Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 1.4e-287 992.3 501 100.0
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 7.1e-276 953.4 506 95.7
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 1.8e-215 752.7 534 72.8
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 8.0e-211 737.3 536 70.5
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 6.6e-205 717.6 534 70.2
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 4.4e-201 704.9 453 75.5
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 6.4e-200 701.0 501 70.7
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 1.4e-199 699.9 501 70.7
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 1.9e-199 699.5 499 70.1
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 4.1e-199 698.4 498 70.3
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 5.4e-199 698.0 481 72.1
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 6.0e-198 694.5 494 70.9
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 1.1e-196 690.3 488 71.9
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 2.1e-195 686.0 474 72.8
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 6.2e-195 684.5 511 68.9
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 1.8e-194 682.9 496 69.4
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 8.9e-194 680.6 509 69.0
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 2.0e-193 679.5 495 70.5
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 3.4e-193 678.7 494 70.2
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 5.8e-193 677.9 483 70.4
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 7.5e-193 677.6 465 73.3
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 9.9e-193 677.2 472 72.7
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 4.9e-192 674.9 504 68.5
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 6.4e-192 674.5 504 68.1
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 8.3e-192 674.1 511 67.9
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 4.1e-191 671.8 482 70.3
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 7.1e-191 671.0 501 69.7
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 7.1e-191 671.0 496 69.2
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 1.6e-190 669.8 502 70.1
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 1.6e-190 669.8 507 68.8
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 4.6e-190 668.3 432 76.4
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 1.0e-189 667.2 506 67.0
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 3.0e-189 665.6 514 67.3
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 3.9e-189 665.2 510 67.8
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 5.1e-189 664.8 484 70.5
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 6.6e-189 664.5 428 76.2
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 8.6e-189 664.1 511 68.1
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 8.6e-189 664.1 432 75.7
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 1.1e-188 663.7 470 71.5
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 1.9e-188 662.9 482 69.5
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 7.3e-188 661.0 451 72.1
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 9.5e-188 660.6 430 75.8
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 1.6e-187 659.8 503 67.2
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 1.6e-187 659.8 501 66.7
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 3.6e-187 658.7 491 69.0
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 6.2e-187 657.9 444 73.4
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 1.8e-186 656.4 469 70.4
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 1.8e-186 656.4 507 66.1
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 2.4e-186 656.0 499 67.7
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 5.2e-186 654.8 470 70.4
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 5.2e-186 654.8 431 73.8
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 8.9e-186 654.1 505 66.1
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 8.9e-186 654.1 501 66.9
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 3.4e-185 652.1 502 67.9
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 3.4e-185 652.1 491 68.6
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 4.4e-185 651.7 450 71.8
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 4.4e-185 651.7 486 68.7
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 5.8e-185 651.4 503 64.6
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 7.6e-185 651.0 429 75.1
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 9.9e-185 650.6 565 60.7
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 2.2e-184 649.4 505 66.5
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 2.9e-184 649.0 432 75.0
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.9e-184 649.0 504 66.5
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 8.4e-184 647.5 431 75.6
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 8.4e-184 647.5 500 65.2
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.1e-183 647.1 447 70.0
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 1.4e-183 646.7 510 66.1
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 3.2e-183 645.6 515 63.1
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 4.2e-183 645.2 454 71.6
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 4.2e-183 645.2 454 71.6
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 7.1e-183 644.4 448 69.9
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 9.2e-183 644.0 460 69.8
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 9.2e-183 644.0 490 67.1
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 9.2e-183 644.0 466 70.8
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 1.2e-182 643.7 506 65.4
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.1e-182 642.9 499 65.9
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 4.6e-182 641.7 460 69.3
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 1.7e-181 639.8 528 65.7
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 3.0e-181 639.0 472 68.4
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 3.0e-181 639.0 490 66.7
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 3.0e-181 639.0 472 68.4
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 3.0e-181 639.0 459 70.4
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 3.0e-181 639.0 492 67.1
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 5.1e-181 638.3 475 67.4
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 1.9e-180 636.3 471 67.1
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 1.9e-180 636.3 505 65.5
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 2.5e-180 636.0 505 65.5
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 2.5e-180 636.0 513 63.7
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 4.3e-180 635.2 467 69.0
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 5.6e-180 634.8 504 65.3
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 1.2e-179 633.6 455 68.4
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 1.6e-179 633.3 492 66.3
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 2.1e-179 632.9 444 71.8
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 4.7e-179 631.7 505 65.3
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 4.7e-179 631.7 434 72.6
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 1.8e-178 629.8 492 66.5
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 3.4e-177 625.5 435 71.5
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 4.4e-177 625.2 433 71.8
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 1.7e-176 623.2 476 64.7
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 1.4e-175 620.2 440 71.4
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 9.6e-172 607.4 446 68.4
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 3.6e-171 605.5 425 71.3
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 4.0e-170 602.1 497 63.8
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 1.3e-163 580.5 428 66.4
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 2.8e-163 579.3 436 64.7
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 7.6e-161 571.2 433 63.3
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 7.1e-159 564.7 441 66.4
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 1.5e-156 557.0 431 62.2
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 2.4e-154 549.7 433 64.4
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 2.7e-150 536.2 335 79.4
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 3.3e-148 529.3 373 69.4
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 3.7e-147 525.8 433 58.7
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 2.9e-144 516.2 438 58.7
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 5.7e-140 501.9 502 56.6
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.2e-135 485.7 500 53.2
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 5.1e-133 478.8 499 50.3
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 8.2e-131 471.5 498 53.6
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 8.5e-128 461.5 480 50.6
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 2.2e-123 446.8 411 57.7
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.6e-110 404.1 455 50.8
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.2e-99 367.1 233 76.0
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 2.9e-83 313.5 431 40.8
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 8.6e-80 302.0 414 43.2
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 2.8e-78 297.0 396 44.9
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 6.2e-78 295.8 226 62.4
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 3.0e-72 276.9 235 60.9
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 4.4e-68 263.1 232 61.2
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 9.3e-66 255.4 174 75.3
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 2.5e-63 247.3 334 47.0
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 1.4e-61 241.5 307 42.0
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 2.9e-59 233.8 484 29.8
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 3.8e-51 206.8 157 64.3
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 2.7e-49 200.7 389 35.2
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 2.1e-46 191.0 195 51.8
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 9.6e-39 165.6 131 65.6
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 6.7e-32 142.9 140 55.0
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 3.8e-27 127.1 137 54.0
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 5.0e-27 126.7 96 61.5
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 8.8e-24 115.9 67 77.6
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 3.1e-21 107.5 57 89.5
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 1.5e-20 105.1 78 62.8
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 7.7e-20 102.8 70 67.1
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 6.5e-19 99.8 86 65.1
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 3.1e-13 80.9 50 74.0
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 3.1e-13 80.9 50 74.0
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 4.1e-13 80.5 64 60.9
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 1.5e-07 62.0 71 52.1
SEGI_20498 Sequoiadendron giganteum HOM05D037692 ORTHO05D385547 6.3e-06 56.6 47 59.6


User provided reference genes

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