Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5242 Papaver somniferum HOM05D004857 ORTHO05D005663 6.6e-72 273.9 131 100.0
PSO407G0399 Papaver somniferum HOM05D001929 ORTHO05D002426 8.9e-45 183.7 87 96.6
PSO832G3983 Papaver somniferum HOM05D004857 ORTHO05D005663 3.4e-28 128.6 69 85.5
PSO421G0319 Papaver somniferum HOM05D004857 ORTHO05D005663 6.1e-09 64.7 51 60.8
PSO104G0255 Papaver somniferum HOM05D004857 ORTHO05D005663 7.9e-09 64.3 51 58.8
Hund21824 Selenicereus undatus HOM05D004857 ORTHO05D005663 1.0e-08 63.9 63 50.8
Sc08g0005030 Simmondsia chinensis HOM05D004857 ORTHO05D005663 1.0e-08 63.9 63 50.8
THA.LOC104819454 Tarenaya hassleriana HOM05D004857 ORTHO05D005663 1.0e-08 63.9 53 52.8
Potri.018G064100 Populus trichocarpa HOM05D004857 ORTHO05D005663 1.3e-08 63.5 53 54.7
Sabra18G0057000 Salix brachista HOM05D004857 ORTHO05D005663 1.3e-08 63.5 53 54.7
CAN.G457.2 Capsicum annuum HOM05D004857 ORTHO05D005663 2.3e-08 62.8 71 50.7
Cfa002936 Carpinus fangiana HOM05D004857 ORTHO05D005663 2.3e-08 62.8 63 49.2
Solyc07g017490.3 Solanum lycopersicum HOM05D004857 ORTHO05D005663 2.3e-08 62.8 71 50.7
Sopen07g006280 Solanum pennellii HOM05D004857 ORTHO05D005663 2.3e-08 62.8 71 50.7
PGSC0003DMG401015931 Solanum tuberosum HOM05D004857 ORTHO05D005663 2.3e-08 62.8 71 50.7
Lj6g0010651 Lotus japonicus HOM05D004857 ORTHO05D005663 3.0e-08 62.4 53 56.6
vmacro17076 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 3.0e-08 62.4 53 54.7
FAN23G0125 Fragaria x ananassa HOM05D004857 ORTHO05D005663 3.9e-08 62.0 51 54.9
RcHm_v2.0_Chr2g0095991 Rosa chinensis HOM05D004857 ORTHO05D005663 3.9e-08 62.0 51 54.9
Aa31LG5G9410 Aethionema arabicum HOM05D004857 ORTHO05D005663 5.1e-08 61.6 51 52.9
Dinv44702 Davidia involucrata HOM05D004857 ORTHO05D005663 5.1e-08 61.6 53 50.9
FvH4_1g09440 Fragaria vesca HOM05D004857 ORTHO05D005663 5.1e-08 61.6 51 54.9
FAN19G2563 Fragaria x ananassa HOM05D004857 ORTHO05D005663 5.1e-08 61.6 51 54.9
FAN26G0201 Fragaria x ananassa HOM05D004857 ORTHO05D005663 5.1e-08 61.6 51 54.9
FAN26G1404 Fragaria x ananassa HOM05D004857 ORTHO05D005663 5.1e-08 61.6 51 54.9
FAN28G2840 Fragaria x ananassa HOM05D004857 ORTHO05D005663 5.1e-08 61.6 51 54.9
Gohir.A05G036200 Gossypium hirsutum HOM05D004857 ORTHO05D005663 5.1e-08 61.6 71 47.9
Gohir.D05G037700 Gossypium hirsutum HOM05D004857 ORTHO05D005663 5.1e-08 61.6 71 47.9
Gorai.009G038200 Gossypium raimondii HOM05D004857 ORTHO05D005663 5.1e-08 61.6 71 47.9
Atru.chr7.1769 Acer truncatum HOM05D004857 ORTHO05D005663 6.7e-08 61.2 63 50.8
Actinidia39614 Actinidia chinensis HOM05D004857 ORTHO05D005663 6.7e-08 61.2 63 49.2
ATR0681G246 Amborella trichopoda HOM05D004857 ORTHO05D005663 6.7e-08 61.2 63 49.2
Cc06_g12730 Coffea canephora HOM05D004857 ORTHO05D005663 6.7e-08 61.2 63 49.2
Duzib168G0723 Durio zibethinus HOM05D004857 ORTHO05D005663 6.7e-08 61.2 71 49.3
ECA234G1433 Erigeron canadensis HOM05D000959 ORTHO05D000775 6.7e-08 61.2 51 54.9
EL10Ac4g09573 Beta vulgaris HOM05D004857 ORTHO05D005663 8.7e-08 60.8 61 50.8
Lsat_1_v5_gn_5_138760 Lactuca sativa HOM05D004857 ORTHO05D005663 8.7e-08 60.8 51 58.8
Nitab4.5_0001114g0050 Nicotiana tabacum HOM05D004857 ORTHO05D005663 8.7e-08 60.8 53 54.7
Nitab4.5_0002665g0010 Nicotiana tabacum HOM05D004857 ORTHO05D005663 8.7e-08 60.8 53 54.7
Thecc.09G070000 Theobroma cacao HOM05D004857 ORTHO05D005663 8.7e-08 60.8 61 50.8
GSVIVG01015011001 Vitis vinifera HOM05D004857 ORTHO05D005663 8.7e-08 60.8 63 50.8
Ciclev10007866m.g Citrus clementina HOM05D004857 ORTHO05D005663 1.1e-07 60.5 71 47.9
Migut.J00878 Erythranthe guttata HOM05D004857 ORTHO05D005663 1.1e-07 60.5 29 86.2
HanXRQChr12g0355141 Helianthus annuus HOM05D004857 ORTHO05D005663 1.1e-07 60.5 51 58.8
SalBow6G1194 Salvia bowleyana HOM05D004857 ORTHO05D005663 1.1e-07 60.5 53 54.7
MSTRG.19426 Avicennia marina HOM05D004857 ORTHO05D005663 1.5e-07 60.1 53 50.9
CiPaw.03G200100 Carya illinoinensis HOM05D004857 ORTHO05D005663 1.5e-07 60.1 63 47.6
AUR62000486 Chenopodium quinoa HOM05D004857 ORTHO05D005663 1.5e-07 60.1 53 50.9
AUR62006828 Chenopodium quinoa HOM05D004857 ORTHO05D005663 1.5e-07 60.1 53 50.9
COL.COLO4_21204 Corchorus olitorius HOM05D004857 ORTHO05D005663 1.5e-07 60.1 71 46.5
Duzib187G1561 Durio zibethinus HOM05D004857 ORTHO05D005663 1.5e-07 60.1 71 47.9
Eucgr.C00765 Eucalyptus grandis HOM05D004857 ORTHO05D005663 1.5e-07 60.1 63 46.0
vmacro03340 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 1.5e-07 60.1 53 52.8
AT2G26460 Arabidopsis thaliana HOM05D004857 ORTHO05D005663 1.9e-07 59.7 53 49.1
CANSAT56G1105 Cannabis sativa HOM05D004857 ORTHO05D005663 1.9e-07 59.7 51 52.9
Carub.0004s0646 Capsella rubella HOM05D004857 ORTHO05D005663 1.9e-07 59.7 53 49.1
MD02G1102700 Malus domestica HOM05D004857 ORTHO05D005663 1.9e-07 59.7 61 49.2
AL4G19270 Arabidopsis lyrata HOM05D004857 ORTHO05D005663 2.5e-07 59.3 51 51.0
arahy.Tifrunner.gnm1.ann1.N9ATPP Arachis hypogaea HOM05D004857 ORTHO05D005663 2.5e-07 59.3 53 54.7
Glyma.09G074100 Glycine max HOM05D004857 ORTHO05D005663 2.5e-07 59.3 53 50.9
Glyma.15G183100 Glycine max HOM05D004857 ORTHO05D005663 2.5e-07 59.3 53 50.9
HanXRQChr12g0355211 Helianthus annuus HOM05D004857 ORTHO05D005663 2.5e-07 59.3 29 86.2
Lalb_Chr08g0232851 Lupinus albus HOM05D004857 ORTHO05D005663 2.5e-07 59.3 53 49.1
MD15G1223900 Malus domestica HOM05D004857 ORTHO05D005663 2.5e-07 59.3 51 52.9
Nn7g37725 Nelumbo nucifera HOM05D004857 ORTHO05D005663 2.5e-07 59.3 63 46.0
Oeu041809.2 Olea europaea HOM05D004857 ORTHO05D005663 2.5e-07 59.3 53 52.8
Phvul.009G223400 Phaseolus vulgaris HOM05D004857 ORTHO05D005663 2.5e-07 59.3 53 50.9
Sp4g07340 Schrenkiella parvula HOM05D004857 ORTHO05D005663 2.5e-07 59.3 51 51.0
TAR383G0334 Trochodendron aralioides HOM05D004857 ORTHO05D005663 2.5e-07 59.3 53 50.9
VMungo1309G0172 Vigna mungo HOM05D004857 ORTHO05D005663 2.5e-07 59.3 53 50.9
Ca_02281_v3 Cicer arietinum L. HOM05D004857 ORTHO05D005663 3.3e-07 58.9 53 49.1
SGA_v2.0_scaffold31G12698 Striga asiatica HOM05D004857 ORTHO05D005663 4.3e-07 58.5 53 47.2
HPP92_017869 Vanilla planifolia HOM05D004857 ORTHO05D005663 4.3e-07 58.5 29 82.8
Actinidia30259 Actinidia chinensis HOM05D004857 ORTHO05D005663 5.7e-07 58.2 63 47.6
BcaC07g40818 Brassica carinata HOM05D004857 ORTHO05D005663 5.7e-07 58.2 51 49.0
A09p55180 Brassica napus HOM05D004857 ORTHO05D005663 5.7e-07 58.2 51 49.0
C08p38110 Brassica napus HOM05D004857 ORTHO05D005663 5.7e-07 58.2 51 49.0
BolC8t51386H Brassica oleracea HOM05D004857 ORTHO05D005663 5.7e-07 58.2 51 49.0
BraA09t40926Z Brassica rapa HOM05D004857 ORTHO05D005663 5.7e-07 58.2 51 49.0
Peaxi162Scf01184g10017 Petunia axillaris HOM05D004857 ORTHO05D005663 5.7e-07 58.2 29 79.3
CARHR114530 Cardamine hirsuta HOM05D004857 ORTHO05D005663 7.4e-07 57.8 53 45.3
Manes.16G090200 Manihot esculenta HOM05D004857 ORTHO05D005663 7.4e-07 57.8 63 47.6
Oeu000275.2 Olea europaea HOM05D004857 ORTHO05D005663 7.4e-07 57.8 39 66.7
arahy.Tifrunner.gnm1.ann1.N970BB Arachis hypogaea HOM05D004857 ORTHO05D005663 9.7e-07 57.4 53 52.8
BcaB08g35308 Brassica carinata HOM05D004857 ORTHO05D005663 9.7e-07 57.4 29 75.9
BcaB08g35315 Brassica carinata HOM05D004857 ORTHO05D005663 9.7e-07 57.4 29 75.9
ECA247G2383 Erigeron canadensis HOM05D004857 ORTHO05D005663 9.7e-07 57.4 29 79.3
Medtr2g044200 Medicago truncatula HOM05D004857 ORTHO05D005663 9.7e-07 57.4 53 52.8
QL11p002992 Quercus lobata HOM05D004857 ORTHO05D005663 9.7e-07 57.4 53 50.9
Rhsim05G0001900 Rhododendron simsii HOM05D004857 ORTHO05D005663 9.7e-07 57.4 53 52.8
Aqoxy6G02713 Aquilegia oxysepala HOM05D004857 ORTHO05D005663 1.3e-06 57.0 39 66.7
CSS0030162 Camellia sinensis var. sinensis HOM05D004857 ORTHO05D005663 1.3e-06 57.0 63 47.6
Cpa.g.sc3709.1 Carica papaya HOM05D004857 ORTHO05D005663 1.3e-06 57.0 39 69.2
CDE05G0310 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 1.3e-06 57.0 63 44.4
AagrBONN_evm.TU.Sc2ySwM_344.4798 Anthoceros agrestis HOM05D004857 ORTHO05D005663 1.6e-06 56.6 32 75.0
MBI19_g37995_MAGBIO Magnolia biondii HOM05D004857 ORTHO05D005663 1.6e-06 56.6 29 79.3
Prupe.7G191600 Prunus persica HOM05D004857 ORTHO05D005663 1.6e-06 56.6 61 49.2
Psat1g138640 Pisum sativum HOM05D004857 ORTHO05D005663 2.2e-06 56.2 53 49.1
PGR142G2122 Punica granatum HOM05D004857 ORTHO05D005663 2.2e-06 56.2 39 64.1
CDE05G0890 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 2.8e-06 55.8 63 44.4
Mapoly0117s0005 Marchantia polymorpha HOM05D004857 ORTHO05D005663 2.8e-06 55.8 51 49.0
MELO3C009580.2 Cucumis melo HOM05D004857 ORTHO05D005663 3.7e-06 55.5 53 47.2
CsaV3_3G038370 Cucumis sativus L. HOM05D004857 ORTHO05D005663 3.7e-06 55.5 53 47.2
Os11g0146700 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 4.8e-06 55.1 53 49.1
Pp3c19_4680 Physcomitrium patens HOM05D004857 ORTHO05D005663 4.8e-06 55.1 51 49.0
TPR.G27074 Trifolium pratense HOM05D004857 ORTHO05D005663 4.8e-06 55.1 53 50.9
Zm00001eb405000 Zea mays HOM05D004857 ORTHO05D005663 8.2e-06 54.3 29 72.4


User provided reference genes

Program Settings