Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 0.0e+00 2112.8 1207 100.0
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 0.0e+00 1823.5 1153 89.3
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 2.2e-267 926.4 1323 51.9
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 3.4e-263 912.5 1337 50.6
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 4.3e-202 709.5 1219 45.4
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 4.7e-172 609.8 1263 43.9
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.2e-164 585.1 1264 38.9
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 2.1e-164 584.3 1202 42.0
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 1.8e-163 581.3 1222 39.0
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 1.1e-160 572.0 1237 41.7
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 1.4e-160 571.6 1213 39.5
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 9.1e-160 568.9 1268 41.1
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.1e-157 562.0 1256 40.9
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 1.1e-157 562.0 1255 39.4
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 5.5e-157 559.7 1234 40.9
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 2.1e-156 557.8 1241 39.5
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 8.0e-156 555.8 1241 39.5
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 8.0e-156 555.8 1242 40.6
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 4.0e-155 553.5 1228 38.1
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 6.8e-155 552.7 1231 39.8
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 2.6e-154 550.8 1260 40.5
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 2.6e-154 550.8 1231 39.8
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 2.6e-154 550.8 875 42.9
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 1.7e-153 548.1 1264 40.4
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 2.8e-153 547.4 1258 40.0
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 4.8e-153 546.6 1233 40.5
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 1.4e-152 545.0 1072 44.1
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 1.2e-151 542.0 1214 39.5
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 2.0e-151 541.2 1240 38.2
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 5.0e-150 536.6 1226 39.9
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 3.2e-149 533.9 1243 40.6
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 7.2e-149 532.7 1197 41.8
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 2.1e-148 531.2 1217 39.9
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 8.0e-148 529.3 1223 39.3
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 1.0e-147 528.9 1239 37.6
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 1.4e-147 528.5 1323 37.7
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 3.0e-147 527.3 1233 38.2
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 3.0e-147 527.3 1261 40.4
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 6.8e-147 526.2 1245 40.2
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 8.8e-147 525.8 1226 39.2
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 1.5e-146 525.0 1223 39.2
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 1.5e-146 525.0 1243 38.6
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 1.2e-143 515.4 1226 38.5
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 3.5e-143 513.8 1239 37.4
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 4.5e-143 513.5 1242 39.3
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 5.9e-143 513.1 1230 39.3
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 7.7e-143 512.7 1240 39.4
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 5.0e-142 510.0 1079 39.5
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 1.5e-141 508.4 1242 37.2
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 3.3e-141 507.3 1249 39.3
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 3.6e-140 503.8 1300 39.5
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 6.1e-140 503.1 1261 38.4
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 8.0e-140 502.7 1218 37.8
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 4.0e-139 500.4 1258 38.2
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 4.0e-139 500.4 1246 40.0
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 1.5e-138 498.4 1239 37.0
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 2.0e-138 498.0 1234 37.0
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 4.4e-138 496.9 1267 39.9
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 2.9e-137 494.2 1227 38.5
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 5.4e-136 490.0 1229 38.4
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.6e-135 488.4 905 40.0
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.0e-134 485.7 1256 38.5
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 8.6e-134 482.6 1236 36.8
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 1.5e-133 481.9 1223 37.4
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 5.6e-133 479.9 1276 38.3
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 4.7e-132 476.9 1039 37.9
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 5.2e-131 473.4 802 41.5
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 6.8e-131 473.0 1153 39.4
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 2.6e-130 471.1 762 41.6
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 9.8e-130 469.2 1267 36.3
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 2.2e-129 468.0 1245 35.5
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 1.1e-128 465.7 870 40.0
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.2e-127 462.2 1187 37.7
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 1.6e-127 461.8 774 40.4
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 3.5e-127 460.7 1227 36.6
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 1.9e-125 454.9 1257 36.4
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 7.3e-125 453.0 1353 36.1
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 9.5e-125 452.6 1221 36.9
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 1.7e-121 441.8 1251 36.1
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 8.3e-121 439.5 1081 35.3
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 1.4e-120 438.7 1261 35.1
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 1.9e-120 438.3 1271 34.1
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 3.2e-120 437.6 1270 34.6
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 7.1e-120 436.4 1274 34.9
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 1.6e-119 435.3 1212 37.4
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 1.3e-118 432.2 1214 35.7
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 3.3e-117 427.6 879 37.7
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 9.5e-117 426.0 1251 34.5
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 1.6e-116 425.2 1248 34.5
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 3.6e-116 424.1 1293 33.8
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 3.1e-115 421.0 1246 34.3
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 3.1e-115 421.0 1246 34.3
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 5.2e-115 420.2 898 38.0
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 8.9e-115 419.5 1248 34.1
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 1.2e-114 419.1 1095 35.4
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 2.0e-114 418.3 852 38.0
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 9.9e-114 416.0 1264 35.8
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 6.4e-113 413.3 651 43.0
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 2.4e-112 411.4 1245 34.0
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 1.3e-110 405.6 1293 33.2
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 3.0e-110 404.4 1293 33.1
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 3.9e-110 404.1 1292 37.8
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 6.6e-110 403.3 1166 35.2
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 1.4e-107 395.6 785 37.8
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 4.4e-106 390.6 1187 34.4
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 4.2e-104 384.0 1008 37.5
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 7.1e-104 383.3 1221 33.3
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 2.1e-100 371.7 1205 35.0
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 2.7e-95 354.8 855 34.6
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 1.0e-94 352.8 1235 34.3
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 3.0e-94 351.3 1198 36.0
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 8.1e-92 343.2 1199 33.9
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 4.0e-91 340.9 874 34.1
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 6.9e-91 340.1 917 33.9
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 1.2e-90 339.3 1171 31.1
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 3.4e-90 337.8 1218 33.7
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.2e-82 312.8 655 37.4
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 2.0e-82 312.0 1196 30.4
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 1.4e-80 305.8 879 33.7
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 1.2e-79 302.8 1236 34.5
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 5.0e-73 280.8 398 45.7
Zm00001eb203360 Zea mays HOM05D001849 ORTHO05D004075 5.0e-73 280.8 895 31.5
TAR622G0522 Trochodendron aralioides HOM05D001849 ORTHO05D004075 1.7e-65 255.8 1219 27.8
Nn3g17987 Nelumbo nucifera HOM05D001849 ORTHO05D004075 8.8e-62 243.4 1258 28.4
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 2.2e-60 238.8 902 29.3
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 1.4e-56 226.1 904 29.8
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 1.0e-54 219.9 912 29.7
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 3.9e-54 218.0 1173 27.6
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 2.1e-47 195.7 350 36.3
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 4.7e-47 194.5 878 29.2
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 1.7e-44 186.0 892 32.4
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 1.4e-43 183.0 1242 27.8
Dinv04913 Davidia involucrata HOM05D001849 ORTHO05D004075 1.0e-41 176.8 854 28.1
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 8.0e-39 167.2 179 52.5
QL01p003145 Quercus lobata HOM05D001849 ORTHO05D004075 2.3e-38 165.6 851 26.7
Dinv16157 Davidia involucrata HOM05D001849 ORTHO05D004075 3.4e-37 161.8 879 27.2
Medtr8g106435 Medicago truncatula HOM05D001849 ORTHO05D004075 4.4e-37 161.4 485 30.5
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 9.1e-35 153.7 273 37.0
CSS0014980 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 5.9e-34 151.0 673 26.6
Actinidia14933 Actinidia chinensis HOM05D001849 ORTHO05D004075 5.0e-33 147.9 846 26.7
Haze_16071 Corylus avellana HOM05D001849 ORTHO05D004075 9.5e-32 143.7 360 33.6
Prupe.1G319400 Prunus persica HOM05D001849 ORTHO05D004075 4.7e-31 141.4 776 26.2
Rhsim09G0102300 Rhododendron simsii HOM05D001849 ORTHO05D004075 5.7e-29 134.4 835 26.6
CiPaw.05G244500 Carya illinoinensis HOM05D001849 ORTHO05D004075 2.4e-27 129.0 629 26.6
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 1.2e-26 126.7 219 40.6
CANSAT01G2891 Cannabis sativa HOM05D001849 ORTHO05D004075 1.9e-24 119.4 782 26.3
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 1.2e-23 116.7 184 41.3
Haze_00674 Corylus avellana HOM05D001849 ORTHO05D004075 4.7e-23 114.8 434 28.8
Manes.14G108850 Manihot esculenta HOM05D001849 ORTHO05D004075 8.0e-23 114.0 808 24.3
Mapoly0055s0059 Marchantia polymorpha HOM05D001849 ORTHO05D004075 4.0e-22 111.7 795 23.4
Atru.chr11.324 Acer truncatum HOM05D001849 ORTHO05D004075 1.5e-21 109.8 114 53.5
HanXRQChr04g0094421 Helianthus annuus HOM05D001849 ORTHO05D004075 6.4e-20 104.4 163 42.3
Cfa015821 Carpinus fangiana HOM05D001849 ORTHO05D004075 1.1e-19 103.6 190 38.4
Lj6A751T55 Lonicera japonica HOM05D001849 ORTHO05D004075 2.0e-18 99.4 103 55.3
Pp3c13_8340 Physcomitrium patens HOM05D001849 ORTHO05D004075 1.0e-17 97.1 845 21.3
SHI29649 Sapria himalayana HOM05D001849 ORTHO05D004075 8.6e-17 94.0 429 29.1
vmacro15055 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 3.3e-16 92.0 71 60.6
Pp3c3_3510 Physcomitrium patens HOM05D001849 ORTHO05D004075 9.5e-16 90.5 885 22.8
TAR626G0936 Trochodendron aralioides HOM05D001849 ORTHO05D004075 2.8e-15 89.0 75 60.0
SHI29650 Sapria himalayana HOM05D001849 ORTHO05D004075 6.2e-15 87.8 125 38.4
BcaC03g15372 Brassica carinata HOM05D001849 ORTHO05D004075 8.9e-14 84.0 421 27.6
vmacro10614 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 2.0e-13 82.8 91 53.8
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis HOM05D001849 ORTHO05D004075 6.4e-12 77.8 854 23.4
SHI29648 Sapria himalayana HOM05D001849 ORTHO05D004075 5.4e-11 74.7 64 54.7
CBR_g31688 Chara braunii HOM05D001849 ORTHO05D004075 9.2e-11 73.9 104 38.5
Medtr8g106415 Medicago truncatula HOM05D001849 ORTHO05D004075 3.5e-10 72.0 93 46.2
Oeu013447.1 Olea europaea HOM05D001849 ORTHO05D004075 6.0e-10 71.2 177 36.7
SHI29651 Sapria himalayana HOM05D001849 ORTHO05D004075 1.0e-09 70.5 590 36.8
Manes.06G063600 Manihot esculenta HOM05D001849 ORTHO05D004075 1.9e-08 66.2 73 54.8
Nitab4.5_0006425g0080 Nicotiana tabacum HOM05D001849 ORTHO05D004075 3.1e-06 58.9 222 32.9


User provided reference genes

Program Settings