Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 7.0e-141 503.8 236 100.0
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 3.0e-139 498.4 236 98.3
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 2.6e-135 485.3 237 95.8
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 4.1e-133 478.0 237 94.5
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 1.5e-127 459.5 237 89.5
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 5.1e-123 444.5 239 88.3
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 1.5e-122 443.0 237 87.8
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 1.7e-118 429.5 236 84.3
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 1.9e-117 426.0 235 85.5
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 1.3e-115 419.9 238 82.8
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 1.9e-114 416.0 238 81.9
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 5.8e-103 377.9 245 73.1
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 8.4e-102 374.0 240 72.9
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 3.2e-101 372.1 232 74.1
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 1.2e-100 370.2 240 73.3
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 2.1e-100 369.4 226 75.2
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 1.0e-99 367.1 226 74.8
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 2.5e-98 362.5 228 72.8
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 4.3e-98 361.7 228 73.7
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 9.6e-98 360.5 246 70.3
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 3.7e-97 358.6 238 70.2
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 4.8e-97 358.2 238 71.0
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 8.1e-97 357.5 244 70.5
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 1.1e-96 357.1 222 75.2
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 1.4e-96 356.7 238 72.7
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 1.8e-96 356.3 237 69.2
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 2.4e-96 355.9 239 69.0
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 6.9e-96 354.4 230 73.5
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 6.9e-96 354.4 230 73.5
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 6.9e-96 354.4 230 73.5
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 1.2e-95 353.6 222 75.7
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 1.5e-95 353.2 239 68.2
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 1.5e-95 353.2 239 69.0
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 2.0e-95 352.8 235 69.8
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 2.6e-95 352.4 234 70.1
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 3.4e-95 352.1 238 70.6
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 4.5e-95 351.7 228 71.9
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 1.3e-94 350.1 239 70.3
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 2.2e-94 349.4 219 74.0
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 2.9e-94 349.0 237 69.6
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 8.4e-94 347.4 232 69.8
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 8.4e-94 347.4 219 74.9
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 8.4e-94 347.4 234 69.2
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 5.5e-93 344.7 234 69.2
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 1.6e-92 343.2 237 67.9
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 3.5e-92 342.0 225 67.1
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 3.5e-92 342.0 234 69.2
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 3.5e-92 342.0 249 65.5
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 3.5e-92 342.0 249 65.5
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 4.6e-92 341.7 235 68.1
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 1.0e-91 340.5 222 71.2
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 1.5e-90 336.7 232 68.1
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 2.5e-90 335.9 236 66.5
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 4.3e-90 335.1 230 67.4
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 4.3e-90 335.1 227 67.4
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 5.7e-90 334.7 224 67.9
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 9.6e-90 334.0 217 71.0
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 1.6e-89 333.2 224 68.3
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 2.8e-89 332.4 215 71.2
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 2.8e-89 332.4 222 67.6
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 4.8e-89 331.6 201 76.6
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 8.2e-89 330.9 222 69.4
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 8.2e-89 330.9 168 91.7
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.1e-88 330.5 232 66.8
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.8e-88 329.7 236 66.5
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 3.1e-88 328.9 236 65.7
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 3.1e-88 328.9 218 69.7
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 4.1e-88 328.6 225 65.3
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 6.9e-88 327.8 212 67.5
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 2.6e-87 325.9 238 63.9
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 2.9e-86 322.4 208 70.2
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 5.0e-86 321.6 221 69.7
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 8.4e-86 320.9 215 67.4
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 1.9e-85 319.7 211 69.2
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 1.2e-84 317.0 235 64.7
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 4.6e-84 315.1 262 59.2
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 6.1e-84 314.7 231 64.5
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 2.3e-83 312.8 205 70.2
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 6.7e-83 311.2 224 65.6
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 8.7e-83 310.8 227 63.4
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 1.5e-82 310.1 239 64.4
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 2.5e-82 309.3 228 64.0
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 4.3e-82 308.5 211 69.7
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 7.4e-82 307.8 216 65.3
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 9.7e-82 307.4 208 68.8
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 3.1e-72 275.8 200 63.0
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 2.6e-71 272.7 173 75.1
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 4.5e-71 271.9 169 75.7
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 9.4e-69 264.2 154 74.0
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.6e-68 263.5 163 71.8
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 2.1e-68 263.1 170 69.4
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 6.1e-68 261.5 239 59.0
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 8.8e-67 257.7 179 63.7
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 5.7e-66 255.0 162 66.0
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 7.0e-64 248.1 172 65.7
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.0e-62 244.2 170 69.4
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 3.6e-60 235.7 165 67.9
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 1.9e-53 213.4 291 39.5
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 2.6e-50 203.0 110 82.7
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 1.4e-48 197.2 250 41.6
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 3.1e-48 196.1 166 61.4
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 5.9e-47 191.8 224 45.5
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 1.9e-45 186.8 111 85.6
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 1.2e-42 177.6 114 73.7
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 2.8e-36 156.4 149 46.3
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 7.0e-32 141.7 186 40.3
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 1.7e-30 137.1 70 90.0
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 3.6e-28 129.4 98 56.1
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 2.9e-25 119.8 65 92.3
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 9.8e-18 94.7 70 60.0
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 2.9e-17 93.2 60 76.7
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.9e-16 90.5 118 40.7
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 5.4e-16 89.0 60 56.7
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 3.0e-14 83.2 118 40.7
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 3.1e-11 73.2 38 76.3
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 4.0e-11 72.8 166 31.9
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 1.2e-10 71.2 52 57.7
PRCOL_00002998 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 1.5e-10 70.9 170 31.8
PRCOL_00003886 Prasinoderma coloniale HOM05D006551 ORTHO05D044110 6.4e-09 65.5 181 29.3
Cfa024972 Carpinus fangiana HOM05D006551 ORTHO05D043702 1.6e-07 60.8 124 34.7
Psat1g141560 Pisum sativum HOM05D006551 ORTHO05D008546 2.7e-07 60.1 43 62.8


User provided reference genes

Program Settings