Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 1.2e-194 682.9 341 100.0
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 4.5e-173 611.3 308 98.7
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 2.3e-132 476.1 291 80.8
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 4.0e-129 465.3 298 78.5
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 9.9e-128 460.7 298 76.8
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.9e-127 459.1 298 76.2
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 1.1e-126 457.2 301 75.4
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 1.9e-126 456.4 298 77.2
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.2e-126 455.7 299 75.6
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 5.4e-126 454.9 301 76.4
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 7.1e-126 454.5 298 76.8
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 2.1e-125 453.0 298 75.5
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 7.8e-125 451.1 303 74.3
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 1.3e-124 450.3 301 75.4
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.0e-124 449.1 300 76.0
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 5.1e-124 448.4 301 74.4
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.1e-123 447.2 299 75.9
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 1.5e-123 446.8 307 71.0
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 2.5e-123 446.0 289 77.2
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 3.3e-123 445.7 299 74.6
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 4.3e-123 445.3 298 74.8
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 2.8e-122 442.6 301 73.8
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 6.2e-122 441.4 301 73.8
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.6e-120 436.0 299 72.9
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 3.4e-120 435.6 298 73.5
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 3.4e-120 435.6 289 75.8
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 1.3e-119 433.7 303 71.9
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.3e-119 433.7 298 71.5
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 1.7e-119 433.3 302 72.8
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 1.7e-119 433.3 302 71.9
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 3.8e-119 432.2 304 72.4
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 4.9e-119 431.8 302 72.5
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.4e-118 430.3 303 71.0
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 2.4e-118 429.5 302 72.5
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 3.2e-118 429.1 297 71.7
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 3.2e-118 429.1 303 71.0
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 1.6e-117 426.8 303 70.6
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 6.0e-117 424.9 304 70.4
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 7.8e-117 424.5 303 70.3
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 1.0e-116 424.1 302 70.9
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 1.0e-116 424.1 303 70.3
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 1.3e-116 423.7 279 74.9
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 1.7e-116 423.3 299 71.2
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 3.0e-116 422.5 303 70.3
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 3.9e-116 422.2 301 70.1
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 3.9e-116 422.2 297 71.0
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 6.6e-116 421.4 301 70.8
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 8.7e-116 421.0 299 69.6
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 1.5e-115 420.2 302 70.5
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.5e-115 420.2 303 71.6
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 2.5e-115 419.5 305 69.5
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 2.5e-115 419.5 299 70.2
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 3.3e-115 419.1 297 70.4
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 5.6e-115 418.3 306 68.3
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 5.6e-115 418.3 301 71.1
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 5.6e-115 418.3 300 69.7
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 5.6e-115 418.3 282 74.5
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 7.3e-115 417.9 335 64.8
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 1.3e-114 417.2 305 68.9
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.1e-114 416.4 283 73.5
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 8.1e-114 414.5 301 69.8
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 5.3e-113 411.8 298 69.5
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 5.3e-113 411.8 320 67.8
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 5.3e-113 411.8 321 66.7
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 6.9e-113 411.4 298 67.8
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 9.0e-113 411.0 299 70.2
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 1.2e-112 410.6 310 66.8
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.5e-112 410.2 297 68.4
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.0e-112 409.8 320 67.5
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 3.4e-112 409.1 298 69.8
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.4e-112 408.7 294 70.7
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 4.4e-112 408.7 299 69.2
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 9.9e-112 407.5 283 72.4
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.2e-111 406.4 287 72.1
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 3.8e-111 405.6 256 77.7
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 1.9e-110 403.3 301 67.4
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 7.1e-110 401.4 301 67.8
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 6.0e-109 398.3 294 68.4
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 1.0e-108 397.5 294 68.7
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 3.9e-108 395.6 293 68.6
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 5.1e-108 395.2 299 68.6
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 5.3e-105 385.2 298 67.4
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 1.5e-104 383.6 296 64.9
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 1.3e-103 380.6 278 68.0
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 6.7e-100 368.2 302 62.9
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 1.5e-99 367.1 247 76.9
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 1.6e-98 363.6 261 70.1
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 8.1e-98 361.3 247 72.5
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 1.1e-97 360.9 249 73.1
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 4.0e-97 359.0 273 68.5
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 6.9e-97 358.2 325 60.6
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 2.2e-95 353.2 243 72.4
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 3.2e-94 349.4 245 73.1
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.1e-91 340.9 207 78.7
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 1.9e-91 340.1 302 56.6
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 2.4e-89 333.2 208 77.9
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 2.4e-89 333.2 298 56.0
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 6.9e-89 331.6 247 69.2
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 1.3e-79 300.8 218 70.2
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 2.9e-79 299.7 221 70.1
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 2.1e-77 293.5 247 62.3
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 2.6e-75 286.6 252 61.1
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 3.7e-74 282.7 292 55.8
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.4e-73 280.0 447 42.5
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.6e-72 276.6 241 62.7
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 1.0e-71 274.6 218 65.1
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 7.9e-69 265.0 149 84.6
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 4.4e-67 259.2 223 62.8
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 7.4e-67 258.5 186 68.8
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 2.2e-66 256.9 317 44.2
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 1.2e-61 241.1 184 69.0
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 1.0e-60 238.0 210 62.9
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 3.8e-55 219.5 181 62.4
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 2.8e-50 203.4 212 57.1
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 6.3e-50 202.2 167 62.3
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 4.5e-48 196.1 111 79.3
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 5.9e-48 195.7 129 73.6
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 1.5e-46 191.0 122 73.0
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 8.0e-45 185.3 98 90.8
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.2e-40 171.4 96 84.4
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 5.6e-38 162.5 162 49.4
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 2.0e-32 144.1 128 63.3
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 4.6e-32 142.9 80 80.0
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 3.0e-31 140.2 154 51.3
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 6.2e-29 132.5 262 34.4
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 1.4e-28 131.3 352 29.8
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 2.6e-27 127.1 163 46.0
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 4.9e-26 122.9 70 82.9
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 4.1e-25 119.8 133 45.1
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 5.2e-20 102.8 94 59.6
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 7.5e-19 99.0 108 54.6
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.3e-15 88.2 92 56.5
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 4.7e-13 79.7 89 51.7
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 4.9e-10 69.7 90 48.9
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 2.4e-09 67.4 31 83.9
Cfa016005 Carpinus fangiana HOM05D005614 ORTHO05D006759 5.4e-09 66.2 50 66.0


User provided reference genes

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