e-181 637.5 473 68.5
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 1.4e-180 636.7 433 75.1
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 3.1e-180 635.6 435 73.8
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 3.1e-180 635.6 506 64.6
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 9.1e-180 634.0 435 72.4
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 9.1e-180 634.0 435 72.4
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 9.1e-180 634.0 433 72.7
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 9.1e-180 634.0 436 72.0
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 2.7e-179 632.5 433 73.0
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 4.5e-179 631.7 433 71.8
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 5.9e-179 631.3 433 72.3
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 7.7e-179 630.9 482 67.8
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 2.3e-178 629.4 473 67.7
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 2.3e-178 629.4 430 73.3
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 3.8e-178 628.6 480 68.1
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 5.0e-178 628.2 486 67.3
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 1.9e-177 626.3 433 71.6
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 9.5e-177 624.0 461 68.1
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 9.5e-177 624.0 485 66.2
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.2e-176 623.6 492 67.1
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 1.6e-176 623.2 474 67.3
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 2.8e-176 622.5 461 67.7
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 3.6e-176 622.1 446 69.5
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 3.6e-176 622.1 446 69.7
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 3.6e-176 622.1 429 72.3
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 1.0e-175 620.5 433 71.1
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 1.0e-175 620.5 433 71.1
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 3.0e-175 619.0 446 69.3
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 4.0e-175 618.6 461 67.5
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 3.4e-174 615.5 438 71.2
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 5.7e-174 614.8 438 70.1
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 1.3e-173 613.6 488 63.9
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 1.7e-173 613.2 511 63.8
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 2.2e-173 612.8 465 67.5
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 3.7e-173 612.1 442 70.1
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 6.3e-173 611.3 513 63.5
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 1.1e-172 610.5 465 67.1
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.4e-172 610.1 465 68.6
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 3.5e-171 605.5 497 62.6
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 2.3e-170 602.8 446 68.2
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 3.9e-170 602.1 504 62.9
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 3.9e-170 602.1 446 68.6
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 6.6e-170 601.3 442 69.2
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.1e-169 600.5 441 68.9
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 1.1e-169 600.5 446 68.6
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 1.1e-169 600.5 429 70.4
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 2.5e-169 599.4 447 68.7
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 5.8e-166 588.2 435 66.4
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 1.3e-162 577.0 428 66.1
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 1.7e-162 576.6 430 65.8
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 5.0e-162 575.1 449 63.9
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 8.6e-162 574.3 466 64.6
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 2.8e-152 542.7 475 61.5
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 2.4e-148 529.6 432 63.4
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 2.5e-145 519.6 373 69.7
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 1.1e-143 514.2 431 58.2
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 1.3e-141 507.3 429 63.4
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 6.4e-141 505.0 433 58.2
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 6.4e-141 505.0 325 76.9
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 4.6e-139 498.8 500 58.4
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.8e-136 488.8 483 56.1
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 6.4e-133 478.4 425 62.4
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 7.1e-132 474.9 497 51.1
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 8.1e-128 461.5 477 50.9
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.1e-108 397.9 332 63.9
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 3.9e-98 362.8 255 70.6
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 6.7e-82 308.9 400 46.0
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 5.9e-78 295.8 430 38.8
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 3.0e-74 283.5 246 59.8
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 2.8e-72 276.9 432 42.4
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 3.8e-69 266.5 210 63.3
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.6e-67 261.2 478 33.1
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 6.8e-66 255.8 234 60.3
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 2.0e-62 244.2 173 70.5
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 2.9e-61 240.4 337 46.0
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 1.2e-57 228.4 284 41.9
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.2e-49 201.8 167 65.3
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 1.2e-49 201.8 404 36.6
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 3.9e-37 160.2 112 69.6
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 2.8e-35 154.1 131 61.8
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.0e-34 150.2 96 74.0
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 7.1e-23 112.8 67 80.6
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 2.1e-22 111.3 79 68.4
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 1.8e-18 98.2 70 68.6
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 5.3e-18 96.7 107 53.3
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 1.5e-17 95.1 57 78.9
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 3.4e-17 94.0 59 78.0
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 3.9e-13 80.5 49 77.6
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 3.9e-13 80.5 49 77.6
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 3.9e-13 80.5 64 62.5
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 4.3e-12 77.0 85 50.6
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 5.6e-12 76.6 72 62.5


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