Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 7.8e-166 587.0 292 100.0
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 1.2e-163 579.7 292 97.3
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 6.2e-163 577.4 292 96.9
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 8.7e-149 530.4 290 87.2
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 2.5e-148 528.9 284 90.1
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 4.3e-148 528.1 290 86.9
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 4.3e-148 528.1 290 88.3
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 4.3e-148 528.1 290 87.2
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 4.3e-148 528.1 290 88.3
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 7.4e-148 527.3 290 87.2
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 9.6e-148 526.9 284 89.8
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.6e-147 526.2 290 87.6
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 3.6e-147 525.0 290 86.6
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 3.6e-147 525.0 290 86.9
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 4.8e-147 524.6 290 87.6
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 6.2e-147 524.2 288 87.2
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 8.1e-147 523.9 290 87.6
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 8.1e-147 523.9 290 86.2
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.1e-146 523.5 290 86.9
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.4e-146 523.1 288 88.2
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 1.4e-146 523.1 284 88.0
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 2.4e-146 522.3 290 86.6
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 2.4e-146 522.3 290 87.2
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 2.4e-146 522.3 290 87.2
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 2.4e-146 522.3 288 87.2
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 2.4e-146 522.3 290 86.6
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 3.1e-146 521.9 290 86.2
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 4.0e-146 521.5 288 87.5
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 4.0e-146 521.5 284 88.4
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 9.0e-146 520.4 284 87.7
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 3.4e-145 518.5 290 86.9
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 3.4e-145 518.5 290 86.6
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 3.4e-145 518.5 290 86.6
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 3.4e-145 518.5 289 86.2
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 3.4e-145 518.5 290 85.9
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 4.5e-145 518.1 291 86.3
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 4.5e-145 518.1 290 86.6
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 4.5e-145 518.1 290 86.2
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 4.5e-145 518.1 290 85.9
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 5.8e-145 517.7 288 85.4
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 5.8e-145 517.7 288 86.1
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 7.6e-145 517.3 290 85.9
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 9.9e-145 516.9 290 86.9
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.3e-144 516.5 290 86.2
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 1.3e-144 516.5 288 86.8
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 1.3e-144 516.5 288 86.8
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 1.7e-144 516.2 288 87.2
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 2.2e-144 515.8 287 85.4
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 2.9e-144 515.4 288 85.4
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 2.9e-144 515.4 290 85.5
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 3.8e-144 515.0 290 86.6
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 3.8e-144 515.0 289 85.5
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 3.8e-144 515.0 289 85.5
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 3.8e-144 515.0 290 84.5
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 3.8e-144 515.0 284 88.0
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 4.9e-144 514.6 297 84.5
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 4.9e-144 514.6 294 85.0
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 4.9e-144 514.6 291 85.2
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 4.9e-144 514.6 288 86.1
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 4.9e-144 514.6 290 85.2
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 6.4e-144 514.2 288 86.1
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 6.4e-144 514.2 290 85.2
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 8.4e-144 513.8 288 85.8
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 8.4e-144 513.8 290 85.2
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 8.4e-144 513.8 290 85.5
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 1.1e-143 513.5 288 85.8
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.1e-143 513.5 290 86.2
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 1.1e-143 513.5 290 85.5
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 1.4e-143 513.1 289 85.1
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 1.4e-143 513.1 296 85.1
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 2.4e-143 512.3 286 85.3
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 3.2e-143 511.9 290 84.8
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 4.2e-143 511.5 288 85.4
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 4.2e-143 511.5 290 85.2
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 9.3e-143 510.4 290 84.8
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.2e-142 510.0 288 85.1
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.2e-142 510.0 288 85.1
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 1.2e-142 510.0 290 84.5
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 2.1e-142 509.2 289 84.4
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 2.1e-142 509.2 290 84.5
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 2.7e-142 508.8 290 84.8
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 2.7e-142 508.8 290 83.1
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 6.0e-142 507.7 288 84.4
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 6.0e-142 507.7 311 80.1
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 1.3e-141 506.5 295 84.1
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 1.3e-141 506.5 288 86.1
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 1.3e-141 506.5 290 83.8
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 1.3e-141 506.5 318 78.9
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 1.8e-141 506.1 288 84.0
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 1.8e-141 506.1 288 84.4
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 1.8e-141 506.1 290 85.2
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 1.5e-140 503.1 286 84.6
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 3.3e-140 501.9 289 84.1
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 4.3e-140 501.5 288 83.3
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 4.3e-140 501.5 276 87.0
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 2.8e-139 498.8 272 87.5
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 6.9e-138 494.2 273 87.5
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 6.9e-138 494.2 272 87.5
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 1.2e-137 493.4 272 87.5
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 1.5e-137 493.0 291 86.9
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 2.6e-137 492.3 284 83.5
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 7.6e-137 490.7 276 86.6
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 1.7e-136 489.6 292 83.2
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 6.5e-136 487.6 272 84.9
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 8.4e-136 487.3 272 86.8
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 1.9e-135 486.1 270 86.7
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 2.5e-135 485.7 290 83.8
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 2.5e-135 485.7 287 81.9
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 3.2e-135 485.3 288 82.6
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 3.2e-135 485.3 362 69.3
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 6.0e-134 481.1 272 86.4
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 1.3e-133 479.9 272 85.7
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 1.8e-133 479.6 279 84.9
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 2.3e-133 479.2 273 84.2
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 3.9e-133 478.4 270 85.2
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 8.7e-133 477.2 284 81.3
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.6e-131 473.0 259 88.4
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 4.8e-131 471.5 311 76.2
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.4e-130 469.9 300 77.3
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 1.2e-129 466.8 296 78.7
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 1.2e-129 466.8 296 78.7
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 5.9e-129 464.5 268 85.1
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 1.7e-128 463.0 284 77.1
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 2.2e-128 462.6 272 80.5
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 3.8e-128 461.8 255 87.1
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 3.8e-128 461.8 290 79.0
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 5.5e-127 458.0 255 85.9
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 1.6e-126 456.4 285 74.7
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 3.9e-125 451.8 255 85.1
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 2.8e-123 445.7 304 75.7
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 2.8e-123 445.7 288 77.8
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 2.4e-122 442.6 247 85.8
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 9.0e-122 440.7 324 69.1
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 2.6e-121 439.1 238 89.9
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 5.9e-121 438.0 254 83.9
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 5.5e-119 431.4 242 86.8
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 4.3e-116 421.8 291 69.8
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 8.8e-109 397.5 391 56.8
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 1.3e-107 393.7 275 73.1
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 2.4e-106 389.4 217 84.8
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 1.5e-95 353.6 273 68.1
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 7.2e-95 351.3 400 51.2
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 2.7e-94 349.4 198 84.8
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 1.4e-93 347.1 190 84.2
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 5.5e-87 325.1 173 88.4
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 7.2e-87 324.7 265 66.4
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 2.3e-80 303.1 286 58.0
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-74 282.7 173 76.3
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 2.7e-73 279.6 243 61.3
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 3.4e-68 262.7 194 70.6
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 7.0e-66 255.0 261 47.5
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 1.2e-49 201.1 187 61.5
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 2.7e-49 199.9 133 74.4
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 2.7e-49 199.9 133 74.4
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 4.5e-36 156.0 142 58.5
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 8.1e-30 135.2 129 61.2
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 6.0e-25 119.0 80 72.5
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 2.5e-23 113.6 72 69.4
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 1.6e-22 110.9 66 75.8
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 4.8e-22 109.4 88 64.8
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 4.8e-22 109.4 88 64.8
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 3.4e-20 103.2 64 78.1
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 7.9e-17 92.0 52 76.9
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 2.1e-14 84.0 46 87.0
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 2.6e-12 77.0 45 80.0
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 7.6e-12 75.5 90 54.4
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 7.6e-12 75.5 90 54.4
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 3.6e-09 66.6 39 87.2
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 1.6e-06 57.8 39 66.7
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 8.2e-06 55.5 32 81.2


User provided reference genes

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