Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 1.9e-160 569.3 326 100.0
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 6.7e-158 560.8 327 99.1
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 9.5e-120 434.1 332 78.6
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 1.2e-119 433.7 325 78.2
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 6.8e-118 427.9 325 76.9
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 2.0e-117 426.4 324 78.4
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 3.1e-115 419.1 326 76.4
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 5.0e-113 411.8 323 76.8
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 8.6e-113 411.0 327 74.3
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 1.1e-112 410.6 323 75.9
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 2.5e-112 409.5 324 75.9
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 3.3e-112 409.1 324 75.9
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 7.3e-112 407.9 318 75.5
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 4.7e-111 405.2 326 75.5
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 4.7e-111 405.2 323 75.2
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 6.1e-111 404.8 323 74.0
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.3e-110 402.9 329 72.0
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 2.3e-110 402.9 324 74.4
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 8.9e-110 401.0 323 72.8
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 8.9e-110 401.0 324 74.1
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.5e-109 400.2 326 72.4
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.5e-109 400.2 323 73.4
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 1.5e-109 400.2 335 71.6
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 9.8e-109 397.5 323 72.8
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 1.7e-108 396.7 323 73.7
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 1.7e-108 396.7 326 72.7
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 1.7e-108 396.7 331 73.4
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 2.2e-108 396.4 323 73.7
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 2.2e-108 396.4 323 74.9
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 2.2e-108 396.4 323 73.1
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 3.7e-108 395.6 287 78.7
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 4.9e-108 395.2 323 72.8
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 4.9e-108 395.2 325 72.9
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 6.4e-108 394.8 328 72.3
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 1.1e-107 394.0 326 71.8
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 1.1e-107 394.0 324 72.5
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 1.4e-107 393.7 323 72.8
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 1.8e-107 393.3 324 72.8
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 1.8e-107 393.3 337 71.5
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 3.2e-107 392.5 323 73.4
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 4.1e-107 392.1 325 74.8
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 5.4e-107 391.7 328 74.4
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 5.4e-107 391.7 327 73.1
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 5.4e-107 391.7 324 72.5
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 7.0e-107 391.3 330 71.5
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 7.0e-107 391.3 324 73.5
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 9.2e-107 391.0 323 72.8
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 9.2e-107 391.0 327 72.8
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 9.2e-107 391.0 323 73.1
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 1.2e-106 390.6 328 73.2
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 1.2e-106 390.6 323 72.4
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 1.6e-106 390.2 329 70.5
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 1.6e-106 390.2 324 72.2
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 2.0e-106 389.8 323 71.2
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 3.5e-106 389.0 325 72.6
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 3.5e-106 389.0 325 72.6
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 4.6e-106 388.7 323 72.1
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 6.0e-106 388.3 323 72.8
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 1.0e-105 387.5 328 70.4
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 1.3e-105 387.1 326 71.5
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 1.3e-105 387.1 325 73.2
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 1.7e-105 386.7 275 80.7
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 2.3e-105 386.3 336 71.1
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 5.0e-105 385.2 327 71.9
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 5.0e-105 385.2 302 75.5
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 6.6e-105 384.8 254 85.8
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 8.6e-105 384.4 271 80.8
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.9e-104 383.3 326 72.7
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.9e-104 383.3 318 73.6
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 2.5e-104 382.9 306 74.5
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.5e-104 382.9 326 71.5
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 2.5e-104 382.9 325 73.2
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 3.3e-104 382.5 325 71.4
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 4.3e-104 382.1 327 71.6
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 4.3e-104 382.1 375 65.3
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 4.3e-104 382.1 326 71.8
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 5.6e-104 381.7 327 71.6
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 5.6e-104 381.7 302 73.5
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 7.3e-104 381.3 331 71.6
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 9.5e-104 380.9 323 71.8
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 9.5e-104 380.9 325 72.9
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 1.6e-103 380.2 325 70.8
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.1e-103 379.8 302 73.2
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 2.8e-103 379.4 329 70.2
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 2.8e-103 379.4 323 71.5
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 3.6e-103 379.0 327 70.6
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 4.7e-103 378.6 323 72.8
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 4.7e-103 378.6 327 70.6
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 4.7e-103 378.6 314 72.0
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 6.2e-103 378.3 324 70.4
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 6.2e-103 378.3 324 70.4
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 6.2e-103 378.3 323 71.2
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 6.2e-103 378.3 324 70.4
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 8.0e-103 377.9 329 70.2
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 1.8e-102 376.7 327 71.3
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 1.8e-102 376.7 327 71.3
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.8e-102 376.7 328 70.1
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 2.3e-102 376.3 324 69.4
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 2.3e-102 376.3 324 69.4
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 2.3e-102 376.3 336 69.3
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 4.0e-102 375.6 360 64.7
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 6.8e-102 374.8 324 70.1
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 8.9e-102 374.4 325 70.2
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.2e-101 374.0 255 74.9
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 1.5e-101 373.6 326 70.9
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.5e-101 373.6 328 69.8
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 2.6e-101 372.9 305 72.8
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 3.4e-101 372.5 273 78.4
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 3.4e-101 372.5 324 70.4
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 3.4e-101 372.5 324 70.1
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 4.4e-101 372.1 327 70.6
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 4.4e-101 372.1 297 74.7
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 5.8e-101 371.7 327 70.6
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 5.8e-101 371.7 327 70.6
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 5.8e-101 371.7 324 70.7
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 9.8e-101 370.9 318 72.0
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 1.3e-100 370.5 322 71.4
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 1.3e-100 370.5 324 70.1
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 1.3e-100 370.5 256 84.8
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 1.7e-100 370.2 319 70.2
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 2.2e-100 369.8 326 70.2
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 2.2e-100 369.8 325 70.2
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.9e-100 369.4 310 66.5
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 4.9e-100 368.6 323 69.3
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 1.1e-99 367.5 323 70.3
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.1e-99 367.5 326 68.4
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 4.1e-99 365.5 327 68.2
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 1.2e-98 364.0 323 69.7
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.0e-97 360.9 320 69.4
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 2.3e-97 359.8 319 69.0
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 6.6e-97 358.2 302 71.9
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.6e-96 355.1 304 72.4
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 5.6e-96 355.1 310 71.9
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 2.1e-95 353.2 324 69.1
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.1e-94 350.9 302 72.2
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 6.8e-94 348.2 303 70.0
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 8.9e-94 347.8 304 71.4
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 4.4e-93 345.5 268 73.5
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 8.3e-92 341.3 314 65.9
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 2.4e-91 339.7 315 65.7
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.6e-90 337.0 233 85.0
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 6.6e-89 331.6 226 85.0
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 6.2e-87 325.1 265 71.7
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 4.0e-86 322.4 226 82.3
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 7.6e-85 318.2 323 56.3
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 6.4e-84 315.1 308 67.5
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 6.4e-84 315.1 267 64.8
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 7.8e-82 308.1 336 62.2
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 1.3e-81 307.4 254 62.2
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.2e-79 300.8 272 64.3
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 1.2e-77 294.3 323 61.0
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 1.2e-77 294.3 323 61.0
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 4.4e-77 292.4 357 57.1
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 9.3e-75 284.6 250 58.4
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 7.8e-74 281.6 249 70.3
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 3.9e-73 279.3 255 71.0
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 3.9e-73 279.3 196 83.7
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.5e-72 277.3 282 57.8
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 8.4e-68 261.5 248 71.0
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.9e-64 250.4 241 68.9
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 1.8e-54 217.2 265 49.4
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 5.3e-54 215.7 268 44.0
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 3.4e-53 213.0 144 73.6
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 8.4e-52 208.4 120 85.0
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.2e-47 193.7 120 78.3
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 2.6e-45 186.8 144 67.4
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.9e-40 170.6 196 65.3
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.1e-38 163.3 209 59.8
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.2e-36 157.1 133 61.7
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 1.8e-33 147.5 96 74.0
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 7.4e-32 142.1 94 73.4
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 1.3e-31 141.4 144 56.9
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.1e-30 136.7 256 37.9
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 5.0e-28 129.4 108 71.3
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 2.6e-24 117.1 77 74.0
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 1.2e-16 91.7 139 52.5
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 2.6e-16 90.5 107 64.5
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 2.4e-14 84.0 83 75.9
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 2.7e-13 80.5 146 40.4
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 2.9e-12 77.0 140 52.1
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 3.0e-09 67.0 88 44.3
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 1.3e-07 61.6 110 32.7


User provided reference genes

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