Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G4509 Papaver somniferum HOM05D004569 ORTHO05D005333 2.7e-93 345.5 198 100.0
PSO210G1425 Papaver somniferum HOM05D004569 ORTHO05D005333 5.5e-70 268.1 141 97.2
TAR365G0299 Trochodendron aralioides HOM05D004569 ORTHO05D005333 5.5e-46 188.3 146 65.1
Nn1g01867 Nelumbo nucifera HOM05D004569 ORTHO05D005333 1.2e-45 187.2 142 66.2
Aqoxy5G00407 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 1.3e-42 177.2 125 67.2
Duzib052G0452 Durio zibethinus HOM05D004569 ORTHO05D005333 8.2e-42 174.5 129 67.4
Thecc.04G238000 Theobroma cacao HOM05D004569 ORTHO05D005333 1.8e-41 173.3 170 55.3
Duzib052G0972 Durio zibethinus HOM05D004569 ORTHO05D005333 6.9e-41 171.4 129 66.7
CiPaw.01G195800 Carya illinoinensis HOM05D004569 ORTHO05D005333 2.6e-40 169.5 157 61.1
CANSAT78G0168 Cannabis sativa HOM05D004569 ORTHO05D005333 5.0e-39 165.2 130 65.4
Gorai.005G045300 Gossypium raimondii HOM05D004569 ORTHO05D005333 5.0e-39 165.2 119 68.9
Gohir.A02G034100 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.1e-38 164.1 171 54.4
Lalb_Chr06g0161741 Lupinus albus HOM05D004569 ORTHO05D005333 1.4e-38 163.7 133 63.9
Gohir.D02G040900 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.9e-38 163.3 170 53.5
GSVIVG01036653001 Vitis vinifera HOM05D004569 ORTHO05D005333 1.9e-38 163.3 119 67.2
Dinv07545 Davidia involucrata HOM05D004569 ORTHO05D005333 2.5e-38 162.9 130 62.3
Lj6g0017152 Lotus japonicus HOM05D004569 ORTHO05D005333 3.2e-38 162.5 145 58.6
Manes.02G208200 Manihot esculenta HOM05D004569 ORTHO05D005333 4.2e-38 162.2 129 65.9
Cfa006984 Carpinus fangiana HOM05D004569 ORTHO05D005333 7.2e-38 161.4 130 63.8
Ciclev10006087m.g Citrus clementina HOM05D004569 ORTHO05D005333 1.2e-37 160.6 154 53.2
Potri.005G067600 Populus trichocarpa HOM05D004569 ORTHO05D005333 1.6e-37 160.2 135 65.2
Phvul.001G230900 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 2.7e-37 159.5 123 64.2
Rhsim01G0189100 Rhododendron simsii HOM05D004569 ORTHO05D005333 7.9e-37 157.9 130 62.3
Hund09493 Selenicereus undatus HOM05D004569 ORTHO05D005333 7.9e-37 157.9 138 59.4
CSS0021073 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.4e-36 157.1 142 58.5
Haze_03750 Corylus avellana HOM05D004569 ORTHO05D005333 1.8e-36 156.8 130 60.8
arahy.Tifrunner.gnm1.ann1.NDW3GA Arachis hypogaea HOM05D004569 ORTHO05D005333 8.8e-36 154.5 148 58.1
arahy.Tifrunner.gnm1.ann1.SFA2KC Arachis hypogaea HOM05D004569 ORTHO05D005333 2.0e-35 153.3 129 61.2
MBI18_g09782_MAGBIO Magnolia biondii HOM05D004569 ORTHO05D005333 4.4e-35 152.1 136 53.7
Nitab4.5_0000321g0230 Nicotiana tabacum HOM05D004569 ORTHO05D005333 5.7e-35 151.8 153 55.6
Peaxi162Scf00192g01617 Petunia axillaris HOM05D004569 ORTHO05D005333 9.7e-35 151.0 132 61.4
VMungo1383G1439 Vigna mungo HOM05D004569 ORTHO05D005333 9.7e-35 151.0 128 60.9
CSS0011446 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.3e-34 150.6 127 63.0
Nitab4.5_0004412g0030 Nicotiana tabacum HOM05D004569 ORTHO05D005333 1.3e-34 150.6 150 56.0
Rhsim04G0197700 Rhododendron simsii HOM05D004569 ORTHO05D005333 2.8e-34 149.4 139 59.0
ECA246G0155 Erigeron canadensis HOM05D004569 ORTHO05D005333 4.8e-34 148.7 129 59.7
HanXRQChr06g0173001 Helianthus annuus HOM05D004569 ORTHO05D005333 4.8e-34 148.7 138 55.1
CSS0049273 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 8.2e-34 147.9 139 58.3
VMungo1383G2501 Vigna mungo HOM05D004569 ORTHO05D005333 1.1e-33 147.5 135 58.5
Glyma.18G039600 Glycine max HOM05D004569 ORTHO05D005333 2.4e-33 146.4 121 62.8
Glyma.11G217000 Glycine max HOM05D004569 ORTHO05D005333 3.1e-33 146.0 121 62.8
Aa31LG11G680 Aethionema arabicum HOM05D004569 ORTHO05D005333 9.1e-33 144.4 131 58.0
Atru.chr4.2374 Acer truncatum HOM05D004569 ORTHO05D005333 1.2e-32 144.1 164 48.8
CARHR276760 Cardamine hirsuta HOM05D004569 ORTHO05D005333 1.2e-32 144.1 148 54.7
Lj5g0008299 Lotus japonicus HOM05D004569 ORTHO05D005333 1.2e-32 144.1 146 53.4
HanXRQChr05g0158611 Helianthus annuus HOM05D004569 ORTHO05D005333 1.6e-32 143.7 119 61.3
THA.LOC104827037 Tarenaya hassleriana HOM05D004569 ORTHO05D005333 2.0e-32 143.3 138 56.5
AT5G62950 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 4.5e-32 142.1 134 59.0
CDE05G0131 Ceratophyllum demersum HOM05D004569 ORTHO05D005333 4.5e-32 142.1 126 58.7
Sc19g0003960 Simmondsia chinensis HOM05D004569 ORTHO05D005333 4.5e-32 142.1 161 51.6
Carub.0004s0755 Capsella rubella HOM05D004569 ORTHO05D005333 5.9e-32 141.7 137 56.2
Thhalv10005100m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 5.9e-32 141.7 134 57.5
CAN.G135.33 Capsicum annuum HOM05D004569 ORTHO05D005333 7.7e-32 141.4 161 51.6
Oeu042815.1 Olea europaea HOM05D004569 ORTHO05D005333 7.7e-32 141.4 144 52.1
vmacro17995 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 7.7e-32 141.4 130 54.6
MD13G1198900 Malus domestica HOM05D004569 ORTHO05D005333 1.3e-31 140.6 152 48.0
SGA_v2.0_scaffold45G17132 Striga asiatica HOM05D004044 ORTHO05D005333 1.7e-31 140.2 120 57.5
Prupe.1G020700 Prunus persica HOM05D004569 ORTHO05D005333 2.2e-31 139.8 163 52.1
Medtr7g034585 Medicago truncatula HOM05D004569 ORTHO05D005333 3.8e-31 139.0 134 52.2
TWI63G1720 Tripterygium wilfordii HOM05D004569 ORTHO05D005333 3.8e-31 139.0 165 50.9
AUR62028629 Chenopodium quinoa HOM05D004569 ORTHO05D005333 5.0e-31 138.7 167 45.5
ClCG06G006470 Citrullus lanatus HOM05D004569 ORTHO05D005333 1.1e-30 137.5 155 49.7
Lsat_1_v5_gn_1_12980 Lactuca sativa HOM05D004569 ORTHO05D005333 1.1e-30 137.5 129 53.5
Oeu058961.1 Olea europaea HOM05D004569 ORTHO05D005333 2.5e-30 136.3 129 52.7
Ca_17658_v3 Cicer arietinum L. HOM05D004569 ORTHO05D005333 4.2e-30 135.6 152 50.0
Sed0021164 Sechium edule HOM05D004569 ORTHO05D005333 4.2e-30 135.6 153 51.6
AL8G39970 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 5.5e-30 135.2 148 52.7
Carub.0008s2366 Capsella rubella HOM05D004569 ORTHO05D005333 7.2e-30 134.8 132 53.0
Thhalv10000370m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 9.4e-30 134.4 129 57.4
Ah.02g110960 Amaranthus hybridus HOM05D000936 ORTHO05D001411 1.2e-29 134.0 136 50.0
AL3G51140 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 1.2e-29 134.0 148 52.7
Peaxi162Scf00904g00217 Petunia axillaris HOM05D004569 ORTHO05D005333 2.1e-29 133.3 151 51.7
Sp2g26090 Schrenkiella parvula HOM05D004569 ORTHO05D005333 2.1e-29 133.3 146 52.7
SGA_v2.0_scaffold353G49718 Striga asiatica HOM05D004569 ORTHO05D005333 2.1e-29 133.3 122 56.6
SalBow8G0974 Salvia bowleyana HOM05D004569 ORTHO05D005333 3.6e-29 132.5 132 53.0
Psat3g163880 Pisum sativum HOM05D004569 ORTHO05D005333 4.7e-29 132.1 173 43.9
CsaV3_2G013430 Cucumis sativus L. HOM05D004569 ORTHO05D005333 6.1e-29 131.7 170 48.2
A09p07940 Brassica napus HOM05D004569 ORTHO05D005333 8.0e-29 131.3 132 56.1
PGR004G1818 Punica granatum HOM05D004569 ORTHO05D005333 1.0e-28 131.0 166 47.6
SalBow2G1663 Salvia bowleyana HOM05D004569 ORTHO05D005333 1.0e-28 131.0 135 51.9
Cc03_g04240 Coffea canephora HOM05D004569 ORTHO05D005333 1.8e-28 130.2 163 46.6
PGR031G3247 Punica granatum HOM05D004569 ORTHO05D005333 3.0e-28 129.4 153 48.4
BcaB04g19957 Brassica carinata HOM05D004569 ORTHO05D005333 4.0e-28 129.0 131 55.0
BcaC04g23378 Brassica carinata HOM05D004569 ORTHO05D005333 5.2e-28 128.6 128 54.7
C09p08990 Brassica napus HOM05D004569 ORTHO05D005333 5.2e-28 128.6 128 55.5
BolC9t53811H Brassica oleracea HOM05D004569 ORTHO05D005333 5.2e-28 128.6 128 55.5
BraA09t36445Z Brassica rapa HOM05D004569 ORTHO05D005333 5.2e-28 128.6 131 55.7
Nitab4.5_0004743g0130 Nicotiana tabacum HOM05D004569 ORTHO05D005333 5.2e-28 128.6 132 57.6
Zm00001eb076270 Zea mays HOM05D004569 ORTHO05D005333 6.7e-28 128.3 147 46.3
C02p62490 Brassica napus HOM05D004569 ORTHO05D005333 1.1e-27 127.5 129 55.8
BolC2t12308H Brassica oleracea HOM05D004569 ORTHO05D005333 1.1e-27 127.5 129 55.8
Dinv40544 Davidia involucrata HOM05D004569 ORTHO05D005333 1.1e-27 127.5 88 69.3
Sabra05G0055500 Salix brachista HOM05D004569 ORTHO05D005333 1.1e-27 127.5 92 71.7
BcaB07g29675 Brassica carinata HOM05D004569 ORTHO05D005333 1.5e-27 127.1 129 53.5
TPR.G14863 Trifolium pratense HOM05D004569 ORTHO05D005333 1.5e-27 127.1 156 48.7
Zm00001eb076250 Zea mays HOM05D004569 ORTHO05D005333 2.0e-27 126.7 147 45.6
BcaC03g18183 Brassica carinata HOM05D004569 ORTHO05D005333 2.6e-27 126.3 131 54.2
Zm00001eb076290 Zea mays HOM05D004569 ORTHO05D005333 2.6e-27 126.3 135 47.4
Zm00001eb310390 Zea mays HOM05D004569 ORTHO05D005333 2.6e-27 126.3 135 47.4
Eucgr.H03416 Eucalyptus grandis HOM05D004569 ORTHO05D005333 3.3e-27 125.9 137 49.6
TAR636G3114 Trochodendron aralioides HOM05D004569 ORTHO05D005333 3.3e-27 125.9 103 65.0
A02p42590 Brassica napus HOM05D004569 ORTHO05D005333 4.4e-27 125.6 129 55.0
BraA02t09187Z Brassica rapa HOM05D004569 ORTHO05D005333 4.4e-27 125.6 129 55.0
Sopen11g003670 Solanum pennellii HOM05D004569 ORTHO05D005333 5.7e-27 125.2 176 44.9
ATR0829G086 Amborella trichopoda HOM05D004569 ORTHO05D005333 2.2e-26 123.2 125 53.6
MELO3C014285.2 Cucumis melo HOM05D004569 ORTHO05D005333 1.8e-25 120.2 183 42.6
BcaC08g46303 Brassica carinata HOM05D004569 ORTHO05D005333 2.4e-25 119.8 130 51.5
C06p41320 Brassica napus HOM05D004569 ORTHO05D005333 3.1e-25 119.4 128 52.3
BolC6t39293H Brassica oleracea HOM05D004569 ORTHO05D005333 3.1e-25 119.4 128 52.3
Aqoxy2G03457 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 1.2e-24 117.5 83 67.5
BcaC01g02544 Brassica carinata HOM05D004569 ORTHO05D005333 2.0e-24 116.7 123 54.5
C03p63650 Brassica napus HOM05D004569 ORTHO05D005333 2.0e-24 116.7 123 54.5
BolC3t18624H Brassica oleracea HOM05D004569 ORTHO05D005333 2.0e-24 116.7 123 54.5
Lsat_1_v5_gn_6_95400 Lactuca sativa HOM05D004569 ORTHO05D005333 2.0e-24 116.7 116 48.3
PGSC0003DMG400027326 Solanum tuberosum HOM05D004569 ORTHO05D005333 2.0e-24 116.7 184 41.8
unitig_748.g7305 Utricularia gibba HOM05D004569 ORTHO05D005333 7.7e-24 114.8 117 50.4
Atru.chr4.2398 Acer truncatum HOM05D004569 ORTHO05D005333 1.7e-23 113.6 91 60.4
COL.COLO4_21559 Corchorus olitorius HOM05D004569 ORTHO05D005333 1.7e-23 113.6 99 55.6
Hma1.2p1_0602F.1_g187570 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 1.7e-23 113.6 89 61.8
Mapoly0090s0037 Marchantia polymorpha HOM05D004569 ORTHO05D005333 2.2e-23 113.2 123 45.5
Pp3c21_14050 Physcomitrium patens HOM05D004569 ORTHO05D005333 2.2e-23 113.2 137 43.8
FvH4_4g01070 Fragaria vesca HOM05D004569 ORTHO05D005333 2.9e-23 112.8 153 43.1
Psat3g162000 Pisum sativum HOM05D004569 ORTHO05D005333 6.5e-23 111.7 91 59.3
Atru.chr5.182 Acer truncatum HOM05D004569 ORTHO05D005333 1.5e-22 110.5 116 50.0
Os12g0488800 Oryza sativa ssp. japonica HOM05D004569 ORTHO05D005333 1.5e-22 110.5 90 57.8
FAN12G4296 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.5e-22 109.8 153 42.5
Medtr6g045603 Medicago truncatula HOM05D004569 ORTHO05D005333 2.5e-22 109.8 134 45.5
Medtr6g045613 Medicago truncatula HOM05D004569 ORTHO05D005333 3.2e-22 109.4 91 57.1
Migut.B00535 Erythranthe guttata HOM05D004569 ORTHO05D005333 7.2e-22 108.2 131 45.0
Dinv07599 Davidia involucrata HOM05D004569 ORTHO05D005333 1.2e-21 107.5 72 69.4
SalBow1G3047 Salvia bowleyana HOM05D004569 ORTHO05D005333 1.2e-21 107.5 94 56.4
RcHm_v2.0_Chr6g0280701 Rosa chinensis HOM05D004569 ORTHO05D005333 8.0e-21 104.8 154 42.9
RcHm_v2.0_Chr4g0387641 Rosa chinensis HOM05D004569 ORTHO05D005333 1.0e-20 104.4 150 43.3
FvH4_5g27570 Fragaria vesca HOM05D004569 ORTHO05D005333 4.0e-20 102.4 147 42.9
AagrBONN_evm.TU.Sc2ySwM_228.788 Anthoceros agrestis HOM05D004569 ORTHO05D005333 5.2e-20 102.1 143 40.6
CSS0028808 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.5e-19 100.5 127 48.0
BcaB02g09711 Brassica carinata HOM05D004569 ORTHO05D005333 2.0e-19 100.1 115 49.6
BraA06t25922Z Brassica rapa HOM05D004569 ORTHO05D005333 2.6e-19 99.8 118 48.3
HPP92_022914 Vanilla planifolia HOM05D004569 ORTHO05D005333 2.2e-18 96.7 144 42.4
AT3G28956 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 3.1e-17 92.8 70 67.1
SEGI_13490 Sequoiadendron giganteum HOM05D004569 ORTHO05D000001 4.5e-16 89.0 89 46.1
FAN13G2556 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.9e-15 86.3 138 42.8
AUR62033084 Chenopodium quinoa HOM05D004569 ORTHO05D005333 5.0e-15 85.5 94 46.8
SMO343G0078 Selaginella moellendorffii HOM05D004569 ORTHO05D005333 1.5e-14 84.0 165 34.5
arahy.Tifrunner.gnm1.ann1.LSLG48 Arachis hypogaea HOM05D001291 ORTHO05D005333 4.7e-13 79.0 84 47.6
Hma1.2p1_0549F.1_g176970 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 1.8e-12 77.0 94 41.5
FAN18G3311 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.3e-12 76.6 147 37.4
GSVIVG01008529001 Vitis vinifera HOM05D004569 ORTHO05D005333 3.0e-12 76.3 53 66.0
Lj6C645G5 Lonicera japonica HOM05D004569 ORTHO05D005333 1.5e-11 73.9 144 36.1
Phvul.001G219600 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 2.8e-10 69.7 122 36.9
SEGI_07191 Sequoiadendron giganteum HOM05D004569 ORTHO05D005333 6.3e-10 68.6 69 52.2
CBR_g19683 Chara braunii HOM05D004569 ORTHO05D005333 7.0e-09 65.1 88 38.6
AUR62008054 Chenopodium quinoa HOM05D000001 ORTHO05D000501 1.3e-07 60.8 76 40.8
vmacro08367 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 2.9e-07 59.7 158 30.4


User provided reference genes

Program Settings