Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G001900 Phaseolus vulgaris HOM05D001887 ORTHO05D006549 0.0e+00 1165.2 600 100.0
VMungo1215G0420 Vigna mungo HOM05D001887 ORTHO05D006549 3.2e-307 1057.7 594 92.6
Glyma.11G038500 Glycine max HOM05D001887 ORTHO05D006549 5.7e-296 1020.4 595 88.2
Ca_24613_v3 Cicer arietinum L. HOM05D001887 ORTHO05D006549 1.5e-275 952.6 638 78.5
Medtr5g013480 Medicago truncatula HOM05D001887 ORTHO05D006549 8.0e-274 946.8 595 81.3
Psat2g175720 Pisum sativum HOM05D001887 ORTHO05D006549 1.8e-273 945.7 595 81.0
Lalb_Chr09g0324141 Lupinus albus HOM05D001887 ORTHO05D006549 1.2e-272 943.0 595 82.5
Lj2g0012346 Lotus japonicus HOM05D001887 ORTHO05D006549 8.9e-265 916.8 595 80.7
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea HOM05D001887 ORTHO05D006549 1.6e-258 896.0 597 79.7
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea HOM05D001887 ORTHO05D006549 1.6e-258 896.0 597 79.7
Haze_08360 Corylus avellana HOM05D001887 ORTHO05D006549 5.6e-243 844.3 610 74.1
Cfa012332 Carpinus fangiana HOM05D001887 ORTHO05D006549 9.5e-243 843.6 603 74.0
CiPaw.11G072100 Carya illinoinensis HOM05D001887 ORTHO05D006549 7.1e-238 827.4 600 73.2
QL12p008620 Quercus lobata HOM05D001887 ORTHO05D006549 1.1e-235 820.1 598 73.2
TWI81G0509 Tripterygium wilfordii HOM05D001887 ORTHO05D006549 1.3e-228 796.6 609 70.3
Ciclev10024418m.g Citrus clementina HOM05D001887 ORTHO05D006549 1.7e-228 796.2 597 69.8
TAR636G0264 Trochodendron aralioides HOM05D001887 ORTHO05D006549 6.6e-228 794.3 601 70.9
Thecc.03G239300 Theobroma cacao HOM05D001887 ORTHO05D006549 2.8e-226 788.9 607 70.7
Prupe.5G054900 Prunus persica HOM05D001887 ORTHO05D006549 9.0e-225 783.9 655 66.7
Actinidia02198 Actinidia chinensis HOM05D001887 ORTHO05D006549 2.6e-224 782.3 602 70.1
CANSAT21G2194 Cannabis sativa HOM05D001887 ORTHO05D006549 2.6e-224 782.3 603 69.2
FvH4_5g20470 Fragaria vesca HOM05D001887 ORTHO05D006549 3.4e-224 781.9 654 65.7
Eucgr.E00349 Eucalyptus grandis HOM05D001887 ORTHO05D006549 7.6e-224 780.8 602 69.9
Rhsim07G0136100 Rhododendron simsii HOM05D001887 ORTHO05D006549 1.3e-223 780.0 601 70.9
RcHm_v2.0_Chr7g0205791 Rosa chinensis HOM05D001887 ORTHO05D006549 1.3e-223 780.0 654 65.7
COL.COLO4_06683 Corchorus olitorius HOM05D001887 ORTHO05D006549 1.4e-222 776.5 602 68.4
AUR62007171 Chenopodium quinoa HOM05D001887 ORTHO05D006549 3.2e-222 775.4 602 69.4
PGR042G1059 Punica granatum HOM05D001887 ORTHO05D006549 7.1e-222 774.2 596 67.8
FAN18G1605 Fragaria x ananassa HOM05D001887 ORTHO05D006549 9.3e-222 773.9 647 65.7
CSS0023599 Camellia sinensis var. sinensis HOM05D001887 ORTHO05D006549 1.6e-221 773.1 601 69.6
MD06G1046600 Malus domestica HOM05D001887 ORTHO05D006549 3.0e-220 768.8 677 64.7
Potri.001G150400 Populus trichocarpa HOM05D001887 ORTHO05D006549 5.6e-219 764.6 603 69.8
Gorai.004G191700 Gossypium raimondii HOM05D001887 ORTHO05D006549 7.3e-219 764.2 600 69.7
Manes.01G089700 Manihot esculenta HOM05D001887 ORTHO05D006549 7.3e-219 764.2 601 69.1
Hund14477 Selenicereus undatus HOM05D001887 ORTHO05D006549 2.8e-218 762.3 613 68.5
FAN13G0006 Fragaria x ananassa HOM05D001887 ORTHO05D006549 6.2e-218 761.1 658 65.3
ClCG09G012670 Citrullus lanatus HOM05D001887 ORTHO05D006549 2.4e-217 759.2 647 65.4
Gohir.D08G182700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 2.4e-217 759.2 600 69.2
GSVIVG01002051001 Vitis vinifera HOM05D001887 ORTHO05D006549 5.3e-217 758.1 597 69.3
CsaV3_3G049790 Cucumis sativus L. HOM05D001887 ORTHO05D006549 5.8e-216 754.6 641 65.5
vmacro00747 Vaccinium macrocarpon HOM05D001887 ORTHO05D006549 9.9e-216 753.8 604 69.0
Peaxi162Scf00301g00615 Petunia axillaris HOM05D001887 ORTHO05D006549 3.8e-215 751.9 596 68.0
Lj8C277T15 Lonicera japonica HOM05D001887 ORTHO05D006549 4.2e-214 748.4 596 68.5
Sed0013079 Sechium edule HOM05D001887 ORTHO05D006549 1.6e-213 746.5 641 65.1
Aqoxy7G00853 Aquilegia oxysepala HOM05D001887 ORTHO05D006549 6.7e-212 741.1 593 67.3
HanXRQChr01g0016001 Helianthus annuus HOM05D001887 ORTHO05D006549 2.1e-210 736.1 597 67.0
MELO3C003338.2 Cucumis melo HOM05D001887 ORTHO05D006549 4.8e-210 734.9 634 64.7
Nitab4.5_0004227g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 2.4e-209 732.6 596 66.6
CARHR213220 Cardamine hirsuta HOM05D001887 ORTHO05D006549 6.9e-209 731.1 607 64.7
Sopen08g026310 Solanum pennellii HOM05D001887 ORTHO05D006549 1.2e-208 730.3 596 67.8
PGSC0003DMG400026214 Solanum tuberosum HOM05D001887 ORTHO05D006549 2.6e-208 729.2 595 67.4
Aa31LG9G15130 Aethionema arabicum HOM05D001887 ORTHO05D006549 9.9e-208 727.2 567 67.5
Ah.07g199260 Amaranthus hybridus HOM05D001887 ORTHO05D006549 2.2e-207 726.1 599 66.1
BraA04t17079Z Brassica rapa HOM05D001887 ORTHO05D006549 2.2e-207 726.1 598 64.4
Nn1g00744 Nelumbo nucifera HOM05D001887 ORTHO05D006549 2.2e-207 726.1 624 65.5
THA.LOC104807928 Tarenaya hassleriana HOM05D001887 ORTHO05D006549 2.2e-207 726.1 596 65.8
Thhalv10027633m.g Eutrema salsugineum HOM05D001887 ORTHO05D006549 2.9e-207 725.7 599 64.9
Solyc08g077800.4 Solanum lycopersicum HOM05D001887 ORTHO05D006549 2.9e-207 725.7 605 66.3
Cc08_g11250 Coffea canephora HOM05D001887 ORTHO05D006549 4.9e-207 724.9 593 66.1
BcaC02g08980 Brassica carinata HOM05D001887 ORTHO05D006549 8.4e-207 724.2 597 64.3
C04p48230 Brassica napus HOM05D001887 ORTHO05D006549 8.4e-207 724.2 597 64.3
BolC4t26415H Brassica oleracea HOM05D001887 ORTHO05D006549 8.4e-207 724.2 597 64.3
AL7G48280 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 2.4e-206 722.6 607 64.7
CAN.G572.14 Capsicum annuum HOM05D001887 ORTHO05D006549 2.4e-206 722.6 601 67.1
BcaB06g27602 Brassica carinata HOM05D001887 ORTHO05D006549 5.5e-206 721.5 597 64.3
A04p14190 Brassica napus HOM05D001887 ORTHO05D006549 5.5e-206 721.5 598 64.2
MBI04_g38561_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 9.3e-206 720.7 627 63.2
Sp7g00750 Schrenkiella parvula HOM05D001887 ORTHO05D006549 9.3e-206 720.7 595 63.7
SpUn0010_0230 Schrenkiella parvula HOM05D001887 ORTHO05D006549 9.3e-206 720.7 595 63.7
Nitab4.5_0003335g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 1.2e-205 720.3 597 66.3
Carub.0007s3432 Capsella rubella HOM05D001887 ORTHO05D006549 1.6e-205 719.9 597 64.7
Duzib205G1274 Durio zibethinus HOM05D001887 ORTHO05D006549 3.5e-205 718.8 581 67.6
EL10Ac5g12260 Beta vulgaris HOM05D001887 ORTHO05D006549 4.6e-205 718.4 650 62.9
AL7G48350 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 7.9e-205 717.6 599 64.6
Sabra01G0120200 Salix brachista HOM05D001887 ORTHO05D006549 4.3e-203 711.8 553 71.2
AT5G41150 Arabidopsis thaliana HOM05D001887 ORTHO05D006549 9.6e-203 710.7 603 64.3
PSO675G3297 Papaver somniferum HOM05D001887 ORTHO05D006549 9.0e-201 704.1 602 64.1
ECA246G2103 Erigeron canadensis HOM05D001887 ORTHO05D006549 1.2e-200 703.7 596 65.4
Migut.E01262 Erythranthe guttata HOM05D001887 ORTHO05D006549 1.5e-200 703.4 595 64.9
Migut.E01632 Erythranthe guttata HOM05D001887 ORTHO05D006549 1.5e-200 703.4 595 64.9
SGA_v2.0_scaffold6G03161 Striga asiatica HOM05D001887 ORTHO05D006549 5.5e-198 694.9 612 64.1
Zm00001eb208390 Zea mays HOM05D001887 ORTHO05D006549 7.1e-198 694.5 594 62.8
CDE02G0676 Ceratophyllum demersum HOM05D001887 ORTHO05D006549 3.5e-197 692.2 580 65.9
ATR0665G232 Amborella trichopoda HOM05D001887 ORTHO05D006549 1.8e-196 689.9 592 64.4
DCAR_000656 Daucus carota HOM05D001887 ORTHO05D006549 3.1e-193 679.1 597 61.3
AUR62018833 Chenopodium quinoa HOM05D001887 ORTHO05D006549 3.4e-192 675.6 596 63.6
Lsat_1_v5_gn_3_15381 Lactuca sativa HOM05D001887 ORTHO05D006549 1.0e-191 674.1 627 60.9
Os03g0100400 Oryza sativa ssp. japonica HOM05D001887 ORTHO05D006549 5.0e-191 671.8 597 61.5
unitig_699.g19770 Utricularia gibba HOM05D001887 ORTHO05D006549 1.7e-183 646.7 605 60.2
HPP92_001389 Vanilla planifolia HOM05D001887 ORTHO05D006549 5.7e-179 631.7 599 56.3
Gohir.A08G162700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 3.7e-178 629.0 527 66.0
SEGI_01687 Sequoiadendron giganteum HOM05D001887 ORTHO05D006549 3.5e-168 595.9 560 59.3
Mapoly0007s0092 Marchantia polymorpha HOM05D001887 ORTHO05D006549 7.0e-161 571.6 621 52.7
Pp3c18_11670 Physcomitrium patens HOM05D001887 ORTHO05D006549 6.1e-157 558.5 618 52.1
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis HOM05D001887 ORTHO05D006549 3.7e-154 549.3 608 51.5
SMO118G0017 Selaginella moellendorffii HOM05D001887 ORTHO05D006549 3.7e-154 549.3 604 52.5
Dinv25138 Davidia involucrata HOM05D001887 ORTHO05D006549 1.4e-153 547.4 457 66.1
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla HOM05D001887 ORTHO05D006549 1.5e-150 537.3 610 53.1
MSTRG.13777 Avicennia marina HOM05D001887 ORTHO05D006549 1.3e-138 497.7 595 50.4
CBR_g39228 Chara braunii HOM05D001887 ORTHO05D006549 5.2e-132 475.7 364 65.9
Oeu028057.3 Olea europaea HOM05D001887 ORTHO05D006549 9.8e-131 471.5 594 49.2
TPR.G31432 Trifolium pratense HOM05D001887 ORTHO05D006549 4.9e-130 469.2 277 87.0
Cpa.g.c28699.1 Carica papaya HOM05D001887 ORTHO05D006549 1.2e-125 454.5 266 86.8
SalBow1G0188 Salvia bowleyana HOM05D001887 ORTHO05D006549 1.7e-122 444.1 270 81.5
HPP92_012638 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.9e-121 440.7 305 70.2
MBI04_g36289_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 1.8e-100 370.9 591 42.0
Sc01g0007960 Simmondsia chinensis HOM05D001887 ORTHO05D006549 9.3e-97 358.6 367 55.3
Cre06.g311400 Chlamydomonas reinhardtii HOM05D001887 ORTHO05D006549 8.7e-79 298.9 403 43.7
MCO16G346 Micromonas commoda HOM05D001887 ORTHO05D006549 2.9e-74 283.9 356 41.9
GSVIVG01002647001 Vitis vinifera HOM05D001887 ORTHO05D006549 2.0e-70 271.2 145 93.8
SalBow1G4075 Salvia bowleyana HOM05D001887 ORTHO05D006549 6.9e-68 262.7 347 46.1
Cfa026920 Carpinus fangiana HOM05D001887 ORTHO05D006549 1.8e-63 248.1 611 31.8
TPR.G31429 Trifolium pratense HOM05D001887 ORTHO05D006549 3.7e-61 240.4 285 50.9
PRCOL_00000830 Prasinoderma coloniale HOM05D001887 ORTHO05D006549 7.0e-60 236.1 415 36.9
HPP92_000025 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.5e-57 228.4 144 75.0
Atru.chr9.1202 Acer truncatum HOM05D001887 ORTHO05D006549 4.7e-56 223.4 150 76.7
Glyma.01G204533 Glycine max HOM05D001887 ORTHO05D006549 7.7e-51 206.1 105 99.0
HPP92_028027 Vanilla planifolia HOM05D001887 ORTHO05D006549 8.5e-50 202.6 129 74.4
Sed0025805 Sechium edule HOM05D001887 ORTHO05D006549 1.6e-48 198.4 214 55.6
HPP92_002782 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.7e-48 197.6 129 72.9
Atru.chr9.1201 Acer truncatum HOM05D001887 ORTHO05D006549 1.6e-43 181.8 226 47.8
Atru.chr9.1203 Acer truncatum HOM05D001887 ORTHO05D006549 2.0e-43 181.4 98 90.8
HPP92_028028 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.9e-42 177.6 131 66.4
MD04G1054800 Malus domestica HOM05D001887 ORTHO05D006549 1.2e-40 172.2 123 74.0
AagrBONN_evm.TU.Sc2ySwM_362.220 Anthoceros agrestis HOM05D001887 ORTHO05D006549 1.2e-27 129.0 85 69.4
HPP92_013056 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.9e-17 95.1 122 41.8
AagrBONN_evm.TU.Sc2ySwM_362.221 Anthoceros agrestis HOM05D001887 ORTHO05D070959 2.6e-06 58.2 45 62.2


User provided reference genes

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