Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 3.5e-140 501.5 235 100.0
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 3.3e-114 415.2 243 81.9
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 4.3e-114 414.8 243 81.9
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 8.1e-113 410.6 250 80.0
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 6.6e-107 391.0 250 77.6
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 1.9e-101 372.9 193 88.6
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 8.7e-91 337.4 231 66.7
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 1.1e-90 337.0 206 72.3
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 2.5e-90 335.9 231 66.2
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 2.5e-90 335.9 211 74.9
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 3.3e-90 335.5 236 65.7
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 7.4e-90 334.3 233 66.5
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 1.3e-89 333.6 241 66.8
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 1.3e-89 333.6 241 66.8
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 2.8e-89 332.4 208 72.6
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 6.2e-89 331.3 206 72.3
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 1.8e-88 329.7 223 65.9
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 1.8e-88 329.7 207 70.5
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 4.0e-88 328.6 234 64.5
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 9.0e-88 327.4 207 71.0
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 3.4e-87 325.5 206 71.4
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 4.5e-87 325.1 233 64.8
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 1.3e-86 323.6 234 64.1
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 1.3e-86 323.6 207 71.5
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 1.7e-86 323.2 214 68.7
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 2.9e-86 322.4 204 72.1
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 1.1e-85 320.5 189 79.9
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 1.1e-85 320.5 235 64.3
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 1.4e-85 320.1 202 73.8
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 1.9e-85 319.7 212 68.9
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 2.4e-85 319.3 234 62.8
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 5.5e-85 318.2 231 65.4
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 7.1e-85 317.8 231 65.4
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 7.1e-85 317.8 230 66.1
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 9.3e-85 317.4 234 65.4
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 9.3e-85 317.4 220 69.1
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 1.2e-84 317.0 204 70.1
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 1.2e-84 317.0 205 68.8
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 2.7e-84 315.8 232 64.2
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 4.6e-84 315.1 207 69.6
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 6.0e-84 314.7 246 62.2
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 7.9e-84 314.3 230 64.8
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 7.9e-84 314.3 231 64.5
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 1.8e-83 313.2 233 63.5
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 3.0e-83 312.4 231 64.5
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 3.9e-83 312.0 209 68.4
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 5.1e-83 311.6 206 69.4
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 5.1e-83 311.6 203 70.9
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 6.7e-83 311.2 220 66.4
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 8.7e-83 310.8 220 66.4
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 1.1e-82 310.5 207 68.1
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 1.1e-82 310.5 200 70.0
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 3.3e-82 308.9 233 63.9
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 5.6e-82 308.1 233 63.9
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 7.4e-82 307.8 211 66.4
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 7.4e-82 307.8 192 70.8
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 1.3e-81 307.0 220 65.5
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 1.3e-81 307.0 220 65.5
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 1.3e-81 307.0 220 65.5
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.6e-81 306.6 233 63.9
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 1.6e-81 306.6 231 62.3
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 2.1e-81 306.2 207 66.7
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 2.1e-81 306.2 209 67.9
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 2.1e-81 306.2 208 67.3
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 2.8e-81 305.8 205 67.3
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 1.1e-80 303.9 218 63.8
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 1.4e-80 303.5 182 74.7
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 2.4e-80 302.8 206 67.5
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 5.3e-80 301.6 206 65.5
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 9.0e-80 300.8 231 62.3
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 2.6e-79 299.3 205 67.8
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 5.8e-79 298.1 207 66.2
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 5.8e-79 298.1 242 60.3
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 1.3e-78 297.0 205 67.3
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 1.7e-78 296.6 204 66.2
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 1.7e-78 296.6 211 66.4
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 3.8e-78 295.4 209 66.0
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 3.8e-78 295.4 203 66.0
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 1.4e-77 293.5 228 63.2
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 3.2e-77 292.4 206 63.1
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 4.2e-77 292.0 207 65.7
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 3.5e-76 288.9 202 63.9
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 7.9e-76 287.7 206 61.7
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 8.7e-75 284.3 224 60.7
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 3.3e-74 282.3 206 62.1
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 9.6e-74 280.8 192 68.8
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 6.1e-68 261.5 159 76.7
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 3.9e-67 258.8 184 63.6
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 5.1e-67 258.5 147 76.2
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 1.5e-66 256.9 158 75.3
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 1.1e-64 250.8 165 66.7
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 1.0e-62 244.2 156 73.1
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 1.3e-62 243.8 169 63.3
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 2.9e-62 242.7 150 68.7
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 4.6e-60 235.3 158 69.0
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 1.5e-58 230.3 162 71.0
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 2.0e-58 229.9 234 51.3
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 9.7e-58 227.6 153 68.0
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 4.4e-50 202.2 278 39.2
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 4.8e-49 198.7 242 40.5
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 1.5e-42 177.2 211 44.5
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 4.8e-41 172.2 114 72.8
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 2.2e-33 146.7 145 44.8
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 1.7e-30 137.1 134 47.0
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 1.1e-29 134.4 119 52.1
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 1.4e-27 127.5 188 37.8
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 4.0e-27 125.9 101 63.4
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 6.4e-17 92.0 96 55.2
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 3.9e-14 82.8 101 40.6
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 1.0e-11 74.7 51 54.9
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.8e-11 73.9 49 73.5
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 2.3e-11 73.6 101 36.6
PRCOL_00003886 Prasinoderma coloniale HOM05D006551 ORTHO05D044110 1.5e-10 70.9 165 30.3
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 2.0e-10 70.5 48 72.9
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 2.2e-09 67.0 51 49.0
Cfa024972 Carpinus fangiana HOM05D006551 ORTHO05D043702 1.9e-08 63.9 114 37.7
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 2.4e-08 63.5 51 51.0
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 1.2e-07 61.2 143 32.9
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 2.0e-07 60.5 46 50.0
PRCOL_00002998 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 6.0e-07 58.9 133 30.1


User provided reference genes

Program Settings