Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3495 Papaver somniferum HOM05D001790 ORTHO05D023066 2.3e-64 248.8 133 100.0
PSO832G0951 Papaver somniferum HOM05D001790 ORTHO05D003691 1.1e-34 150.2 108 78.7
PSO210G1133 Papaver somniferum HOM05D001790 ORTHO05D003691 4.2e-34 148.3 108 79.6
PSO210G6516 Papaver somniferum HOM05D001790 ORTHO05D003691 4.2e-34 148.3 108 79.6
TAR362G0657 Trochodendron aralioides HOM05D001790 ORTHO05D003691 1.8e-29 132.9 108 66.7
Nitab4.5_0005388g0030 Nicotiana tabacum HOM05D001790 ORTHO05D003691 4.1e-29 131.7 108 67.6
Nitab4.5_0008677g0040 Nicotiana tabacum HOM05D001790 ORTHO05D003691 4.1e-29 131.7 108 67.6
PGSC0003DMG402028588 Solanum tuberosum HOM05D001790 ORTHO05D003691 4.1e-29 131.7 108 66.7
Sopen01g042420 Solanum pennellii HOM05D001790 ORTHO05D003691 9.1e-29 130.6 108 65.7
Peaxi162Scf00037g00237 Petunia axillaris HOM05D001790 ORTHO05D003691 1.2e-28 130.2 108 66.7
Solyc01g098880.3 Solanum lycopersicum HOM05D001790 ORTHO05D003691 4.5e-28 128.3 108 63.9
ATR0706G137 Amborella trichopoda HOM05D001790 ORTHO05D003691 7.7e-28 127.5 108 63.9
Lsat_1_v5_gn_5_1480 Lactuca sativa HOM05D001790 ORTHO05D003691 7.7e-28 127.5 108 63.9
Hund21240 Selenicereus undatus HOM05D001790 ORTHO05D003691 7.7e-28 127.5 108 63.0
Sc16g0008440 Simmondsia chinensis HOM05D001790 ORTHO05D003691 7.7e-28 127.5 108 63.0
Actinidia20058 Actinidia chinensis HOM05D001790 ORTHO05D003691 1.0e-27 127.1 108 65.7
AUR62024709 Chenopodium quinoa HOM05D001790 ORTHO05D003691 1.0e-27 127.1 108 64.8
Hma1.2p1_0928F.1_g237860 Hydrangea macrophylla HOM05D001790 ORTHO05D003691 1.0e-27 127.1 108 66.7
AUR62011866 Chenopodium quinoa HOM05D001790 ORTHO05D003691 1.7e-27 126.3 108 64.8
Lj7A664T57 Lonicera japonica HOM05D001790 ORTHO05D003691 2.2e-27 125.9 108 66.7
TAR365G0532 Trochodendron aralioides HOM05D001790 ORTHO05D003691 2.2e-27 125.9 108 63.0
Actinidia16513 Actinidia chinensis HOM05D001790 ORTHO05D003691 2.9e-27 125.6 108 63.9
Dinv40278 Davidia involucrata HOM05D001790 ORTHO05D003691 2.9e-27 125.6 108 64.8
Hma1.2p1_0617F.1_g190250 Hydrangea macrophylla HOM05D001790 ORTHO05D003691 2.9e-27 125.6 108 64.8
CSS0035783 Camellia sinensis var. sinensis HOM05D001790 ORTHO05D003691 5.0e-27 124.8 108 64.8
Sc06g0003380 Simmondsia chinensis HOM05D001790 ORTHO05D003691 5.0e-27 124.8 108 63.0
FAN05G5279 Fragaria x ananassa HOM05D001790 ORTHO05D003691 6.5e-27 124.4 106 65.1
Lj5g0001404 Lotus japonicus HOM05D001790 ORTHO05D003691 6.5e-27 124.4 108 65.7
Medtr1g082850 Medicago truncatula HOM05D001790 ORTHO05D003691 6.5e-27 124.4 108 67.6
GSVIVG01000041001 Vitis vinifera HOM05D001790 ORTHO05D003691 6.5e-27 124.4 108 64.8
MELO3C026449.2 Cucumis melo HOM05D001790 ORTHO05D003691 8.5e-27 124.0 108 63.0
CsaV3_5G013970 Cucumis sativus L. HOM05D001790 ORTHO05D003691 8.5e-27 124.0 108 63.0
Glyma.10G155000 Glycine max HOM05D001790 ORTHO05D003691 8.5e-27 124.0 108 64.8
Sed0016587 Sechium edule HOM05D001790 ORTHO05D003691 1.1e-26 123.6 108 63.9
CDE10G0434 Ceratophyllum demersum HOM05D001790 ORTHO05D003691 1.5e-26 123.2 108 62.0
Glyma.20G233300 Glycine max HOM05D001790 ORTHO05D003691 1.5e-26 123.2 108 64.8
FAN02G4035 Fragaria x ananassa HOM05D001790 ORTHO05D003691 1.9e-26 122.9 106 64.2
ClCG03G016950 Citrullus lanatus HOM05D001790 ORTHO05D003691 2.5e-26 122.5 108 63.0
Lsat_1_v5_gn_2_87680 Lactuca sativa HOM05D001790 ORTHO05D003691 2.5e-26 122.5 108 62.0
Ca_10108_v3 Cicer arietinum L. HOM05D001790 ORTHO05D003691 3.2e-26 122.1 108 64.8
PGSC0003DMG400013480 Solanum tuberosum HOM05D001790 ORTHO05D003691 3.2e-26 122.1 106 64.2
TPR.G14125 Trifolium pratense HOM05D001790 ORTHO05D003691 3.2e-26 122.1 108 63.9
FAN09G3771 Fragaria x ananassa HOM05D001790 ORTHO05D003691 5.5e-26 121.3 106 63.2
MBI04_g35660_MAGBIO Magnolia biondii HOM05D001790 ORTHO05D003691 5.5e-26 121.3 108 61.1
Atru.chr8.1410 Acer truncatum HOM05D001790 ORTHO05D003691 7.2e-26 120.9 108 59.3
Ca_01500_v3 Cicer arietinum L. HOM05D001790 ORTHO05D003691 9.4e-26 120.6 108 63.9
ECA234G0311 Erigeron canadensis HOM05D001790 ORTHO05D003691 9.4e-26 120.6 108 63.0
HanXRQChr04g0099811 Helianthus annuus HOM05D001790 ORTHO05D003691 9.4e-26 120.6 108 62.0
RcHm_v2.0_Chr3g0454601 Rosa chinensis HOM05D001790 ORTHO05D003691 9.4e-26 120.6 108 62.0
Actinidia06601 Actinidia chinensis HOM05D001790 ORTHO05D003691 1.2e-25 120.2 108 62.0
FvH4_6g05710 Fragaria vesca HOM05D001790 ORTHO05D003691 1.6e-25 119.8 106 62.3
FAN14G1835 Fragaria x ananassa HOM05D001790 ORTHO05D003691 1.6e-25 119.8 106 62.3
MD12G1220200 Malus domestica HOM05D001790 ORTHO05D003691 1.6e-25 119.8 108 63.0
Manes.02G210900 Manihot esculenta HOM05D001790 ORTHO05D003691 1.6e-25 119.8 108 60.2
Manes.10G109523 Manihot esculenta HOM05D001790 ORTHO05D003691 2.1e-25 119.4 108 60.2
arahy.Tifrunner.gnm1.ann1.8W4KMR Arachis hypogaea HOM05D001790 ORTHO05D003691 2.7e-25 119.0 108 63.0
arahy.Tifrunner.gnm1.ann1.PXJ7J7 Arachis hypogaea HOM05D001790 ORTHO05D003691 2.7e-25 119.0 108 63.0
Cc02_g33530 Coffea canephora HOM05D001790 ORTHO05D003691 3.6e-25 118.6 108 60.2
VMungo0720G0527 Vigna mungo HOM05D001790 ORTHO05D003691 4.7e-25 118.2 108 62.0
CSS0029145 Camellia sinensis var. sinensis HOM05D001790 ORTHO05D003691 6.1e-25 117.9 108 62.0
Prupe.6G327000 Prunus persica HOM05D001790 ORTHO05D003691 6.1e-25 117.9 108 62.0
Sed0000871 Sechium edule HOM05D001790 ORTHO05D003691 6.1e-25 117.9 108 58.3
arahy.Tifrunner.gnm1.ann1.DW9AST Arachis hypogaea HOM05D001790 ORTHO05D003691 8.0e-25 117.5 108 62.0
Sp2g20690 Schrenkiella parvula HOM05D001790 ORTHO05D003691 8.0e-25 117.5 108 60.2
BcaC03g17790 Brassica carinata HOM05D001790 ORTHO05D003691 1.4e-24 116.7 108 60.2
A02p38650 Brassica napus HOM05D001790 ORTHO05D003691 1.4e-24 116.7 108 60.2
C02p58140 Brassica napus HOM05D001790 ORTHO05D003691 1.4e-24 116.7 108 60.2
BraA02t08841Z Brassica rapa HOM05D001790 ORTHO05D003691 1.4e-24 116.7 108 60.2
BcaNung02448 Brassica carinata HOM05D001790 ORTHO05D003691 1.8e-24 116.3 105 61.0
BolC7t44620H Brassica oleracea HOM05D001790 ORTHO05D003691 1.8e-24 116.3 105 61.0
arahy.Tifrunner.gnm1.ann1.29QZWB Arachis hypogaea HOM05D001790 ORTHO05D003691 2.3e-24 115.9 108 61.1
THA.LOC104818684 Tarenaya hassleriana HOM05D001790 ORTHO05D003691 2.3e-24 115.9 108 60.2
THA.LOC104821709 Tarenaya hassleriana HOM05D001790 ORTHO05D003691 2.3e-24 115.9 108 59.3
vmacro12777 Vaccinium macrocarpon HOM05D001790 ORTHO05D003691 2.3e-24 115.9 125 55.2
Eucgr.H04482 Eucalyptus grandis HOM05D001790 ORTHO05D003691 3.0e-24 115.5 108 59.3
Sabra05G0078200 Salix brachista HOM05D001790 ORTHO05D003691 3.0e-24 115.5 108 60.2
MD04G1206400 Malus domestica HOM05D001790 ORTHO05D003691 4.0e-24 115.2 108 60.2
AL6G39530 Arabidopsis lyrata HOM05D001790 ORTHO05D003691 5.2e-24 114.8 108 59.3
BolC2t11882H Brassica oleracea HOM05D001790 ORTHO05D003691 5.2e-24 114.8 108 59.3
Aa31LG11G9230 Aethionema arabicum HOM05D001790 ORTHO05D003691 6.8e-24 114.4 108 59.3
Phvul.007G180500 Phaseolus vulgaris HOM05D001790 ORTHO05D003691 6.8e-24 114.4 108 61.1
A06p37450 Brassica napus HOM05D001790 ORTHO05D003691 8.8e-24 114.0 105 60.0
C07p40910 Brassica napus HOM05D001790 ORTHO05D003691 8.8e-24 114.0 105 60.0
BraA06t26669Z Brassica rapa HOM05D001790 ORTHO05D003691 8.8e-24 114.0 105 60.0
Medtr7g029025 Medicago truncatula HOM05D001790 ORTHO05D003691 8.8e-24 114.0 108 63.0
Potri.005G094400 Populus trichocarpa HOM05D001790 ORTHO05D003691 8.8e-24 114.0 108 59.3
CAN.G134.54 Capsicum annuum HOM05D001790 ORTHO05D003691 1.2e-23 113.6 108 59.3
HanXRQChr07g0195751 Helianthus annuus HOM05D001790 ORTHO05D003691 1.2e-23 113.6 108 60.2
AT5G27470 Arabidopsis thaliana HOM05D001790 ORTHO05D003691 1.5e-23 113.2 108 58.3
QL03p006890 Quercus lobata HOM05D001790 ORTHO05D003691 1.5e-23 113.2 108 59.3
Thhalv10004203m.g Eutrema salsugineum HOM05D001790 ORTHO05D003691 2.0e-23 112.8 108 58.3
Lsat_1_v5_gn_3_25760 Lactuca sativa HOM05D001790 ORTHO05D003691 2.0e-23 112.8 106 60.4
PGR031G2902 Punica granatum HOM05D001790 ORTHO05D003691 2.6e-23 112.5 108 59.3
CiPaw.08G165400 Carya illinoinensis HOM05D001790 ORTHO05D003691 3.4e-23 112.1 108 56.5
Cfa006580 Carpinus fangiana HOM05D001790 ORTHO05D003691 4.4e-23 111.7 108 56.5
HPP92_015353 Vanilla planifolia HOM05D001790 ORTHO05D023066 4.4e-23 111.7 105 61.9
CiPaw.07G016900 Carya illinoinensis HOM05D001790 ORTHO05D003691 5.7e-23 111.3 108 57.4
TWI56G0634 Tripterygium wilfordii HOM05D001790 ORTHO05D003691 5.7e-23 111.3 108 59.3
Cpa.g.sc26.176 Carica papaya HOM05D001790 ORTHO05D003691 7.5e-23 110.9 105 56.2
Lalb_Chr18g0045581 Lupinus albus HOM05D001790 ORTHO05D003691 7.5e-23 110.9 108 59.3
Os03g0198400 Oryza sativa ssp. japonica HOM05D001790 ORTHO05D003691 9.8e-23 110.5 105 61.9
Lj5g0023584 Lotus japonicus HOM05D001790 ORTHO05D003691 1.3e-22 110.2 108 59.3
Psat6g149440 Pisum sativum HOM05D001790 ORTHO05D003691 1.3e-22 110.2 108 58.3
Carub.0006s2506 Capsella rubella HOM05D001790 ORTHO05D003691 1.7e-22 109.8 108 56.5
CARHR289470 Cardamine hirsuta HOM05D001790 ORTHO05D003691 2.2e-22 109.4 108 55.6
EL10As5g23472 Beta vulgaris HOM05D001790 ORTHO05D003691 2.8e-22 109.0 108 58.3
BcaNung04373 Brassica carinata HOM05D001790 ORTHO05D003691 3.7e-22 108.6 105 59.0
Lsat_1_v5_gn_4_42741 Lactuca sativa HOM05D001790 ORTHO05D003691 3.7e-22 108.6 108 58.3
SEGI_34874 Sequoiadendron giganteum HOM05D001790 ORTHO05D003691 1.1e-21 107.1 108 57.4
MSTRG.27559 Avicennia marina HOM05D001790 ORTHO05D003691 1.4e-21 106.7 108 58.3
Aqoxy3G00799 Aquilegia oxysepala HOM05D001790 ORTHO05D003691 1.8e-21 106.3 105 55.2
RcHm_v2.0_Chr2g0115881 Rosa chinensis HOM05D001790 ORTHO05D003691 1.8e-21 106.3 111 54.1
SGA_v2.0_scaffold354G49726 Striga asiatica HOM05D001790 ORTHO05D003691 1.8e-21 106.3 108 59.3
Ah.02g112000 Amaranthus hybridus HOM05D001790 ORTHO05D003691 3.1e-21 105.5 91 62.6
BcaC04g23675 Brassica carinata HOM05D001790 ORTHO05D003691 3.1e-21 105.5 105 59.0
BolC9t53506H Brassica oleracea HOM05D001790 ORTHO05D003691 3.1e-21 105.5 105 59.0
QL02p001500 Quercus lobata HOM05D001790 ORTHO05D003691 3.1e-21 105.5 106 57.5
A09p05320 Brassica napus HOM05D001790 ORTHO05D003691 4.1e-21 105.1 105 59.0
C09p05790 Brassica napus HOM05D001790 ORTHO05D003691 4.1e-21 105.1 105 59.0
Rhsim01G0058000 Rhododendron simsii HOM05D001790 ORTHO05D003691 5.4e-21 104.8 122 53.3
DCAR_011444 Daucus carota HOM05D001790 ORTHO05D003691 9.1e-21 104.0 108 58.3
Solyc04g079870.2 Solanum lycopersicum HOM05D001790 ORTHO05D003691 9.1e-21 104.0 106 58.5
BraA09t36170Z Brassica rapa HOM05D001790 ORTHO05D003691 1.2e-20 103.6 105 59.0
DCAR_029748 Daucus carota HOM05D001790 ORTHO05D003691 1.2e-20 103.6 108 58.3
Ciclev10001143m.g Citrus clementina HOM05D001790 ORTHO05D003691 1.6e-20 103.2 108 52.8
Migut.F00862 Erythranthe guttata HOM05D001790 ORTHO05D003691 1.6e-20 103.2 108 55.6
Zm00001eb113140 Zea mays HOM05D001790 ORTHO05D003691 1.6e-20 103.2 110 58.2
QL06p003654 Quercus lobata HOM05D001790 ORTHO05D003691 2.0e-20 102.8 110 51.8
Zm00001eb400980 Zea mays HOM05D001790 ORTHO05D003691 7.7e-20 100.9 110 56.4
SalBow3G2039 Salvia bowleyana HOM05D001790 ORTHO05D003691 1.0e-19 100.5 105 55.2
SalBow4G2898 Salvia bowleyana HOM05D001790 ORTHO05D003691 1.0e-19 100.5 105 55.2
Hund07063 Selenicereus undatus HOM05D001790 ORTHO05D003691 1.0e-19 100.5 108 55.6
Cpa.g.sc48.197 Carica papaya HOM05D001790 ORTHO05D003691 1.3e-19 100.1 105 52.4
ECA246G3796 Erigeron canadensis HOM05D001790 ORTHO05D003691 1.3e-19 100.1 106 52.8
FAN05G0374 Fragaria x ananassa HOM05D001790 ORTHO05D003691 1.7e-19 99.8 158 42.4
Oeu016077.1 Olea europaea HOM05D001790 ORTHO05D003691 2.3e-19 99.4 98 55.1
AL6G39540 Arabidopsis lyrata HOM05D001790 ORTHO05D003691 5.0e-19 98.2 104 51.9
Gohir.A03G212700 Gossypium hirsutum HOM05D001790 ORTHO05D003691 6.6e-19 97.8 108 55.6
Gohir.D02G234200 Gossypium hirsutum HOM05D001790 ORTHO05D003691 6.6e-19 97.8 108 55.6
Gorai.005G262200 Gossypium raimondii HOM05D001790 ORTHO05D003691 6.6e-19 97.8 108 55.6
Lalb_Chr21g0310711 Lupinus albus HOM05D001790 ORTHO05D003691 6.6e-19 97.8 108 52.8
SGA_v2.0_scaffold5G02920 Striga asiatica HOM05D001790 ORTHO05D003691 6.6e-19 97.8 119 52.9
Pp3c13_16820 Physcomitrium patens HOM05D001790 ORTHO05D003691 1.5e-18 96.7 108 51.9
Gohir.A01G179400 Gossypium hirsutum HOM05D001790 ORTHO05D003691 7.2e-18 94.4 108 53.7
Gohir.D01G170200 Gossypium hirsutum HOM05D001790 ORTHO05D003691 1.2e-17 93.6 108 53.7
Gorai.002G211800 Gossypium raimondii HOM05D001790 ORTHO05D003691 1.2e-17 93.6 108 53.7
Duzib248G1449 Durio zibethinus HOM05D001790 ORTHO05D003691 1.6e-17 93.2 108 53.7
Thecc.02G035000 Theobroma cacao HOM05D001790 ORTHO05D003691 2.1e-17 92.8 108 53.7
Os01g0559100 Oryza sativa ssp. japonica HOM05D001790 ORTHO05D003691 2.8e-17 92.4 84 64.3
Duzib132G0634 Durio zibethinus HOM05D001790 ORTHO05D003691 1.8e-16 89.7 108 52.8
Zm00001eb433060 Zea mays HOM05D001790 ORTHO05D023066 3.0e-16 89.0 96 55.2
A09p05300 Brassica napus HOM05D001643 ORTHO05D001580 5.2e-16 88.2 95 53.7
CAN.G1077.17 Capsicum annuum HOM05D001790 ORTHO05D003691 8.9e-16 87.4 119 45.4
Sopen04g033440 Solanum pennellii HOM05D001790 ORTHO05D003691 8.9e-16 87.4 82 59.8
Sopen04g033740 Solanum pennellii HOM05D001790 ORTHO05D003691 8.9e-16 87.4 82 59.8
BcaB04g19676 Brassica carinata HOM05D001790 ORTHO05D003691 1.2e-15 87.0 134 44.8
Aqoxy3G00711 Aquilegia oxysepala HOM05D001790 ORTHO05D003691 1.5e-15 86.7 106 50.0
AL1G50890 Arabidopsis lyrata HOM05D001790 ORTHO05D003691 1.5e-15 86.7 103 52.4
COL.COLO4_17835 Corchorus olitorius HOM05D001790 ORTHO05D003691 2.0e-15 86.3 108 48.1
SEGI_10175 Sequoiadendron giganteum HOM05D001790 ORTHO05D023066 2.0e-15 86.3 67 68.7
Haze_04181 Corylus avellana HOM05D001790 ORTHO05D003691 2.6e-15 85.9 67 65.7
Mapoly0079s0015 Marchantia polymorpha HOM05D001790 ORTHO05D003691 3.4e-15 85.5 107 52.3
Carub.0001s3362 Capsella rubella HOM05D001790 ORTHO05D003691 4.4e-15 85.1 103 52.4
AagrBONN_evm.TU.Sc2ySwM_344.3412 Anthoceros agrestis HOM05D001790 ORTHO05D003691 5.7e-15 84.7 95 51.6
Rhsim01G0059500 Rhododendron simsii HOM05D001790 ORTHO05D003691 5.7e-15 84.7 108 52.8
unitig_37.g12350 Utricularia gibba HOM05D001790 ORTHO05D003691 1.3e-14 83.6 109 51.4
SMO146G0126 Selaginella moellendorffii HOM05D001790 ORTHO05D003691 2.2e-14 82.8 108 47.2
Psat6g149680 Pisum sativum HOM05D001790 ORTHO05D003691 3.7e-14 82.0 109 50.5
AL8G17390 Arabidopsis lyrata HOM05D001790 ORTHO05D003691 6.3e-14 81.3 103 49.5
ECA246G0857 Erigeron canadensis HOM05D001790 ORTHO05D003691 1.8e-13 79.7 106 45.3
Zm00001eb384020 Zea mays HOM05D001790 ORTHO05D023066 2.4e-13 79.3 67 65.7
ECA246G2160 Erigeron canadensis HOM05D001790 ORTHO05D003691 4.1e-13 78.6 66 59.1
unitig_46.g18641 Utricularia gibba HOM05D001790 ORTHO05D023066 5.4e-13 78.2 110 50.9
MCO07G384 Micromonas commoda HOM05D001790 ORTHO05D003691 7.0e-13 77.8 122 41.8
COL.COLO4_05829 Corchorus olitorius HOM05D001790 ORTHO05D003691 1.0e-11 73.9 90 50.0
Thhalv10029181m.g Eutrema salsugineum HOM05D001790 ORTHO05D003691 1.0e-11 73.9 104 48.1
Ah.11g049780 Amaranthus hybridus HOM05D001790 ORTHO05D003691 3.9e-11 72.0 63 61.9
Cre03.g189400 Chlamydomonas reinhardtii HOM05D001790 ORTHO05D003691 3.9e-11 72.0 57 68.4
Nn1g02214 Nelumbo nucifera HOM05D001790 ORTHO05D003691 2.1e-09 66.2 63 54.0
HPP92_015619 Vanilla planifolia HOM05D001790 ORTHO05D003691 1.8e-08 63.2 103 42.7
PRCOL_00002676 Prasinoderma coloniale HOM05D001790 ORTHO05D003691 2.9e-06 55.8 81 42.0
SMO118G0093 Selaginella moellendorffii HOM05D001790 ORTHO05D003691 8.3e-06 54.3 110 39.1


User provided reference genes

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