Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 0.0e+00 1233.4 628 100.0
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 0.0e+00 1219.1 629 98.6
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 4.7e-285 984.2 618 80.6
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 1.4e-276 956.1 617 78.3
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 1.8e-276 955.7 619 77.2
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 7.8e-272 940.3 619 77.1
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 7.1e-265 917.1 544 82.2
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 1.3e-261 906.4 618 73.9
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.9e-257 892.5 580 76.4
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.2e-256 889.8 579 76.2
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 2.7e-256 888.6 587 76.0
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 7.4e-254 880.6 585 74.9
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 4.8e-253 877.9 586 74.9
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 4.8e-253 877.9 586 74.9
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 6.2e-253 877.5 586 74.9
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 6.9e-252 874.0 587 75.1
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 6.4e-250 867.5 586 74.7
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 1.1e-249 866.7 587 74.3
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 1.1e-249 866.7 587 74.6
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 9.3e-249 863.6 597 72.5
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 1.2e-248 863.2 594 73.7
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 4.6e-248 861.3 585 75.0
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 2.3e-247 859.0 587 73.8
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 2.3e-247 859.0 601 72.2
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 1.1e-246 856.7 586 73.7
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 2.5e-246 855.5 583 73.9
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 3.3e-246 855.1 531 78.5
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 3.3e-246 855.1 587 73.1
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 6.2e-245 850.9 583 72.0
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.1e-244 850.1 583 74.1
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 1.8e-244 849.4 587 72.6
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 3.1e-244 848.6 585 73.5
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 4.0e-244 848.2 587 72.9
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 5.3e-244 847.8 586 73.5
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 6.9e-244 847.4 586 72.7
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 2.0e-243 845.9 591 73.4
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 2.0e-243 845.9 529 78.6
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 2.6e-243 845.5 586 72.2
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 7.6e-243 844.0 587 73.1
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 7.6e-243 844.0 586 72.0
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 1.0e-242 843.6 581 71.3
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 1.7e-242 842.8 587 72.1
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 2.2e-242 842.4 587 72.1
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 2.9e-242 842.0 624 68.1
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 6.5e-242 840.9 583 72.6
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 1.9e-241 839.3 587 73.1
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 2.5e-241 839.0 537 76.5
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 2.5e-241 839.0 582 72.5
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 3.2e-241 838.6 582 73.0
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 7.1e-241 837.4 583 72.4
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 1.6e-240 836.3 537 76.4
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 3.5e-240 835.1 585 71.5
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 7.9e-240 833.9 585 71.6
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 7.9e-240 833.9 615 68.0
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 1.3e-239 833.2 623 69.8
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 6.7e-239 830.9 584 70.5
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 1.5e-238 829.7 586 71.8
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 4.3e-238 828.2 610 70.2
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 9.7e-238 827.0 583 71.9
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 2.8e-237 825.5 581 71.8
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 6.3e-237 824.3 584 72.1
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 8.2e-237 823.9 583 71.5
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 1.1e-236 823.5 585 70.6
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 2.0e-235 819.3 537 76.0
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 2.6e-235 818.9 588 71.1
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 7.6e-235 817.4 533 75.0
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 1.0e-234 817.0 594 69.9
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 2.2e-234 815.8 585 71.6
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 2.9e-234 815.5 537 75.0
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 1.9e-233 812.8 522 76.4
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 7.9e-232 807.4 589 69.8
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 5.1e-231 804.7 585 70.3
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 6.7e-231 804.3 612 67.6
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 1.9e-230 802.7 573 71.9
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 2.2e-229 799.3 611 67.3
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 2.8e-229 798.9 587 69.8
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 4.8e-229 798.1 616 67.0
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 8.2e-229 797.3 587 69.8
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 4.7e-224 781.6 583 69.1
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 1.8e-223 779.6 597 67.0
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 5.1e-223 778.1 672 63.2
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 5.3e-220 768.1 755 57.0
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 7.4e-214 747.7 613 64.6
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 1.6e-211 740.0 583 65.4
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 5.9e-211 738.0 574 64.6
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 7.2e-209 731.1 521 71.2
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 2.0e-206 723.0 541 68.2
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 2.2e-205 719.5 495 72.5
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 3.1e-204 715.7 577 63.1
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 1.1e-201 707.2 641 61.0
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.2e-200 703.7 715 55.1
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 4.7e-200 701.8 605 59.3
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 2.3e-199 699.5 563 66.3
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 1.8e-196 689.9 566 62.4
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 1.2e-192 677.2 574 60.1
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 5.6e-185 651.7 582 61.2
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 1.2e-184 650.6 443 72.5
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 3.1e-175 619.4 427 72.8
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 8.9e-167 591.3 459 66.7
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 9.2e-156 554.7 368 75.0
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 7.3e-145 518.5 378 66.7
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 7.6e-142 508.4 323 77.4
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 1.0e-130 471.5 361 66.5
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 1.0e-130 471.5 288 81.6
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 1.9e-129 467.2 572 46.0
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 3.5e-123 446.4 271 77.5
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 1.2e-107 394.8 345 62.3
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 1.9e-92 344.4 259 68.0
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 1.2e-86 325.1 246 65.4
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 3.6e-83 313.5 189 80.4
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 4.5e-78 296.6 250 60.8
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 1.2e-70 271.9 505 34.7
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 4.7e-59 233.4 176 66.5
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 3.1e-58 230.7 193 63.2
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.2e-57 228.8 367 40.1
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 3.2e-55 220.7 138 80.4
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 3.3e-52 210.7 133 76.7
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 2.6e-49 201.1 173 61.3
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 1.6e-43 181.8 108 75.0
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 2.2e-32 144.8 133 61.7
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 1.5e-28 132.1 113 57.5
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 1.5e-25 122.1 165 46.7
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 1.3e-24 119.0 267 30.7
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 3.3e-20 104.4 69 68.1
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 3.8e-16 90.9 148 42.6
QL04p021235 Quercus lobata HOM05D006110 ORTHO05D011410 3.5e-06 57.8 79 49.4


User provided reference genes

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