Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 2.3e-134 482.3 247 100.0
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 1.8e-126 456.1 246 93.5
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 5.0e-113 411.4 250 83.6
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 5.1e-110 401.4 208 98.1
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 2.2e-97 359.4 248 74.2
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 9.4e-96 354.0 248 73.4
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 6.1e-95 351.3 248 71.8
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 2.2e-92 342.8 247 69.6
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 8.3e-92 340.9 248 69.0
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 2.0e-82 309.7 248 65.7
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.0e-81 307.4 204 75.5
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 1.8e-78 296.6 256 61.3
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 3.0e-78 295.8 251 62.2
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 4.0e-78 295.4 251 59.4
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 2.0e-77 293.1 251 58.6
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 3.2e-75 285.8 248 57.7
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 3.2e-75 285.8 249 56.6
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 3.2e-75 285.8 249 58.2
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 4.1e-75 285.4 243 58.0
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 7.0e-75 284.6 251 57.4
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 9.2e-75 284.3 251 57.8
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.2e-74 283.9 251 56.2
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 5.9e-74 281.6 249 56.2
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 7.8e-74 281.2 251 56.2
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 2.3e-73 279.6 251 57.0
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 3.9e-73 278.9 252 56.7
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 6.6e-73 278.1 238 58.8
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 6.6e-73 278.1 251 56.2
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 6.6e-73 278.1 251 57.0
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 8.6e-73 277.7 252 57.9
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 8.6e-73 277.7 252 57.9
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 8.6e-73 277.7 249 55.8
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 8.6e-73 277.7 252 56.3
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 2.5e-72 276.2 251 55.8
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 2.5e-72 276.2 248 55.6
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 4.3e-72 275.4 257 54.9
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.6e-71 273.5 251 56.6
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 2.0e-69 266.5 216 59.3
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 2.6e-69 266.2 253 53.8
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 2.6e-69 266.2 255 54.5
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.7e-68 263.5 251 55.0
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.7e-68 263.5 251 53.8
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 2.9e-68 262.7 255 53.3
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 4.9e-68 261.9 254 51.6
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 1.1e-67 260.8 250 51.6
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 1.9e-67 260.0 247 57.1
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 7.0e-67 258.1 246 54.5
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 7.0e-67 258.1 246 54.5
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 7.0e-67 258.1 254 52.4
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 2.7e-66 256.1 211 57.3
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 2.7e-66 256.1 265 50.9
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 4.6e-66 255.4 255 51.8
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 6.0e-66 255.0 252 51.6
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 7.8e-66 254.6 246 53.7
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 1.7e-65 253.4 251 54.6
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 1.7e-65 253.4 250 52.4
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 1.7e-65 253.4 212 60.4
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 1.7e-65 253.4 249 50.6
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 2.3e-65 253.1 251 53.8
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 3.0e-65 252.7 255 51.4
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 5.0e-65 251.9 247 53.8
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 6.6e-65 251.5 248 52.0
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 6.6e-65 251.5 250 52.4
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 1.1e-64 250.8 250 52.4
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.9e-64 250.0 255 51.4
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 2.5e-64 249.6 249 52.2
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 3.3e-64 249.2 250 52.0
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 4.3e-64 248.8 252 53.2
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 4.3e-64 248.8 252 52.0
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 9.5e-64 247.7 250 51.6
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 9.5e-64 247.7 250 51.6
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 9.5e-64 247.7 254 50.8
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 9.5e-64 247.7 251 51.0
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 2.8e-63 246.1 250 51.6
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 2.8e-63 246.1 250 51.6
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 3.6e-63 245.7 252 54.0
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 4.7e-63 245.4 245 52.2
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 6.2e-63 245.0 245 51.8
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 6.2e-63 245.0 248 53.2
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 8.1e-63 244.6 246 52.4
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 1.1e-62 244.2 247 52.6
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 1.8e-62 243.4 205 61.5
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 4.0e-62 242.3 241 51.0
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 4.0e-62 242.3 241 51.0
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 1.2e-61 240.7 257 50.2
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 1.5e-61 240.4 249 49.4
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 3.4e-61 239.2 246 50.8
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 2.9e-60 236.1 246 50.8
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 8.3e-60 234.6 240 48.8
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 4.1e-59 232.3 249 50.2
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.2e-58 230.7 321 41.7
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 2.6e-53 213.0 300 43.0
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 7.6e-53 211.5 206 52.4
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.3e-52 210.7 221 49.3
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 4.7e-47 192.2 188 54.3
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 3.1e-46 189.5 239 43.1
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 2.7e-42 176.4 121 68.6
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 6.6e-41 171.8 177 52.0
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 6.6e-41 171.8 245 37.6
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.1e-40 171.0 117 67.5
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 4.3e-40 169.1 182 51.1
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 3.8e-36 156.0 129 56.6
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 7.1e-35 151.8 233 37.8
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 6.0e-34 148.7 282 33.7
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 8.7e-33 144.8 191 41.4
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.4e-30 136.7 237 30.4
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 6.9e-30 135.2 146 54.8
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 6.4e-28 128.6 218 31.2
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 1.9e-27 127.1 131 51.9
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 6.0e-26 122.1 166 44.6
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 7.9e-26 121.7 147 44.2
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 1.5e-24 117.5 130 51.5
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.4e-19 100.9 97 50.5
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 7.6e-13 78.6 99 35.4
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 1.4e-11 74.3 220 27.3
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 3.5e-10 69.7 98 32.7
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 3.3e-08 63.2 93 33.3
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 1.1e-06 58.2 57 38.6
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 2.4e-06 57.0 82 39.0


User provided reference genes

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