Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0258 Papaver somniferum HOM05D001734 ORTHO05D003483 1.4e-248 862.4 425 100.0
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.7e-225 785.8 388 99.2
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 4.4e-218 761.1 388 96.9
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 4.3e-165 585.1 387 73.6
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 1.0e-158 563.9 386 71.0
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 1.8e-155 553.1 388 69.1
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 5.9e-154 548.1 388 68.0
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 8.5e-153 544.3 386 67.9
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 7.9e-151 537.7 386 67.1
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 1.4e-150 537.0 385 66.5
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 6.3e-148 528.1 385 67.8
vmacro19389 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 6.3e-148 528.1 388 64.2
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 5.3e-147 525.0 386 65.8
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.4e-144 516.9 388 63.9
Gohir.A09G171650 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.9e-144 516.5 386 65.0
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 3.2e-144 515.8 386 64.8
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 2.7e-143 512.7 384 65.1
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 4.7e-143 511.9 388 63.9
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 4.7e-143 511.9 386 64.8
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 2.3e-142 509.6 386 66.1
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 3.9e-142 508.8 386 63.7
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 6.7e-142 508.1 386 64.5
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 1.5e-141 506.9 386 65.0
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 9.7e-141 504.2 399 61.2
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.3e-140 503.8 387 64.1
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 1.7e-140 503.4 386 63.0
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 4.8e-140 501.9 385 62.1
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 4.8e-140 501.9 385 61.3
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 1.4e-139 500.4 388 63.1
CAN.G1305.20 Capsicum annuum HOM05D001734 ORTHO05D003483 1.8e-139 500.0 384 63.3
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 2.4e-139 499.6 387 61.8
Ca_16175_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 5.3e-139 498.4 393 62.1
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 7.0e-139 498.0 385 62.1
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 9.1e-139 497.7 385 62.1
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.2e-138 497.3 390 63.1
Lj9A448T39 Lonicera japonica HOM05D001734 ORTHO05D003483 4.5e-138 495.4 425 60.2
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 7.7e-138 494.6 387 61.5
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 5.0e-137 491.9 388 62.4
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 4.2e-136 488.8 389 63.5
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 5.5e-136 488.4 387 62.0
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.1e-135 486.5 387 60.2
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 3.6e-135 485.7 388 60.8
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 1.0e-134 484.2 386 61.7
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 3.7e-132 475.7 384 59.6
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 5.3e-131 471.9 386 60.4
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.2e-130 470.7 384 60.2
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 1.2e-130 470.7 384 60.2
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 4.5e-130 468.8 388 59.8
Cpa.g.sc1166.1 Carica papaya HOM05D001734 ORTHO05D003483 1.7e-129 466.8 371 62.3
VMungo1309G1926 Vigna mungo HOM05D000002 ORTHO05D000001 2.2e-129 466.5 368 61.4
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 5.0e-129 465.3 389 57.8
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 5.5e-128 461.8 394 60.2
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 1.6e-127 460.3 385 58.2
Hund02745 Selenicereus undatus HOM05D001734 ORTHO05D003483 2.3e-126 456.4 357 62.5
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 6.7e-126 454.9 387 58.9
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 2.0e-125 453.4 385 58.2
Lalb_Chr08g0236521 Lupinus albus HOM05D001734 ORTHO05D003483 2.0e-125 453.4 388 59.5
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 3.3e-125 452.6 388 57.7
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.3e-125 452.6 388 57.7
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.7e-125 451.8 388 57.7
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 9.1e-123 444.5 382 57.1
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 2.2e-121 439.9 397 54.4
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 9.4e-120 434.5 335 63.6
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 2.3e-118 429.9 399 55.1
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 6.8e-118 428.3 394 55.1
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 7.5e-117 424.9 385 53.8
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 7.5e-117 424.9 385 53.8
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 7.5e-117 424.9 388 53.6
FAN05G0227 Fragaria x ananassa HOM05D001734 ORTHO05D003483 8.3e-116 421.4 365 57.3
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 4.5e-114 415.6 388 53.4
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 1.3e-113 414.1 367 55.6
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 2.3e-110 403.3 386 55.4
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 9.8e-109 397.9 363 53.4
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 2.2e-108 396.7 363 53.2
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 3.7e-108 396.0 314 62.7
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.4e-107 394.0 271 69.4
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 5.9e-106 388.7 274 67.9
CDE07G0247 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 2.9e-105 386.3 283 62.9
ATR0730G017 Amborella trichopoda HOM05D001734 ORTHO05D003483 6.6e-105 385.2 387 51.2
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 5.6e-104 382.1 388 47.9
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 1.3e-100 370.9 387 45.2
Migut.C00312 Erythranthe guttata HOM05D001734 ORTHO05D003483 8.0e-95 351.7 357 51.8
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 1.8e-94 350.5 309 56.3
TPR.G6095 Trifolium pratense HOM05D001734 ORTHO05D003483 1.6e-90 337.4 299 58.2
Nitab4.5_0000984g0080 Nicotiana tabacum HOM05D001734 ORTHO05D003483 3.6e-87 326.2 330 51.5
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 5.2e-86 322.4 241 66.0
Rhsim06G0125200 Rhododendron simsii HOM05D001734 ORTHO05D003483 8.9e-78 295.0 253 56.5
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 1.5e-77 294.3 392 41.1
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 1.3e-76 291.2 402 40.0
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 1.9e-67 260.8 400 38.8
SEGI_17988 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 6.6e-65 252.3 252 51.2
COL.COLO4_30229 Corchorus olitorius HOM05D001734 ORTHO05D003483 4.5e-61 239.6 222 56.8
SHI17017 Sapria himalayana HOM05D001734 ORTHO05D003483 3.2e-59 233.4 229 53.7
Rhsim02G0151200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.9e-56 224.2 247 47.8
arahy.Tifrunner.gnm1.ann1.1I6Y5K Arachis hypogaea HOM05D001734 ORTHO05D003483 1.0e-36 158.7 103 67.0
arahy.Tifrunner.gnm1.ann1.BK2P93 Arachis hypogaea HOM05D001734 ORTHO05D003483 7.2e-35 152.5 190 43.7
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 7.9e-34 149.1 154 50.6
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.8e-30 137.9 389 30.3
arahy.Tifrunner.gnm1.ann1.EMU6Q2 Arachis hypogaea HOM05D001734 ORTHO05D003483 4.5e-29 133.3 116 55.2
CBR_g286 Chara braunii HOM05D000004 ORTHO05D000002 7.7e-29 132.5 154 44.2
Rhsim06G0125100 Rhododendron simsii HOM05D001734 ORTHO05D003483 6.5e-28 129.4 117 56.4
SHI17018 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-25 121.3 226 34.5
TPR.G5903 Trifolium pratense HOM05D001734 ORTHO05D003483 1.5e-24 118.2 93 59.1
MD14G1180200 Malus domestica HOM05D001734 ORTHO05D003483 7.0e-22 109.4 94 59.6
SEGI_06250 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 3.2e-19 100.5 86 53.5
TPR.G21158 Trifolium pratense HOM05D001734 ORTHO05D003483 1.1e-14 85.5 70 58.6
Cre13.g564350 Chlamydomonas reinhardtii HOM05D001734 ORTHO05D003483 1.4e-09 68.6 233 27.5
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 2.2e-07 61.2 65 49.2
TPR.G5917 Trifolium pratense HOM05D001734 ORTHO05D003483 2.8e-07 60.8 55 58.2
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 6.3e-07 59.7 77 45.5


User provided reference genes

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