Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO513G0179 Papaver somniferum HOM05D001988 ORTHO05D004985 6.4e-210 733.8 363 100.0
PSO063G4641 Papaver somniferum HOM05D001988 ORTHO05D004985 5.3e-87 325.5 488 43.6
PSO017G3571 Papaver somniferum HOM05D001988 ORTHO05D004985 1.3e-74 284.3 457 41.1
GSVIVG01019982001 Vitis vinifera HOM05D001988 ORTHO05D004985 8.8e-50 201.8 443 32.1
PGR102G2417 Punica granatum HOM05D001988 ORTHO05D004985 2.4e-47 193.7 478 29.9
Lj8A318G47 Lonicera japonica HOM05D001988 ORTHO05D004985 3.5e-46 189.9 472 30.3
TAR629G1399 Trochodendron aralioides HOM05D001988 ORTHO05D004985 5.9e-46 189.1 520 29.0
Aqoxy1G01101 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 1.5e-44 184.5 545 28.1
Prupe.1G174900 Prunus persica HOM05D001988 ORTHO05D004985 3.6e-43 179.9 511 28.2
Lsat_1_v5_gn_4_55321 Lactuca sativa HOM05D001988 ORTHO05D004985 1.8e-42 177.6 494 28.5
MD04G1025400 Malus domestica HOM05D001988 ORTHO05D004985 1.8e-42 177.6 529 27.4
ECA248G0899 Erigeron canadensis HOM05D001988 ORTHO05D004985 2.3e-42 177.2 471 29.1
Actinidia19875 Actinidia chinensis HOM05D001988 ORTHO05D004985 4.0e-42 176.4 511 28.0
Cpa.g.sc128.24 Carica papaya HOM05D001988 ORTHO05D004985 4.0e-42 176.4 508 27.4
HanXRQChr09g0255131 Helianthus annuus HOM05D001988 ORTHO05D004985 1.5e-41 174.5 470 30.0
vmacro01260 Vaccinium macrocarpon HOM05D001988 ORTHO05D004985 1.5e-41 174.5 522 28.7
Eucgr.B03445 Eucalyptus grandis HOM05D001988 ORTHO05D004985 2.0e-41 174.1 528 27.8
HanXRQChr05g0145521 Helianthus annuus HOM05D001988 ORTHO05D004985 5.7e-41 172.6 447 30.2
ECA234G0637 Erigeron canadensis HOM05D001988 ORTHO05D004985 7.5e-41 172.2 436 29.6
Rhsim12G0063800 Rhododendron simsii HOM05D001988 ORTHO05D004985 7.5e-41 172.2 509 28.1
AL6G52060 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 1.7e-40 171.0 449 29.8
BolC8t52776H Brassica oleracea HOM05D001988 ORTHO05D004985 2.8e-40 170.2 462 29.2
Lsat_1_v5_gn_5_156781 Lactuca sativa HOM05D001988 ORTHO05D004985 2.8e-40 170.2 518 27.4
Lsat_1_v5_gn_8_100701 Lactuca sativa HOM05D001988 ORTHO05D004985 3.7e-40 169.9 488 27.0
BraA09t42140Z Brassica rapa HOM05D001988 ORTHO05D004985 4.8e-40 169.5 462 29.4
Migut.I00421 Erythranthe guttata HOM05D001988 ORTHO05D004985 4.8e-40 169.5 406 28.8
AT2G02955 Arabidopsis thaliana HOM05D001988 ORTHO05D004985 8.3e-40 168.7 479 28.6
Cfa008981 Carpinus fangiana HOM05D001988 ORTHO05D004985 1.1e-39 168.3 516 26.7
QL03p063402 Quercus lobata HOM05D001988 ORTHO05D004985 1.4e-39 167.9 515 27.8
QL03p064038 Quercus lobata HOM05D001988 ORTHO05D004985 1.4e-39 167.9 515 27.8
A09p68050 Brassica napus HOM05D001988 ORTHO05D004985 1.8e-39 167.5 463 29.6
Aa31LG2G7390 Aethionema arabicum HOM05D001988 ORTHO05D004985 4.1e-39 166.4 473 28.8
Psat7g139200 Pisum sativum HOM05D001988 ORTHO05D004985 4.1e-39 166.4 486 27.0
Solyc09g007120.4 Solanum lycopersicum HOM05D001988 ORTHO05D004985 5.3e-39 166.0 466 30.3
THA.LOC104805159 Tarenaya hassleriana HOM05D001988 ORTHO05D004985 5.3e-39 166.0 507 27.8
AL5G12570 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 1.2e-38 164.9 491 28.3
C08p52490 Brassica napus HOM05D001988 ORTHO05D004985 1.2e-38 164.9 463 28.7
CiPaw.05G135300 Carya illinoinensis HOM05D001988 ORTHO05D004985 1.2e-38 164.9 516 27.1
Manes.01G185700 Manihot esculenta HOM05D001988 ORTHO05D004985 1.6e-38 164.5 516 27.1
TWI53G0339 Tripterygium wilfordii HOM05D001988 ORTHO05D004985 3.5e-38 163.3 457 28.4
BcaC07g42212 Brassica carinata HOM05D001988 ORTHO05D004985 4.5e-38 162.9 437 29.1
Sopen09g001990 Solanum pennellii HOM05D001988 ORTHO05D004985 4.5e-38 162.9 458 30.6
vmacro01166 Vaccinium macrocarpon HOM05D001988 ORTHO05D004985 1.3e-37 161.4 505 26.9
ClCG11G010950 Citrullus lanatus HOM05D001988 ORTHO05D004985 1.7e-37 161.0 492 26.8
Carub.0005s0183 Capsella rubella HOM05D001988 ORTHO05D004985 2.2e-37 160.6 489 28.0
Medtr4g071660 Medicago truncatula HOM05D001988 ORTHO05D004985 2.2e-37 160.6 454 27.5
Lj3g0010541 Lotus japonicus HOM05D001988 ORTHO05D004985 1.1e-36 158.3 501 25.9
Sp7g05500 Schrenkiella parvula HOM05D001988 ORTHO05D004985 1.1e-36 158.3 475 27.6
CANSAT54G1389 Cannabis sativa HOM05D001988 ORTHO05D004985 1.5e-36 157.9 506 26.1
Oeu037938.2 Olea europaea HOM05D001988 ORTHO05D004985 1.5e-36 157.9 468 28.6
Glyma.11G111300 Glycine max HOM05D001988 ORTHO05D004985 1.9e-36 157.5 478 26.4
Medtr4g057650 Medicago truncatula HOM05D001988 ORTHO05D004985 2.5e-36 157.1 468 26.9
TPR.G27077 Trifolium pratense HOM05D001988 ORTHO05D004985 2.5e-36 157.1 459 27.0
Ciclev10030768m.g Citrus clementina HOM05D001988 ORTHO05D004985 3.2e-36 156.8 507 27.4
VMungo1127G0715 Vigna mungo HOM05D001988 ORTHO05D004985 3.2e-36 156.8 504 25.2
arahy.Tifrunner.gnm1.ann1.41IR6N Arachis hypogaea HOM05D001988 ORTHO05D004985 4.2e-36 156.4 528 25.8
CAN.G439.30 Capsicum annuum HOM05D001988 ORTHO05D004985 4.2e-36 156.4 452 28.8
PGSC0003DMG401018705 Solanum tuberosum HOM05D001988 ORTHO05D004985 5.5e-36 156.0 464 28.4
SGA_v2.0_scaffold58G20462 Striga asiatica HOM05D001988 ORTHO05D004985 7.2e-36 155.6 443 28.9
arahy.Tifrunner.gnm1.ann1.AY0VQT Arachis hypogaea HOM05D001988 ORTHO05D004985 1.6e-35 154.5 528 25.0
MELO3C008752.2 Cucumis melo HOM05D001988 ORTHO05D004985 1.6e-35 154.5 494 26.3
CsaV3_2G009530 Cucumis sativus L. HOM05D001988 ORTHO05D004985 1.6e-35 154.5 485 26.4
arahy.Tifrunner.gnm1.ann1.8UN484 Arachis hypogaea HOM05D001988 ORTHO05D004985 2.1e-35 154.1 528 25.6
Ca_20931_v3 Cicer arietinum L. HOM05D001988 ORTHO05D004985 2.1e-35 154.1 513 25.3
Sopen11g029230 Solanum pennellii HOM05D001988 ORTHO05D004985 2.1e-35 154.1 464 27.8
Solyc11g071540.2 Solanum lycopersicum HOM05D001988 ORTHO05D004985 4.7e-35 152.9 464 28.0
Migut.F02100 Erythranthe guttata HOM05D001988 ORTHO05D004985 8.0e-35 152.1 431 28.1
Gohir.D05G304800 Gossypium hirsutum HOM05D001988 ORTHO05D004985 8.0e-35 152.1 530 26.6
Gorai.009G324500 Gossypium raimondii HOM05D001988 ORTHO05D004985 8.0e-35 152.1 530 26.6
Ah.05g179340 Amaranthus hybridus HOM05D001988 ORTHO05D004985 1.0e-34 151.8 507 26.2
Eucgr.B03444 Eucalyptus grandis HOM05D001988 ORTHO05D004985 1.0e-34 151.8 441 27.7
Phvul.011G039300 Phaseolus vulgaris HOM05D001988 ORTHO05D004985 1.4e-34 151.4 504 25.2
SalBow1G3615 Salvia bowleyana HOM05D001988 ORTHO05D004985 2.3e-34 150.6 479 27.8
Sabra10G0129300 Salix brachista HOM05D001988 ORTHO05D004985 3.0e-34 150.2 489 26.4
AUR62005788 Chenopodium quinoa HOM05D001988 ORTHO05D004985 4.0e-34 149.8 520 26.2
Thhalv10027666m.g Eutrema salsugineum HOM05D001988 ORTHO05D004985 4.0e-34 149.8 459 28.3
MBI19_g09828_MAGBIO Magnolia biondii HOM05D001988 ORTHO05D004985 4.0e-34 149.8 565 24.8
Nn4g23157 Nelumbo nucifera HOM05D001988 ORTHO05D004985 1.5e-33 147.9 506 24.5
Duzib251G0871 Durio zibethinus HOM05D001988 ORTHO05D004985 3.4e-33 146.7 510 25.9
CARHR145370 Cardamine hirsuta HOM05D001988 ORTHO05D004985 4.4e-33 146.4 461 27.8
EL10Ac6g13205 Beta vulgaris HOM05D001988 ORTHO05D004985 5.7e-33 146.0 509 25.1
Lalb_Chr14g0368981 Lupinus albus HOM05D001988 ORTHO05D004985 9.8e-33 145.2 483 24.6
Cc09_g03970 Coffea canephora HOM05D001988 ORTHO05D004985 1.3e-32 144.8 511 26.8
SHI13475 Sapria himalayana HOM05D001988 ORTHO05D004985 6.3e-32 142.5 449 26.1
MSTRG.27418 Avicennia marina HOM05D001988 ORTHO05D004985 1.4e-31 141.4 483 25.9
Medtr5g067430 Medicago truncatula HOM05D001988 ORTHO05D004985 1.4e-31 141.4 440 27.3
TPR.G16225 Trifolium pratense HOM05D001988 ORTHO05D004985 1.8e-31 141.0 450 26.2
FAN21G2649 Fragaria x ananassa HOM05D001988 ORTHO05D004985 2.4e-31 140.6 515 25.0
Hund05880 Selenicereus undatus HOM05D001988 ORTHO05D004985 2.4e-31 140.6 540 24.8
Peaxi162Scf00217g00713 Petunia axillaris HOM05D001988 ORTHO05D004985 3.1e-31 140.2 503 26.4
Nitab4.5_0007649g0010 Nicotiana tabacum HOM05D001988 ORTHO05D004985 7.0e-31 139.0 499 26.3
FAN25G3456 Fragaria x ananassa HOM05D001988 ORTHO05D004985 9.1e-31 138.7 479 25.7
FAN25G3604 Fragaria x ananassa HOM05D001988 ORTHO05D006298 9.1e-31 138.7 479 25.7
FvH4_3g26291 Fragaria vesca HOM05D001988 ORTHO05D004985 1.2e-30 138.3 479 25.5
AUR62028773 Chenopodium quinoa HOM05D001988 ORTHO05D004985 2.7e-30 137.1 511 26.2
Thecc.02G346500 Theobroma cacao HOM05D001988 ORTHO05D004985 2.7e-30 137.1 538 25.3
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 4.5e-30 136.3 479 25.3
CDE07G0941 Ceratophyllum demersum HOM05D001988 ORTHO05D004985 3.8e-29 133.3 508 24.2
Gohir.A05G183600 Gossypium hirsutum HOM05D001988 ORTHO05D004985 1.9e-28 131.0 508 25.6
CSS0030030 Camellia sinensis var. sinensis HOM05D001988 ORTHO05D004985 2.5e-28 130.6 261 31.8
Zm00001eb284870 Zea mays HOM05D001988 ORTHO05D004985 2.5e-28 130.6 437 25.4
Nitab4.5_0000428g0180 Nicotiana tabacum HOM05D001988 ORTHO05D004985 3.3e-28 130.2 483 25.5
Atru.chr11.1785 Acer truncatum HOM05D001988 ORTHO05D004985 1.2e-27 128.3 258 34.5
Sc11g0001930 Simmondsia chinensis HOM05D001988 ORTHO05D004985 4.7e-27 126.3 450 25.6
EL10Ac9g22126 Beta vulgaris HOM05D001988 ORTHO05D004985 6.1e-27 125.9 553 23.0
Carub.0006s3640 Capsella rubella HOM05D001988 ORTHO05D004985 1.8e-26 124.4 461 26.2
Peaxi162Scf00342g00711 Petunia axillaris HOM05D001988 ORTHO05D004985 1.5e-25 121.3 279 32.6
unitig_60.g25620 Utricularia gibba HOM05D001988 ORTHO05D004985 3.4e-25 120.2 439 24.4
Potri.010G169500 Populus trichocarpa HOM05D001988 ORTHO05D004985 2.2e-24 117.5 225 33.3
Aqoxy5G02834 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 1.1e-23 115.2 117 46.2
Hund25598 Selenicereus undatus HOM05D001988 ORTHO05D004985 1.1e-23 115.2 186 37.6
Hma1.2p1_0265F.1_g106750 Hydrangea macrophylla HOM05D001988 ORTHO05D004985 3.1e-23 113.6 109 51.4
HPP92_021577 Vanilla planifolia HOM05D001988 ORTHO05D004985 9.2e-23 112.1 488 24.4
DCAR_007151 Daucus carota HOM05D001988 ORTHO05D004985 1.7e-21 107.8 186 34.9
Sed0003814 Sechium edule HOM05D001988 ORTHO05D004985 2.3e-21 107.5 236 30.9
Thhalv10004418m.g Eutrema salsugineum HOM05D001988 ORTHO05D004985 2.9e-21 107.1 108 49.1
Dinv16646 Davidia involucrata HOM05D001988 ORTHO05D004985 1.1e-20 105.1 110 49.1
Haze_12013 Corylus avellana HOM05D001988 ORTHO05D004985 1.5e-20 104.8 92 54.3
COL.COLO4_23013 Corchorus olitorius HOM05D001988 ORTHO05D004985 2.5e-20 104.0 136 41.2
ATR0782G208 Amborella trichopoda HOM05D001988 ORTHO05D004985 8.0e-19 99.0 197 32.5
CARHR212720 Cardamine hirsuta HOM05D001988 ORTHO05D004985 1.0e-18 98.6 188 35.1
RcHm_v2.0_Chr7g0220011 Rosa chinensis HOM05D001988 ORTHO05D004985 3.1e-18 97.1 89 50.6
AUR62008859 Chenopodium quinoa HOM05D001988 ORTHO05D004985 2.6e-17 94.0 95 46.3
RcHm_v2.0_Chr5g0048631 Rosa chinensis HOM05D001988 ORTHO05D004985 2.6e-17 94.0 86 50.0
Atru.chr11.1786 Acer truncatum HOM05D001988 ORTHO05D004985 1.3e-16 91.7 96 53.1
SEGI_17598 Sequoiadendron giganteum HOM05D001988 ORTHO05D004985 1.3e-16 91.7 482 21.8
RcHm_v2.0_Chr5g0048641 Rosa chinensis HOM05D001988 ORTHO05D004985 3.2e-15 87.0 112 40.2
Oeu007681.1 Olea europaea HOM05D001988 ORTHO05D004985 1.6e-14 84.7 75 57.3
SEGI_28471 Sequoiadendron giganteum HOM05D001988 ORTHO05D004985 1.3e-13 81.6 77 50.6
RcHm_v2.0_Chr7g0220021 Rosa chinensis HOM05D001988 ORTHO05D004985 1.7e-13 81.3 112 39.3
Pp3c9_8400 Physcomitrium patens HOM05D001988 ORTHO05D004985 5.0e-13 79.7 113 42.5
PGSC0003DMG400002020 Solanum tuberosum HOM05D001988 ORTHO05D004985 1.1e-10 72.0 67 55.2
AagrBONN_evm.TU.Sc2ySwM_117.2968 Anthoceros agrestis HOM05D001988 ORTHO05D004985 1.4e-10 71.6 93 39.8
AagrBONN_evm.TU.Sc2ySwM_362.1334 Anthoceros agrestis HOM05D001988 ORTHO05D004985 3.1e-10 70.5 141 33.3
AagrBONN_evm.TU.Sc2ySwM_369.75 Anthoceros agrestis HOM05D001988 ORTHO05D004985 2.0e-09 67.8 92 39.1
Mapoly0075s0087 Marchantia polymorpha HOM05D001988 ORTHO05D004985 2.0e-09 67.8 104 34.6
Hund25529 Selenicereus undatus HOM05D001988 ORTHO05D004985 2.4e-07 60.8 48 54.2


User provided reference genes

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