Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 2.1e-106 389.0 200 100.0
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.2e-85 320.1 182 92.3
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 1.3e-55 220.3 182 62.6
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 1.5e-54 216.9 182 62.1
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 4.2e-54 215.3 182 61.0
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 9.4e-54 214.2 182 59.9
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 8.8e-52 207.6 196 54.6
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.2e-51 207.2 182 59.3
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.2e-51 207.2 182 59.3
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 1.2e-51 207.2 189 55.6
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 2.6e-51 206.1 182 57.1
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 9.8e-51 204.1 182 55.5
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 1.3e-50 203.8 182 56.6
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.7e-50 203.4 182 57.7
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 2.2e-50 203.0 182 55.5
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 3.7e-50 202.2 172 60.5
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 4.8e-50 201.8 184 56.0
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 7.0e-49 198.0 182 56.0
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 2.7e-48 196.1 182 54.9
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 5.9e-48 194.9 182 54.9
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 5.9e-48 194.9 182 56.6
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 5.9e-48 194.9 181 56.4
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.0e-47 194.1 182 55.5
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 1.3e-47 193.7 196 51.0
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 1.7e-47 193.4 182 55.5
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 2.3e-47 193.0 182 55.5
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 3.8e-47 192.2 182 54.9
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 3.8e-47 192.2 182 53.3
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 3.8e-47 192.2 197 51.3
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 5.0e-47 191.8 189 52.4
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 6.5e-47 191.4 183 54.1
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 6.5e-47 191.4 182 52.7
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 6.5e-47 191.4 182 52.7
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 8.6e-47 191.0 182 54.4
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 8.6e-47 191.0 182 54.4
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 8.6e-47 191.0 182 54.4
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 1.1e-46 190.7 182 55.5
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 1.1e-46 190.7 182 52.2
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 1.1e-46 190.7 201 49.8
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 1.5e-46 190.3 182 52.7
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.5e-46 190.3 182 54.9
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 1.5e-46 190.3 189 50.8
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 1.9e-46 189.9 173 55.5
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 1.9e-46 189.9 189 53.4
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 2.5e-46 189.5 182 54.4
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 2.5e-46 189.5 182 53.8
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 2.5e-46 189.5 182 53.8
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 2.5e-46 189.5 182 53.8
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 4.2e-46 188.7 182 54.4
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 4.2e-46 188.7 189 50.3
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 5.5e-46 188.3 190 51.6
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 7.2e-46 188.0 182 52.2
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 9.5e-46 187.6 182 55.5
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 1.6e-45 186.8 182 56.0
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 2.1e-45 186.4 182 53.3
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 2.1e-45 186.4 182 52.2
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 2.8e-45 186.0 173 51.4
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 3.6e-45 185.7 150 62.0
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 4.7e-45 185.3 182 53.8
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 3.0e-44 182.6 186 53.8
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 4.0e-44 182.2 188 48.9
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 4.0e-44 182.2 183 53.6
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 8.9e-44 181.0 186 53.2
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 1.2e-43 180.6 182 50.5
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.5e-43 180.3 182 52.2
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 5.7e-43 178.3 183 50.8
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 7.5e-43 177.9 185 50.8
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 9.8e-43 177.6 182 53.3
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 1.3e-42 177.2 183 51.4
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 2.2e-42 176.4 182 52.2
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 1.4e-41 173.7 182 51.6
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 1.8e-41 173.3 182 50.5
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 4.1e-41 172.2 182 49.5
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 4.1e-41 172.2 182 51.1
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 7.0e-41 171.4 182 51.1
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 9.2e-41 171.0 143 59.4
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.2e-40 170.6 183 49.7
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 2.0e-40 169.9 182 50.0
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 2.0e-40 169.9 252 40.1
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 2.0e-40 169.9 182 51.1
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 2.7e-40 169.5 182 48.9
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 2.7e-40 169.5 179 48.0
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 2.7e-40 169.5 179 48.0
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 7.8e-40 167.9 184 50.0
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.0e-39 167.5 182 48.4
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 1.3e-39 167.2 196 50.0
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.7e-39 166.8 182 50.5
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 1.7e-39 166.8 149 57.7
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 2.3e-39 166.4 182 48.4
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 6.6e-39 164.9 183 47.5
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 8.6e-39 164.5 182 50.0
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.9e-38 163.3 183 49.7
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 4.0e-36 155.6 158 50.0
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 4.9e-34 148.7 153 51.0
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 3.2e-33 146.0 142 53.5
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 3.9e-31 139.0 232 38.8
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 9.5e-30 134.4 130 54.6
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 6.8e-28 128.3 167 41.9
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 8.9e-28 127.9 136 50.0
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.7e-26 123.6 172 43.6
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 2.2e-26 123.2 182 39.0
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.9e-25 120.2 137 49.6
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 4.1e-25 119.0 168 36.9
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 5.4e-25 118.6 169 38.5
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 6.0e-24 115.2 137 47.4
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.1e-21 106.7 168 31.0
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.4e-20 104.0 165 38.8
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 2.3e-20 103.2 168 31.0
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 2.9e-18 96.3 126 44.4
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 4.1e-17 92.4 152 36.2
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.3e-15 87.4 49 75.5
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 2.3e-15 86.7 46 78.3
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 4.1e-09 65.9 38 76.3
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 6.0e-08 62.0 171 28.1
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 7.8e-08 61.6 57 52.6
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 8.7e-07 58.2 75 44.0
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 7.3e-06 55.1 80 32.5


User provided reference genes

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