Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 5.5e-113 411.0 208 100.0
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 7.4e-110 400.6 208 98.1
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 3.6e-104 381.7 207 92.8
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 4.2e-97 358.2 208 86.5
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 5.9e-83 311.2 208 75.0
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 3.8e-82 308.5 209 73.2
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 8.5e-82 307.4 209 74.2
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 2.7e-80 302.4 208 70.7
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 1.5e-78 296.6 209 69.4
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 2.3e-71 272.7 209 67.9
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 3.5e-67 258.8 211 60.7
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 3.5e-67 258.8 211 63.0
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 4.5e-67 258.5 215 61.4
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 5.9e-67 258.1 211 59.7
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.3e-66 256.9 166 75.3
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 2.9e-66 255.8 209 58.9
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 5.0e-66 255.0 211 58.8
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 8.6e-66 254.2 209 59.8
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 1.5e-65 253.4 211 58.3
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 1.5e-65 253.4 210 58.6
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.9e-65 253.1 211 58.3
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 4.2e-65 251.9 210 57.1
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 7.2e-65 251.1 211 58.8
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 9.5e-65 250.8 211 56.9
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 9.5e-65 250.8 209 57.9
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 2.8e-64 249.2 211 58.3
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 3.6e-64 248.8 212 59.0
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 4.7e-64 248.4 211 59.2
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 4.7e-64 248.4 211 59.2
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 6.1e-64 248.1 211 56.9
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 6.1e-64 248.1 212 59.9
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 8.0e-64 247.7 212 57.5
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 1.8e-63 246.5 212 57.1
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 3.0e-63 245.7 211 57.8
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 4.0e-63 245.4 211 56.9
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 2.0e-62 243.0 211 57.8
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 2.6e-62 242.7 208 56.7
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 4.4e-62 241.9 211 55.9
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 4.4e-62 241.9 209 56.5
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 7.5e-62 241.1 217 55.8
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 2.8e-61 239.2 211 57.3
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 8.3e-61 237.7 211 55.9
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 3.1e-60 235.7 211 55.9
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 2.0e-59 233.0 211 56.9
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 2.0e-59 233.0 212 53.8
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 1.7e-58 229.9 211 52.1
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 2.3e-58 229.6 211 54.0
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 3.8e-58 228.8 206 53.9
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 1.5e-57 226.9 211 55.0
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 2.5e-57 226.1 175 63.4
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 3.3e-57 225.7 225 51.6
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 4.3e-57 225.3 211 52.1
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 4.3e-57 225.3 215 53.0
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 1.2e-56 223.8 190 56.8
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 1.2e-56 223.8 216 52.3
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.2e-56 223.8 216 52.3
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 2.8e-56 222.6 210 51.9
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 4.7e-56 221.9 206 53.9
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 4.7e-56 221.9 206 53.9
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 4.7e-56 221.9 207 54.1
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.0e-55 220.7 194 55.7
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.4e-55 220.3 211 51.2
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.4e-55 220.3 216 52.3
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 1.8e-55 219.9 208 53.8
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 1.8e-55 219.9 212 52.4
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.8e-55 219.9 206 53.4
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 1.8e-55 219.9 211 51.2
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 4.0e-55 218.8 211 50.7
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 4.0e-55 218.8 211 51.2
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 5.2e-55 218.4 211 54.0
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 6.8e-55 218.0 213 52.6
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 6.8e-55 218.0 211 52.1
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 8.9e-55 217.6 211 51.2
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 1.2e-54 217.2 213 51.6
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 1.2e-54 217.2 214 54.2
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 1.5e-54 216.9 213 53.1
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 1.5e-54 216.9 211 51.2
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 2.0e-54 216.5 209 54.1
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 2.6e-54 216.1 207 54.1
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 4.4e-54 215.3 211 50.7
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 7.5e-54 214.5 206 51.9
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 1.3e-53 213.8 211 50.7
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 1.3e-53 213.8 211 50.7
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.3e-53 213.8 213 50.2
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 3.7e-53 212.2 206 52.4
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 3.7e-53 212.2 209 51.2
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 3.7e-53 212.2 209 51.2
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 8.3e-53 211.1 165 63.6
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 3.2e-52 209.1 206 51.0
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 5.4e-52 208.4 218 49.1
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 6.6e-50 201.4 280 40.7
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 2.5e-49 199.5 166 55.4
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 4.4e-46 188.7 258 42.2
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 3.7e-45 185.7 166 53.6
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 3.9e-42 175.6 121 68.6
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.6e-40 170.2 117 67.5
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.1e-39 167.5 177 50.8
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 1.4e-39 167.2 171 48.0
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 6.8e-39 164.9 149 55.7
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 5.4e-36 155.2 129 56.6
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 9.2e-36 154.5 218 38.5
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 2.3e-34 149.8 249 34.5
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 4.3e-33 145.6 193 40.9
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 9.5e-33 144.4 142 53.5
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.6e-32 143.7 191 40.8
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.1e-27 126.7 210 31.4
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 5.1e-26 122.1 192 34.4
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 3.8e-21 105.9 97 52.6
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 4.2e-20 102.4 107 45.8
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 4.6e-19 99.0 107 55.1
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 9.6e-17 91.3 140 39.3
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 8.1e-16 88.2 90 48.9
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 1.2e-14 84.3 90 50.0
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 2.4e-12 76.6 99 34.3
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 7.1e-12 75.1 184 29.9
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.1e-09 67.8 98 31.6
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.1e-07 61.2 93 32.3
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 3.4e-06 56.2 57 36.8


User provided reference genes

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