Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 2.7e-166 588.6 292 100.0
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 1.9e-164 582.4 292 98.3
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 4.7e-163 577.8 292 96.9
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 4.3e-148 528.1 290 88.6
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 5.6e-148 527.7 290 86.9
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 7.4e-148 527.3 284 90.1
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 1.3e-147 526.6 290 88.3
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.8e-147 525.4 284 89.8
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 2.8e-147 525.4 290 86.6
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 2.8e-147 525.4 290 86.9
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 6.2e-147 524.2 288 87.5
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 8.1e-147 523.9 288 88.2
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.1e-146 523.5 290 87.2
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 1.4e-146 523.1 290 86.6
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 1.4e-146 523.1 290 87.6
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 2.4e-146 522.3 290 86.2
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 2.4e-146 522.3 290 86.6
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 3.1e-146 521.9 290 86.9
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 4.0e-146 521.5 284 88.7
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 5.3e-146 521.2 290 85.9
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 5.3e-146 521.2 290 86.9
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 6.9e-146 520.8 290 87.2
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 6.9e-146 520.8 290 87.2
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 6.9e-146 520.8 290 86.6
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 9.0e-146 520.4 290 86.2
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 9.0e-146 520.4 284 87.7
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 1.2e-145 520.0 290 86.6
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 1.5e-145 519.6 290 86.2
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 2.0e-145 519.2 290 85.9
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 2.0e-145 519.2 288 86.8
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 2.0e-145 519.2 288 86.5
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 3.4e-145 518.5 290 86.6
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 4.5e-145 518.1 290 85.9
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 4.5e-145 518.1 288 86.1
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 5.8e-145 517.7 284 87.3
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 7.6e-145 517.3 288 86.8
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 9.9e-145 516.9 290 86.6
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 9.9e-145 516.9 290 86.6
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.3e-144 516.5 290 86.6
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 2.2e-144 515.8 290 86.6
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 2.2e-144 515.8 290 86.2
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 2.9e-144 515.4 291 85.9
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 3.8e-144 515.0 284 88.4
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 4.9e-144 514.6 288 86.5
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 6.4e-144 514.2 289 85.5
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 6.4e-144 514.2 288 86.5
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 6.4e-144 514.2 288 86.5
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 8.4e-144 513.8 288 85.4
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 8.4e-144 513.8 290 85.5
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 8.4e-144 513.8 287 85.7
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 1.1e-143 513.5 288 86.8
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 1.4e-143 513.1 297 84.5
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.4e-143 513.1 290 85.2
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 1.4e-143 513.1 290 86.2
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 2.4e-143 512.3 290 86.2
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 2.4e-143 512.3 290 85.2
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 3.2e-143 511.9 294 84.7
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 3.2e-143 511.9 291 84.9
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 4.2e-143 511.5 290 85.5
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 5.5e-143 511.1 288 85.8
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 5.5e-143 511.1 290 85.9
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 7.1e-143 510.8 288 85.4
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 7.1e-143 510.8 289 84.8
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 7.1e-143 510.8 296 85.1
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 7.1e-143 510.8 290 83.8
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 9.3e-143 510.4 288 85.4
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 9.3e-143 510.4 289 84.8
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 1.2e-142 510.0 290 84.5
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.6e-142 509.6 290 84.8
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 2.1e-142 509.2 286 85.0
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 2.7e-142 508.8 290 85.2
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 2.7e-142 508.8 290 84.8
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 2.7e-142 508.8 289 84.4
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 2.7e-142 508.8 290 84.5
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 6.0e-142 507.7 288 84.4
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 6.0e-142 507.7 290 84.5
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 7.9e-142 507.3 290 84.1
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 1.0e-141 506.9 290 84.1
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 3.0e-141 505.4 290 82.8
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 5.1e-141 504.6 290 85.2
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 6.7e-141 504.2 295 83.7
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 8.7e-141 503.8 289 83.7
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.1e-140 503.4 288 83.3
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.1e-140 503.4 288 83.3
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 1.1e-140 503.4 288 85.8
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 1.1e-140 503.4 288 83.3
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 1.1e-140 503.4 289 84.4
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 1.1e-140 503.4 311 79.4
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 1.5e-140 503.1 290 83.4
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 1.9e-140 502.7 318 78.3
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 5.6e-140 501.1 288 83.0
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 7.4e-140 500.7 288 83.3
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 1.3e-139 500.0 276 87.3
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 1.6e-139 499.6 286 84.3
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 8.1e-139 497.3 272 87.5
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 8.1e-139 497.3 288 82.3
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 1.0e-136 490.3 273 87.2
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 1.0e-136 490.3 272 86.8
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 1.7e-136 489.6 272 86.8
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 1.7e-136 489.6 284 83.5
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 2.9e-136 488.8 272 87.1
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 2.9e-136 488.8 291 86.3
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 8.4e-136 487.3 292 83.2
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 8.4e-136 487.3 288 83.0
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 1.4e-135 486.5 276 85.9
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 1.2e-134 483.4 287 82.2
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 1.6e-134 483.0 272 84.2
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.6e-134 483.0 290 83.4
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 3.5e-134 481.9 270 85.9
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 4.6e-134 481.5 362 68.8
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 3.0e-133 478.8 272 85.7
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 3.9e-133 478.4 272 86.0
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 1.9e-132 476.1 284 81.3
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 2.5e-132 475.7 286 80.8
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 4.3e-132 474.9 279 84.2
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 2.1e-131 472.6 273 82.4
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 2.8e-131 472.2 259 88.0
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 3.1e-130 468.8 311 75.9
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 5.3e-130 468.0 300 77.3
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 4.5e-129 464.9 296 78.7
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 4.5e-129 464.9 296 78.7
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 5.9e-129 464.5 284 77.5
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 5.0e-128 461.5 268 84.7
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 6.5e-128 461.1 272 79.8
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 2.5e-127 459.1 290 78.6
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 7.2e-127 457.6 255 86.3
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.0e-125 453.8 255 85.1
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 1.8e-125 453.0 285 74.0
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 3.3e-124 448.7 255 84.7
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 7.4e-124 447.6 288 78.1
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 3.1e-122 442.2 304 74.7
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 2.0e-121 439.5 245 85.7
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 5.9e-121 438.0 254 83.9
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 5.9e-121 438.0 324 69.1
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 5.0e-120 434.9 238 88.7
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 2.1e-118 429.5 242 86.4
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 2.0e-116 422.9 291 70.1
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 8.8e-109 397.5 391 57.0
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 2.6e-108 396.0 275 73.8
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 1.6e-105 386.7 217 84.8
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 4.2e-95 352.1 273 68.1
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 4.7e-94 348.6 198 84.8
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.0e-93 347.4 400 50.8
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 1.8e-93 346.7 190 84.7
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 5.5e-87 325.1 265 66.0
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 9.5e-87 324.3 184 83.7
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 1.1e-79 300.8 278 58.6
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 2.7e-73 279.6 243 61.7
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-73 279.3 173 75.1
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 3.7e-67 259.2 194 70.1
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 1.4e-66 257.3 261 48.3
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 7.1e-50 201.8 187 61.5
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 2.7e-49 199.9 133 75.2
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 2.7e-49 199.9 133 75.2
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 4.5e-36 156.0 142 59.2
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.1e-29 134.8 129 60.5
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 2.1e-25 120.6 80 72.5
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 1.6e-22 110.9 72 68.1
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 1.1e-21 108.2 66 74.2
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 2.4e-21 107.1 88 63.6
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.4e-21 107.1 88 63.6
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 4.5e-20 102.8 64 78.1
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 5.1e-16 89.4 52 75.0
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 2.1e-14 84.0 46 87.0
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 2.6e-12 77.0 45 80.0
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 1.7e-11 74.3 90 53.3
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 1.7e-11 74.3 90 53.3
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 6.1e-09 65.9 37 89.2
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 7.4e-07 58.9 39 69.2
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 8.2e-06 55.5 32 81.2


User provided reference genes

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